RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 SMIM1B2RUZ4 78 aa10.56□□□□□ -0.72
SCLT1-205ENST00000503401 ZNF22P17026 224 aaPredicted RBP10.55□□□□□ -0.72
SCLT1-205ENST00000503401 UNQ6190/PRO20217Q6UXQ8 127 aa10.55□□□□□ -0.72
SCLT1-205ENST00000503401 SCXQ7RTU7 201 aa10.55□□□□□ -0.72
SCLT1-205ENST00000503401 TRAV12-1A0A0B4J245 112 aa10.55□□□□□ -0.72
SCLT1-205ENST00000503401 NDUFA1O15239 70 aa10.55□□□□□ -0.72
SCLT1-205ENST00000503401 PRSS2P07478 247 aa10.55□□□□□ -0.72
SCLT1-205ENST00000503401 MRPL35Q9NZE8 188 aaKnown RBP10.55□□□□□ -0.72
SCLT1-205ENST00000503401 HSPB8Q9UJY1 196 aa10.55□□□□□ -0.72
SCLT1-205ENST00000503401 IGKV2-24A0A0C4DH68 120 aa10.54□□□□□ -0.72
SCLT1-205ENST00000503401 SMR3BP02814 79 aaPredicted RBP10.54□□□□□ -0.72
SCLT1-205ENST00000503401 Q8IZM0 81 aa10.53□□□□□ -0.72
SCLT1-205ENST00000503401 CIRBP-AS1Q8TBR5 109 aa10.53□□□□□ -0.72
SCLT1-205ENST00000503401 C6orf48Q9UBA6 75 aa10.53□□□□□ -0.72
SCLT1-205ENST00000503401 A0A096LNI7 61 aa10.52□□□□□ -0.73
SCLT1-205ENST00000503401 H3BRM9 83 aa10.52□□□□□ -0.73
SCLT1-205ENST00000503401 C6orf226Q5I0X4 101 aa10.52□□□□□ -0.73
SCLT1-205ENST00000503401 TMEM170BQ5T4T1 132 aa10.52□□□□□ -0.73
SCLT1-205ENST00000503401 F8VRH5 84 aa10.51□□□□□ -0.73
SCLT1-205ENST00000503401 ODF1Q14990 250 aa10.51□□□□□ -0.73
SCLT1-205ENST00000503401 PCP4L1A6NKN8 68 aa10.51□□□□□ -0.73
SCLT1-205ENST00000503401 F8WDY8 70 aa10.51□□□□□ -0.73
SCLT1-205ENST00000503401 CKS1BP61024 79 aa10.51□□□□□ -0.73
SCLT1-205ENST00000503401 COX7B2Q8TF08 81 aa10.51□□□□□ -0.73
SCLT1-205ENST00000503401 DPH3Q96FX2 82 aa10.51□□□□□ -0.73
SCLT1-205ENST00000503401 C12orf57Q99622 126 aa10.51□□□□□ -0.73
SCLT1-205ENST00000503401 GAGE2BQ13066 116 aa10.5□□□□□ -0.73
SCLT1-205ENST00000503401 CIRBPQ14011 172 aaKnown RBP10.5□□□□□ -0.73
SCLT1-205ENST00000503401 MAJINQ3KP22 176 aa10.5□□□□□ -0.73
SCLT1-205ENST00000503401 C9orf116Q5BN46 136 aaPredicted RBP10.5□□□□□ -0.73
SCLT1-205ENST00000503401 SPACA4Q8TDM5 124 aa10.5□□□□□ -0.73
SCLT1-205ENST00000503401 PMCHL2Q9BQD1 86 aa10.5□□□□□ -0.73
SCLT1-205ENST00000503401 LOC107984640A0A0U1RRK4 108 aa10.49□□□□□ -0.73
SCLT1-205ENST00000503401 C3orf79P0CE67 100 aa10.49□□□□□ -0.73
SCLT1-205ENST00000503401 RPL18AQ02543 176 aaKnown RBP10.49□□□□□ -0.73
SCLT1-205ENST00000503401 RNF151Q2KHN1 245 aa10.49□□□□□ -0.73
SCLT1-205ENST00000503401 MAP1LC3CQ9BXW4 147 aa10.48□□□□□ -0.73
SCLT1-205ENST00000503401 VPS13BQ7Z7G8 4022 aa10.48□□□□□ -0.73
SCLT1-205ENST00000503401 IGLV5-39A0A0G2JS06 123 aa10.47□□□□□ -0.73
SCLT1-205ENST00000503401 PTTG1IPP53801 180 aa10.47□□□□□ -0.73
SCLT1-205ENST00000503401 A0A087WYN8 130 aa10.47□□□□□ -0.73
SCLT1-205ENST00000503401 TRBV30A0A0K0K1B3 111 aa10.47□□□□□ -0.73
SCLT1-205ENST00000503401 SMIM6P0DI80 62 aa10.47□□□□□ -0.73
SCLT1-205ENST00000503401 Q8N1X5 172 aa10.47□□□□□ -0.73
SCLT1-205ENST00000503401 KRTAP4-5Q9BYR2 181 aa10.47□□□□□ -0.73
SCLT1-205ENST00000503401 SYS1-DBNDD2H3BUS1 97 aa10.46□□□□□ -0.74
SCLT1-205ENST00000503401 AKR1D1P51857 326 aa10.46□□□□□ -0.74
SCLT1-205ENST00000503401 Q6ZRP5 223 aa10.46□□□□□ -0.74
SCLT1-205ENST00000503401 TMEM223A0PJW6 202 aa10.45□□□□□ -0.74
SCLT1-205ENST00000503401 JOSD1Q15040 202 aaPredicted RBP10.45□□□□□ -0.74
SCLT1-205ENST00000503401 PKIGQ9Y2B9 76 aa10.45□□□□□ -0.74
SCLT1-205ENST00000503401 CXCL5P42830 114 aa10.44□□□□□ -0.74
SCLT1-205ENST00000503401 GAGE2EQ4V326 116 aa10.44□□□□□ -0.74
SCLT1-205ENST00000503401 PYY3Q5JQD4 70 aa10.44□□□□□ -0.74
SCLT1-205ENST00000503401 STPG4Q8N801 248 aa10.44□□□□□ -0.74
SCLT1-205ENST00000503401 GAGE2DQ9UEU5 116 aa10.44□□□□□ -0.74
SCLT1-205ENST00000503401 ABCA13Q86UQ4 5058 aa10.44□□□□□ -0.74
SCLT1-205ENST00000503401 KRTDAPP60985 99 aa10.44□□□□□ -0.74
SCLT1-205ENST00000503401 PET117Q6UWS5 81 aa10.44□□□□□ -0.74
SCLT1-205ENST00000503401 LINC00474Q9P2X8 69 aa10.44□□□□□ -0.74
SCLT1-205ENST00000503401 SRRM2Q9UQ35 2752 aaKnown RBP10.43□□□□□ -0.74
SCLT1-205ENST00000503401 DPM2O94777 84 aa10.43□□□□□ -0.74
SCLT1-205ENST00000503401 TLX1NBP0CAT3 122 aa10.43□□□□□ -0.74
SCLT1-205ENST00000503401 PLNP26678 52 aa10.43□□□□□ -0.74
SCLT1-205ENST00000503401 Q5VSD8 79 aa10.43□□□□□ -0.74
SCLT1-205ENST00000503401 LINC01545Q5VT33 79 aa10.43□□□□□ -0.74
SCLT1-205ENST00000503401 LINC00528Q8N1L1 170 aa10.43□□□□□ -0.74
SCLT1-205ENST00000503401 KRTAP3-3Q9BYR6 98 aa10.43□□□□□ -0.74
SCLT1-205ENST00000503401 KRTAP3-2Q9BYR7 98 aa10.43□□□□□ -0.74
SCLT1-205ENST00000503401 NDUFC2-KCTD14E9PQ53 114 aa10.42□□□□□ -0.74
SCLT1-205ENST00000503401 IGKCP01834 107 aa10.42□□□□□ -0.74
SCLT1-205ENST00000503401 PLAC8Q9NZF1 115 aa10.42□□□□□ -0.74
SCLT1-205ENST00000503401 EPM2AB3EWF7 344 aa10.4□□□□□ -0.74
SCLT1-205ENST00000503401 A0A1W2PNN7 141 aa10.4□□□□□ -0.75
SCLT1-205ENST00000503401 ZNF625Q96I27 306 aaPredicted RBP10.4□□□□□ -0.75
SCLT1-205ENST00000503401 FAM168BA1KXE4 195 aa10.39□□□□□ -0.75
SCLT1-205ENST00000503401 FAM229AH3BQW9 127 aa10.39□□□□□ -0.75
SCLT1-205ENST00000503401 C9orf129Q5T035 196 aaKnown RBP10.37□□□□□ -0.75
SCLT1-205ENST00000503401 XAGE1AQ9HD64 81 aa10.37□□□□□ -0.75
SCLT1-205ENST00000503401 PCLOQ9Y6V0 5065 aa10.36□□□□□ -0.75
SCLT1-205ENST00000503401 PFN2P35080 140 aa10.36□□□□□ -0.75
SCLT1-205ENST00000503401 TSPEAR-AS2P59090 65 aa10.36□□□□□ -0.75
SCLT1-205ENST00000503401 C20orf202A1L168 122 aa10.35□□□□□ -0.75
SCLT1-205ENST00000503401 SCGB1D1O95968 90 aa10.35□□□□□ -0.75
SCLT1-205ENST00000503401 LEPROTO15243 131 aa10.34□□□□□ -0.75
SCLT1-205ENST00000503401 HERVK_113P61574 105 aa10.34□□□□□ -0.75
SCLT1-205ENST00000503401 FAM19A5Q7Z5A7 132 aaPredicted RBP10.34□□□□□ -0.75
SCLT1-205ENST00000503401 ERG28Q9UKR5 140 aa10.34□□□□□ -0.75
SCLT1-205ENST00000503401 KRTAP7-1Q8IUC3 87 aa10.33□□□□□ -0.76
SCLT1-205ENST00000503401 NDUFA12Q9UI09 145 aa10.33□□□□□ -0.76
SCLT1-205ENST00000503401 J3QQQ9 107 aa10.32□□□□□ -0.76
SCLT1-205ENST00000503401 RPL37AP61513 92 aaKnown RBP10.32□□□□□ -0.76
SCLT1-205ENST00000503401 SFTA2Q6UW10 78 aa10.32□□□□□ -0.76
SCLT1-205ENST00000503401 PHF5AQ7RTV0 110 aaKnown RBP10.32□□□□□ -0.76
SCLT1-205ENST00000503401 PLEKHB2Q96CS7 222 aa10.32□□□□□ -0.76
SCLT1-205ENST00000503401 A0A0U1RRA0 63 aa10.31□□□□□ -0.76
SCLT1-205ENST00000503401 PLA2G1BP04054 148 aaKnown RBP10.31□□□□□ -0.76
SCLT1-205ENST00000503401 C7orf33Q8WU49 177 aa10.31□□□□□ -0.76
SCLT1-205ENST00000503401 KRTAP10-4P60372 401 aaPredicted RBP10.3□□□□□ -0.76
SCLT1-205ENST00000503401 SERTAD4-AS1Q5TG53 156 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms