RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 SMLR1H3BR10 107 aa2.72□□□□□ -1.97
NIPBL-203ENST00000503274 M0QY20 66 aa2.72□□□□□ -1.97
NIPBL-203ENST00000503274 SULT1A2P50226 295 aa2.72□□□□□ -1.97
NIPBL-203ENST00000503274 RPL37AP61513 92 aaKnown RBP2.72□□□□□ -1.97
NIPBL-203ENST00000503274 RBX1P62877 108 aa2.72□□□□□ -1.97
NIPBL-203ENST00000503274 CCL20P78556 96 aa2.72□□□□□ -1.97
NIPBL-203ENST00000503274 MEF2BQ02080 365 aaPredicted RBP2.72□□□□□ -1.97
NIPBL-203ENST00000503274 COTL1Q14019 142 aa2.72□□□□□ -1.97
NIPBL-203ENST00000503274 CENPWQ5EE01 88 aa2.72□□□□□ -1.97
NIPBL-203ENST00000503274 RASL11AQ6T310 242 aa2.72□□□□□ -1.97
NIPBL-203ENST00000503274 TEX261Q6UWH6 196 aa2.72□□□□□ -1.97
NIPBL-203ENST00000503274 C9orf163Q8N9P6 203 aa2.72□□□□□ -1.97
NIPBL-203ENST00000503274 DPH3P1Q9H4G8 78 aa2.72□□□□□ -1.97
NIPBL-203ENST00000503274 NIT2Q9NQR4 276 aa2.72□□□□□ -1.97
NIPBL-203ENST00000503274 MED9Q9NWA0 146 aa2.72□□□□□ -1.97
NIPBL-203ENST00000503274 PKIGQ9Y2B9 76 aa2.72□□□□□ -1.97
NIPBL-203ENST00000503274 IGHV3-64A0A075B6Q5 118 aa2.71□□□□□ -1.98
NIPBL-203ENST00000503274 IGLC6P0CF74 106 aa2.71□□□□□ -1.98
NIPBL-203ENST00000503274 NTF3P20783 257 aa2.71□□□□□ -1.98
NIPBL-203ENST00000503274 NKX2-5P52952 324 aaPredicted RBP2.71□□□□□ -1.98
NIPBL-203ENST00000503274 CNBPP62633 177 aaKnown RBP2.71□□□□□ -1.98
NIPBL-203ENST00000503274 AMMECR1LQ6DCA0 310 aa2.71□□□□□ -1.98
NIPBL-203ENST00000503274 CLPSL2Q6UWE3 100 aa2.71□□□□□ -1.98
NIPBL-203ENST00000503274 C9orf62Q8N4C0 152 aa2.71□□□□□ -1.98
NIPBL-203ENST00000503274 FAM210AQ96ND0 272 aa2.71□□□□□ -1.98
NIPBL-203ENST00000503274 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
NIPBL-203ENST00000503274 PKHD1L1Q86WI1 4243 aa2.7□□□□□ -1.98
NIPBL-203ENST00000503274 IGLV10-54A0A075B6I4 117 aa2.7□□□□□ -1.98
NIPBL-203ENST00000503274 IGHV3OR16-9A0A0B4J2B5 98 aa2.7□□□□□ -1.98
NIPBL-203ENST00000503274 RAB19A4D1S5 217 aa2.7□□□□□ -1.98
NIPBL-203ENST00000503274 C19orf71A6NCJ1 209 aa2.7□□□□□ -1.98
NIPBL-203ENST00000503274 A8MWL6 223 aa2.7□□□□□ -1.98
NIPBL-203ENST00000503274 NCR2O95944 276 aa2.7□□□□□ -1.98
NIPBL-203ENST00000503274 BCL2P10415 239 aa2.7□□□□□ -1.98
NIPBL-203ENST00000503274 SMAGPQ0VAQ4 97 aa2.7□□□□□ -1.98
NIPBL-203ENST00000503274 LYZL1Q6UWQ5 148 aa2.7□□□□□ -1.98
NIPBL-203ENST00000503274 SDIM1Q6ZPB5 146 aa2.7□□□□□ -1.98
NIPBL-203ENST00000503274 SLC51BQ86UW2 128 aa2.7□□□□□ -1.98
NIPBL-203ENST00000503274 KRTAP13-1Q8IUC0 172 aa2.7□□□□□ -1.98
NIPBL-203ENST00000503274 BORCS7Q96B45 105 aa2.7□□□□□ -1.98
NIPBL-203ENST00000503274 BTF3L4Q96K17 158 aa2.7□□□□□ -1.98
NIPBL-203ENST00000503274 IGKV2-24A0A0C4DH68 120 aa2.69□□□□□ -1.98
NIPBL-203ENST00000503274 PMCHP20382 165 aa2.69□□□□□ -1.98
NIPBL-203ENST00000503274 Q6ZRU5 148 aa2.69□□□□□ -1.98
NIPBL-203ENST00000503274 C1orf64Q8NEQ6 169 aa2.69□□□□□ -1.98
NIPBL-203ENST00000503274 CNFNQ9BYD5 112 aa2.69□□□□□ -1.98
NIPBL-203ENST00000503274 LINC00474Q9P2X8 69 aa2.69□□□□□ -1.98
NIPBL-203ENST00000503274 HMCN2Q8NDA2 5059 aa2.68□□□□□ -1.98
NIPBL-203ENST00000503274 IGKV3OR2-268A0A0C4DH90 116 aa2.68□□□□□ -1.98
NIPBL-203ENST00000503274 SDHAF1A6NFY7 115 aa2.68□□□□□ -1.98
NIPBL-203ENST00000503274 TMEM250H0YL14 139 aa2.68□□□□□ -1.98
NIPBL-203ENST00000503274 I3L3M4 83 aa2.68□□□□□ -1.98
NIPBL-203ENST00000503274 GATCO43716 136 aaKnown RBP2.68□□□□□ -1.98
NIPBL-203ENST00000503274 NDUFS6O75380 124 aaKnown RBP2.68□□□□□ -1.98
NIPBL-203ENST00000503274 PPP1R17O96001 155 aa2.68□□□□□ -1.98
NIPBL-203ENST00000503274 ZNF25P17030 456 aaPredicted RBP2.68□□□□□ -1.98
NIPBL-203ENST00000503274 CIRBPQ14011 172 aaKnown RBP2.68□□□□□ -1.98
NIPBL-203ENST00000503274 KRTAP26-1Q6PEX3 210 aa2.68□□□□□ -1.98
NIPBL-203ENST00000503274 TCTE3Q8IZS6 198 aa2.68□□□□□ -1.98
NIPBL-203ENST00000503274 GATD1Q8NB37 220 aa2.68□□□□□ -1.98
NIPBL-203ENST00000503274 OR5A1Q8NGJ0 315 aa2.68□□□□□ -1.98
NIPBL-203ENST00000503274 MRAP2Q96G30 205 aa2.68□□□□□ -1.98
NIPBL-203ENST00000503274 RNASE7Q9H1E1 156 aaKnown RBP2.68□□□□□ -1.98
NIPBL-203ENST00000503274 ST20Q9HBF5 79 aa2.68□□□□□ -1.98
NIPBL-203ENST00000503274 UBR4Q5T4S7 5183 aa2.68□□□□□ -1.98
NIPBL-203ENST00000503274 TRBV20OR9-2A0A075B6H5 130 aa2.67□□□□□ -1.98
NIPBL-203ENST00000503274 A0A1B0GUT8 65 aa2.67□□□□□ -1.98
NIPBL-203ENST00000503274 CCL25O15444 150 aa2.67□□□□□ -1.98
NIPBL-203ENST00000503274 FGF6P10767 208 aa2.67□□□□□ -1.98
NIPBL-203ENST00000503274 RAB4AP20338 218 aa2.67□□□□□ -1.98
NIPBL-203ENST00000503274 CEBPGP53567 150 aa2.67□□□□□ -1.98
NIPBL-203ENST00000503274 KRTAP10-4P60372 401 aaPredicted RBP2.67□□□□□ -1.98
NIPBL-203ENST00000503274 COX6A2Q02221 97 aa2.67□□□□□ -1.98
NIPBL-203ENST00000503274 SS18Q15532 418 aa2.67□□□□□ -1.98
NIPBL-203ENST00000503274 FAM231DQ6ZW35 169 aa2.67□□□□□ -1.98
NIPBL-203ENST00000503274 SPACA4Q8TDM5 124 aa2.67□□□□□ -1.98
NIPBL-203ENST00000503274 ISOC2Q96AB3 205 aa2.67□□□□□ -1.98
NIPBL-203ENST00000503274 EIF5A2Q9GZV4 153 aaKnown RBP2.67□□□□□ -1.98
NIPBL-203ENST00000503274 PLAC8Q9NZF1 115 aa2.67□□□□□ -1.98
NIPBL-203ENST00000503274 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.66□□□□□ -1.98
NIPBL-203ENST00000503274 GVQW2A0A096LPI5 108 aaPredicted RBP2.66□□□□□ -1.98
NIPBL-203ENST00000503274 TRAV26-2A0A0B4J265 109 aa2.66□□□□□ -1.98
NIPBL-203ENST00000503274 IGHV1-58A0A0C4DH39 117 aa2.66□□□□□ -1.98
NIPBL-203ENST00000503274 TRBV6-5A0A0K0K1A5 114 aa2.66□□□□□ -1.98
NIPBL-203ENST00000503274 IGKV2-29A2NJV5 120 aaPredicted RBP2.66□□□□□ -1.98
NIPBL-203ENST00000503274 C1orf196B1AJZ1 125 aa2.66□□□□□ -1.98
NIPBL-203ENST00000503274 K7EN84 100 aa2.66□□□□□ -1.98
NIPBL-203ENST00000503274 TCAPO15273 167 aa2.66□□□□□ -1.98
NIPBL-203ENST00000503274 FCER1GP30273 86 aa2.66□□□□□ -1.98
NIPBL-203ENST00000503274 PFN2P35080 140 aa2.66□□□□□ -1.98
NIPBL-203ENST00000503274 XCL1P47992 114 aa2.66□□□□□ -1.98
NIPBL-203ENST00000503274 FOXA3P55318 350 aaPredicted RBP2.66□□□□□ -1.98
NIPBL-203ENST00000503274 AKAP14Q86UN6 197 aa2.66□□□□□ -1.98
NIPBL-203ENST00000503274 TSKUQ8WUA8 353 aa2.66□□□□□ -1.98
NIPBL-203ENST00000503274 RPL39LQ96EH5 51 aaKnown RBP2.66□□□□□ -1.98
NIPBL-203ENST00000503274 SMIM7Q9BQ49 75 aa2.66□□□□□ -1.98
NIPBL-203ENST00000503274 TMEM191AQ9H0A3 160 aa2.66□□□□□ -1.98
NIPBL-203ENST00000503274 TRBV27A0A0K0K1C4 114 aa2.65□□□□□ -1.99
NIPBL-203ENST00000503274 LINC00959A0A1B0GUT2 108 aa2.65□□□□□ -1.99
NIPBL-203ENST00000503274 A0A1B0GW15 77 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms