RNA–Protein interactions for RNA: ENST00000498219.5

HPS1-214, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-214ENST00000498219 C2orf48Q96LS8 159 aa9.37□□□□□ -0.91
HPS1-214ENST00000498219 CHTOPQ9Y3Y2 248 aaKnown RBP9.37□□□□□ -0.91
HPS1-214ENST00000498219 C11orf86A6NJI1 115 aa9.36□□□□□ -0.91
HPS1-214ENST00000498219 SMIM1B2RUZ4 78 aa9.36□□□□□ -0.91
HPS1-214ENST00000498219 SPINK8P0C7L1 97 aa9.36□□□□□ -0.91
HPS1-214ENST00000498219 CIRBPQ14011 172 aaKnown RBP9.36□□□□□ -0.91
HPS1-214ENST00000498219 C2orf82Q6UX34 121 aa9.36□□□□□ -0.91
HPS1-214ENST00000498219 SPACA4Q8TDM5 124 aa9.36□□□□□ -0.91
HPS1-214ENST00000498219 PACRGQ96M98 296 aaPredicted RBP9.36□□□□□ -0.91
HPS1-214ENST00000498219 A0A096LNI7 61 aa9.35□□□□□ -0.91
HPS1-214ENST00000498219 PLA2G1BP04054 148 aaKnown RBP9.35□□□□□ -0.91
HPS1-214ENST00000498219 ZNF22P17026 224 aaPredicted RBP9.35□□□□□ -0.91
HPS1-214ENST00000498219 A0A087WYN8 130 aa9.34□□□□□ -0.91
HPS1-214ENST00000498219 TRAV12-1A0A0B4J245 112 aa9.34□□□□□ -0.91
HPS1-214ENST00000498219 NDUFA1O15239 70 aa9.34□□□□□ -0.91
HPS1-214ENST00000498219 PRSS2P07478 247 aa9.34□□□□□ -0.91
HPS1-214ENST00000498219 MAJINQ3KP22 176 aa9.34□□□□□ -0.91
HPS1-214ENST00000498219 MRPL35Q9NZE8 188 aaKnown RBP9.34□□□□□ -0.91
HPS1-214ENST00000498219 PKHD1L1Q86WI1 4243 aa9.34□□□□□ -0.91
HPS1-214ENST00000498219 KRTAP10-4P60372 401 aaPredicted RBP9.33□□□□□ -0.92
HPS1-214ENST00000498219 C6orf48Q9UBA6 75 aa9.33□□□□□ -0.92
HPS1-214ENST00000498219 HSPB8Q9UJY1 196 aa9.33□□□□□ -0.92
HPS1-214ENST00000498219 H3BRM9 83 aa9.32□□□□□ -0.92
HPS1-214ENST00000498219 C6orf226Q5I0X4 101 aa9.32□□□□□ -0.92
HPS1-214ENST00000498219 COA6Q5JTJ3 125 aaKnown RBP9.32□□□□□ -0.92
HPS1-214ENST00000498219 TMEM170BQ5T4T1 132 aa9.32□□□□□ -0.92
HPS1-214ENST00000498219 Q8IZM0 81 aa9.32□□□□□ -0.92
HPS1-214ENST00000498219 MYCBP2O75592 4640 aa9.31□□□□□ -0.92
HPS1-214ENST00000498219 F8VRH5 84 aa9.31□□□□□ -0.92
HPS1-214ENST00000498219 ODF1Q14990 250 aa9.31□□□□□ -0.92
HPS1-214ENST00000498219 COX7B2Q8TF08 81 aa9.31□□□□□ -0.92
HPS1-214ENST00000498219 PMCHL2Q9BQD1 86 aa9.31□□□□□ -0.92
HPS1-214ENST00000498219 LOC107984640A0A0U1RRK4 108 aa9.3□□□□□ -0.92
HPS1-214ENST00000498219 F8WDY8 70 aa9.3□□□□□ -0.92
HPS1-214ENST00000498219 CKS1BP61024 79 aa9.3□□□□□ -0.92
HPS1-214ENST00000498219 RPL37AP61513 92 aaKnown RBP9.3□□□□□ -0.92
HPS1-214ENST00000498219 GAGE2BQ13066 116 aa9.3□□□□□ -0.92
HPS1-214ENST00000498219 C9orf116Q5BN46 136 aaPredicted RBP9.3□□□□□ -0.92
HPS1-214ENST00000498219 STPG4Q8N801 248 aa9.3□□□□□ -0.92
HPS1-214ENST00000498219 PLAC8Q9NZF1 115 aa9.3□□□□□ -0.92
HPS1-214ENST00000498219 RNF151Q2KHN1 245 aa9.29□□□□□ -0.92
HPS1-214ENST00000498219 IGLV5-39A0A0G2JS06 123 aa9.28□□□□□ -0.92
HPS1-214ENST00000498219 RPL18AQ02543 176 aaKnown RBP9.28□□□□□ -0.92
HPS1-214ENST00000498219 MAP1LC3CQ9BXW4 147 aa9.28□□□□□ -0.92
HPS1-214ENST00000498219 TMEM223A0PJW6 202 aa9.27□□□□□ -0.93
HPS1-214ENST00000498219 PTTG1IPP53801 180 aa9.27□□□□□ -0.93
HPS1-214ENST00000498219 TRBV30A0A0K0K1B3 111 aa9.26□□□□□ -0.93
HPS1-214ENST00000498219 HNRNPA3P51991 378 aaKnown RBP9.26□□□□□ -0.93
HPS1-214ENST00000498219 Q6ZRP5 223 aa9.26□□□□□ -0.93
HPS1-214ENST00000498219 SYS1-DBNDD2H3BUS1 97 aa9.25□□□□□ -0.93
HPS1-214ENST00000498219 GAGE2EQ4V326 116 aa9.25□□□□□ -0.93
HPS1-214ENST00000498219 GAGE2DQ9UEU5 116 aa9.25□□□□□ -0.93
HPS1-214ENST00000498219 PKIGQ9Y2B9 76 aa9.25□□□□□ -0.93
HPS1-214ENST00000498219 FAT3Q8TDW7 4589 aa9.25□□□□□ -0.93
HPS1-214ENST00000498219 DMBT1Q9UGM3 2413 aaPredicted RBP9.24□□□□□ -0.93
HPS1-214ENST00000498219 DPM2O94777 84 aa9.24□□□□□ -0.93
HPS1-214ENST00000498219 TLX1NBP0CAT3 122 aa9.24□□□□□ -0.93
HPS1-214ENST00000498219 C3orf79P0CE67 100 aa9.24□□□□□ -0.93
HPS1-214ENST00000498219 CXCL5P42830 114 aa9.24□□□□□ -0.93
HPS1-214ENST00000498219 LRP1Q07954 4544 aaKnown RBP9.23□□□□□ -0.93
HPS1-214ENST00000498219 A0A1W2PNN7 141 aa9.23□□□□□ -0.93
HPS1-214ENST00000498219 IGKCP01834 107 aa9.23□□□□□ -0.93
HPS1-214ENST00000498219 PLNP26678 52 aa9.23□□□□□ -0.93
HPS1-214ENST00000498219 KRTDAPP60985 99 aa9.23□□□□□ -0.93
HPS1-214ENST00000498219 LINC00474Q9P2X8 69 aa9.23□□□□□ -0.93
HPS1-214ENST00000498219 NDUFC2-KCTD14E9PQ53 114 aa9.22□□□□□ -0.93
HPS1-214ENST00000498219 HIST3H2BBQ8N257 126 aa9.22□□□□□ -0.93
HPS1-214ENST00000498219 FAM168BA1KXE4 195 aa9.21□□□□□ -0.94
HPS1-214ENST00000498219 C7orf33Q8WU49 177 aa9.21□□□□□ -0.94
HPS1-214ENST00000498219 ZNF625Q96I27 306 aaPredicted RBP9.21□□□□□ -0.94
HPS1-214ENST00000498219 S100A6P06703 90 aa9.2□□□□□ -0.94
HPS1-214ENST00000498219 LINC01545Q5VT33 79 aa9.2□□□□□ -0.94
HPS1-214ENST00000498219 PET117Q6UWS5 81 aa9.2□□□□□ -0.94
HPS1-214ENST00000498219 TSPEAR-AS2P59090 65 aa9.19□□□□□ -0.94
HPS1-214ENST00000498219 SNRPEP62304 92 aaKnown RBP9.19□□□□□ -0.94
HPS1-214ENST00000498219 C9orf129Q5T035 196 aaKnown RBP9.19□□□□□ -0.94
HPS1-214ENST00000498219 XAGE1AQ9HD64 81 aa9.19□□□□□ -0.94
HPS1-214ENST00000498219 PFN2P35080 140 aa9.18□□□□□ -0.94
HPS1-214ENST00000498219 HIST1H2BLQ99880 126 aa9.18□□□□□ -0.94
HPS1-214ENST00000498219 HERC1Q15751 4861 aa9.18□□□□□ -0.94
HPS1-214ENST00000498219 LEPROTO15243 131 aa9.17□□□□□ -0.94
HPS1-214ENST00000498219 S100A2P29034 98 aa9.17□□□□□ -0.94
HPS1-214ENST00000498219 PHF5AQ7RTV0 110 aaKnown RBP9.17□□□□□ -0.94
HPS1-214ENST00000498219 FAM19A5Q7Z5A7 132 aaPredicted RBP9.17□□□□□ -0.94
HPS1-214ENST00000498219 KRTAP7-1Q8IUC3 87 aa9.17□□□□□ -0.94
HPS1-214ENST00000498219 J3QL48 77 aa9.16□□□□□ -0.94
HPS1-214ENST00000498219 PRR3P79522 188 aaKnown RBP9.16□□□□□ -0.94
HPS1-214ENST00000498219 ERG28Q9UKR5 140 aa9.16□□□□□ -0.94
HPS1-214ENST00000498219 HERVK_113P61574 105 aa9.15□□□□□ -0.94
HPS1-214ENST00000498219 A0A0U1RRA0 63 aa9.14□□□□□ -0.95
HPS1-214ENST00000498219 KRTAP29-1A8MX34 341 aaPredicted RBP9.14□□□□□ -0.95
HPS1-214ENST00000498219 J3QQQ9 107 aa9.14□□□□□ -0.95
HPS1-214ENST00000498219 ATOH7Q8N100 152 aa9.14□□□□□ -0.95
HPS1-214ENST00000498219 PLEKHB2Q96CS7 222 aa9.14□□□□□ -0.95
HPS1-214ENST00000498219 NDUFA12Q9UI09 145 aa9.14□□□□□ -0.95
HPS1-214ENST00000498219 C5orf52A6NGY3 159 aa9.13□□□□□ -0.95
HPS1-214ENST00000498219 SERTAD4-AS1Q5TG53 156 aa9.13□□□□□ -0.95
HPS1-214ENST00000498219 C20orf202A1L168 122 aa9.12□□□□□ -0.95
HPS1-214ENST00000498219 LGALS3P17931 250 aaKnown RBP9.12□□□□□ -0.95
HPS1-214ENST00000498219 SFTA2Q6UW10 78 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms