RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 FAM19A1Q7Z5A9 133 aa3.35□□□□□ -1.87
NDFIP1-202ENST00000503388 DNAH17Q9UFH2 4485 aa3.35□□□□□ -1.87
NDFIP1-202ENST00000503388 ZFHX3Q15911 3703 aa3.35□□□□□ -1.87
NDFIP1-202ENST00000503388 PRB1P04280 392 aa3.35□□□□□ -1.87
NDFIP1-202ENST00000503388 SPATA3Q8NHX4 192 aa3.35□□□□□ -1.87
NDFIP1-202ENST00000503388 MED13LQ71F56 2210 aa3.35□□□□□ -1.87
NDFIP1-202ENST00000503388 TRRAPQ9Y4A5 3859 aa3.35□□□□□ -1.87
NDFIP1-202ENST00000503388 TSPEAR-AS2P59090 65 aa3.35□□□□□ -1.87
NDFIP1-202ENST00000503388 WFDC9Q8NEX5 89 aa3.35□□□□□ -1.87
NDFIP1-202ENST00000503388 hDV103S1A0JD37 113 aa3.34□□□□□ -1.87
NDFIP1-202ENST00000503388 CDSNQ15517 529 aa3.34□□□□□ -1.87
NDFIP1-202ENST00000503388 C20orf197Q8N268 126 aa3.34□□□□□ -1.87
NDFIP1-202ENST00000503388 DOPEY2Q9Y3R5 2298 aa3.34□□□□□ -1.87
NDFIP1-202ENST00000503388 A8MZ25 164 aa3.34□□□□□ -1.87
NDFIP1-202ENST00000503388 INAFM1C9JVW0 142 aa3.34□□□□□ -1.87
NDFIP1-202ENST00000503388 TP53AIP1Q9HCN2 124 aa3.34□□□□□ -1.87
NDFIP1-202ENST00000503388 GAS8-AS1O95177 125 aa3.34□□□□□ -1.88
NDFIP1-202ENST00000503388 CRYGAP11844 174 aa3.34□□□□□ -1.88
NDFIP1-202ENST00000503388 C10orf25Q5T742 122 aa3.34□□□□□ -1.88
NDFIP1-202ENST00000503388 C10orf99Q6UWK7 81 aa3.34□□□□□ -1.88
NDFIP1-202ENST00000503388 ENHOQ6UWT2 76 aa3.34□□□□□ -1.88
NDFIP1-202ENST00000503388 PRO0461Q9UI25 63 aa3.34□□□□□ -1.88
NDFIP1-202ENST00000503388 FAM208BQ5VWN6 2430 aa3.34□□□□□ -1.88
NDFIP1-202ENST00000503388 AGRNO00468 2067 aa3.34□□□□□ -1.88
NDFIP1-202ENST00000503388 NDUFS5O43920 106 aa3.33□□□□□ -1.88
NDFIP1-202ENST00000503388 REG3GQ6UW15 175 aa3.33□□□□□ -1.88
NDFIP1-202ENST00000503388 RPL37AP61513 92 aaKnown RBP3.33□□□□□ -1.88
NDFIP1-202ENST00000503388 LYPD5Q6UWN5 251 aa3.33□□□□□ -1.88
NDFIP1-202ENST00000503388 LINC00612Q8N6U2 182 aa3.33□□□□□ -1.88
NDFIP1-202ENST00000503388 LOC100996750A0A140TA64 210 aa3.33□□□□□ -1.88
NDFIP1-202ENST00000503388 C6orf223Q8N319 242 aa3.33□□□□□ -1.88
NDFIP1-202ENST00000503388 KRTAP4-6Q9BYQ5 205 aa3.33□□□□□ -1.88
NDFIP1-202ENST00000503388 ZFHX2Q9C0A1 2572 aaPredicted RBP3.33□□□□□ -1.88
NDFIP1-202ENST00000503388 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.33□□□□□ -1.88
NDFIP1-202ENST00000503388 C1orf137Q5JT78 98 aa3.32□□□□□ -1.88
NDFIP1-202ENST00000503388 PIEZO1Q92508 2521 aa3.32□□□□□ -1.88
NDFIP1-202ENST00000503388 ZFHX4Q86UP3 3567 aa3.32□□□□□ -1.88
NDFIP1-202ENST00000503388 H0Y9J4 135 aa3.32□□□□□ -1.88
NDFIP1-202ENST00000503388 ADAMTSL4-AS1Q5T5F5 129 aa3.32□□□□□ -1.88
NDFIP1-202ENST00000503388 HIGD2AQ9BW72 106 aa3.32□□□□□ -1.88
NDFIP1-202ENST00000503388 PLA2G2DQ9UNK4 145 aa3.32□□□□□ -1.88
NDFIP1-202ENST00000503388 IGLV4-60A0A075B6I1 120 aa3.32□□□□□ -1.88
NDFIP1-202ENST00000503388 K7ERS5 55 aa3.32□□□□□ -1.88
NDFIP1-202ENST00000503388 COX6A2Q02221 97 aa3.32□□□□□ -1.88
NDFIP1-202ENST00000503388 PRRC2AP48634 2157 aaKnown RBP3.31□□□□□ -1.88
NDFIP1-202ENST00000503388 HCG22E2RYF7 251 aa3.31□□□□□ -1.88
NDFIP1-202ENST00000503388 LINC00694P0DN24 101 aa3.31□□□□□ -1.88
NDFIP1-202ENST00000503388 UNQ6190/PRO20217Q6UXQ8 127 aa3.31□□□□□ -1.88
NDFIP1-202ENST00000503388 FAM30AQ9NZY2 134 aa3.31□□□□□ -1.88
NDFIP1-202ENST00000503388 ARHGAP32A7KAX9 2087 aa3.31□□□□□ -1.88
NDFIP1-202ENST00000503388 CSPG4Q6UVK1 2322 aa3.31□□□□□ -1.88
NDFIP1-202ENST00000503388 LIMD2Q9BT23 127 aa3.31□□□□□ -1.88
NDFIP1-202ENST00000503388 XAGE1AQ9HD64 81 aa3.31□□□□□ -1.88
NDFIP1-202ENST00000503388 LOC100131303A0A0U1RQF7 123 aa3.3□□□□□ -1.88
NDFIP1-202ENST00000503388 ELOF1P60002 83 aaKnown RBP3.3□□□□□ -1.88
NDFIP1-202ENST00000503388 CDIP1Q9H305 208 aa3.3□□□□□ -1.88
NDFIP1-202ENST00000503388 NOTCH3Q9UM47 2321 aa3.3□□□□□ -1.88
NDFIP1-202ENST00000503388 GOLGB1Q14789 3259 aaKnown RBP3.3□□□□□ -1.88
NDFIP1-202ENST00000503388 C18orf65Q6ZTR6 163 aa3.3□□□□□ -1.88
NDFIP1-202ENST00000503388 Q8N9L7 120 aa3.3□□□□□ -1.88
NDFIP1-202ENST00000503388 PLAC8L1A1L4L8 177 aa3.3□□□□□ -1.88
NDFIP1-202ENST00000503388 NAV2Q8IVL1 2488 aa3.3□□□□□ -1.88
NDFIP1-202ENST00000503388 Q6ZVQ6 151 aa3.3□□□□□ -1.88
NDFIP1-202ENST00000503388 LINC00337Q8N6G1 96 aa3.3□□□□□ -1.88
NDFIP1-202ENST00000503388 DEFB4AO15263 64 aa3.29□□□□□ -1.88
NDFIP1-202ENST00000503388 TLX1NBP0CAT3 122 aa3.29□□□□□ -1.88
NDFIP1-202ENST00000503388 DNAH10OSP0CZ25 163 aa3.29□□□□□ -1.88
NDFIP1-202ENST00000503388 Q6ZSN1 163 aa3.29□□□□□ -1.88
NDFIP1-202ENST00000503388 ESM1Q9NQ30 184 aa3.29□□□□□ -1.88
NDFIP1-202ENST00000503388 X6R8D5 127 aa3.29□□□□□ -1.88
NDFIP1-202ENST00000503388 A0A096LNT2 108 aa3.29□□□□□ -1.88
NDFIP1-202ENST00000503388 SLPIP03973 132 aa3.29□□□□□ -1.88
NDFIP1-202ENST00000503388 FAM19A5Q7Z5A7 132 aaPredicted RBP3.29□□□□□ -1.88
NDFIP1-202ENST00000503388 LITAFQ99732 161 aa3.28□□□□□ -1.88
NDFIP1-202ENST00000503388 UBR5O95071 2799 aaPredicted RBP3.28□□□□□ -1.88
NDFIP1-202ENST00000503388 SORL1Q92673 2214 aa3.28□□□□□ -1.88
NDFIP1-202ENST00000503388 A0A087WYN8 130 aa3.28□□□□□ -1.88
NDFIP1-202ENST00000503388 TRBV7-4A0A0J9YYF1 115 aa3.28□□□□□ -1.88
NDFIP1-202ENST00000503388 IGKV4-1P06312 121 aa3.28□□□□□ -1.88
NDFIP1-202ENST00000503388 LINC01547P58512 204 aaPredicted RBP3.28□□□□□ -1.88
NDFIP1-202ENST00000503388 ATRXP46100 2492 aa3.28□□□□□ -1.88
NDFIP1-202ENST00000503388 CASC2Q6XLA1 102 aa3.28□□□□□ -1.88
NDFIP1-202ENST00000503388 PRR34Q9NV39 138 aa3.28□□□□□ -1.88
NDFIP1-202ENST00000503388 CELA1Q9UNI1 258 aa3.28□□□□□ -1.88
NDFIP1-202ENST00000503388 CHD7Q9P2D1 2997 aa3.27□□□□□ -1.89
NDFIP1-202ENST00000503388 TLN1Q9Y490 2541 aaKnown RBP3.27□□□□□ -1.89
NDFIP1-202ENST00000503388 IGKV2-24A0A0C4DH68 120 aa3.27□□□□□ -1.89
NDFIP1-202ENST00000503388 IGLV6-57P01721 117 aa3.27□□□□□ -1.89
NDFIP1-202ENST00000503388 Q8N3U1 123 aa3.27□□□□□ -1.89
NDFIP1-202ENST00000503388 SPG11Q96JI7 2443 aa3.27□□□□□ -1.89
NDFIP1-202ENST00000503388 Q8NBF4 154 aa3.27□□□□□ -1.89
NDFIP1-202ENST00000503388 LINC00167Q96N53 147 aa3.27□□□□□ -1.89
NDFIP1-202ENST00000503388 TMEM254Q8TBM7 123 aa3.27□□□□□ -1.89
NDFIP1-202ENST00000503388 C8orf87E5RJ46 101 aa3.26□□□□□ -1.89
NDFIP1-202ENST00000503388 SMCPP49901 116 aaPredicted RBP3.26□□□□□ -1.89
NDFIP1-202ENST00000503388 Q6ZQT0 140 aa3.26□□□□□ -1.89
NDFIP1-202ENST00000503388 Q8NAQ8 132 aa3.26□□□□□ -1.89
NDFIP1-202ENST00000503388 CSNK1G2-AS1Q8NCQ2 148 aa3.26□□□□□ -1.89
NDFIP1-202ENST00000503388 LINC00846Q9NV44 126 aa3.26□□□□□ -1.89
NDFIP1-202ENST00000503388 WIPF1O43516 503 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms