RNA–Protein interactions for RNA: ENST00000498038.1

HLA-DPB1-217, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

Gene HLA-DPB1, Length 775 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-217ENST00000498038 DYNC1H1Q14204 4646 aaKnown RBP12.62□□□□□ -0.39
HLA-DPB1-217ENST00000498038 PET117Q6UWS5 81 aa12.62□□□□□ -0.39
HLA-DPB1-217ENST00000498038 IGLV5-39A0A0G2JS06 123 aa12.61□□□□□ -0.39
HLA-DPB1-217ENST00000498038 TMEM223A0PJW6 202 aa12.61□□□□□ -0.39
HLA-DPB1-217ENST00000498038 IGKCP01834 107 aa12.61□□□□□ -0.39
HLA-DPB1-217ENST00000498038 RNF151Q2KHN1 245 aa12.61□□□□□ -0.39
HLA-DPB1-217ENST00000498038 C6orf48Q9UBA6 75 aa12.6□□□□□ -0.39
HLA-DPB1-217ENST00000498038 LOC107984640A0A0U1RRK4 108 aa12.59□□□□□ -0.39
HLA-DPB1-217ENST00000498038 CDK2AP2O75956 126 aa12.59□□□□□ -0.39
HLA-DPB1-217ENST00000498038 CXCL5P42830 114 aa12.59□□□□□ -0.39
HLA-DPB1-217ENST00000498038 HIST1H2BLQ99880 126 aa12.59□□□□□ -0.39
HLA-DPB1-217ENST00000498038 PKIGQ9Y2B9 76 aa12.59□□□□□ -0.39
HLA-DPB1-217ENST00000498038 TRBV30A0A0K0K1B3 111 aa12.58□□□□□ -0.4
HLA-DPB1-217ENST00000498038 LINC01545Q5VT33 79 aa12.58□□□□□ -0.4
HLA-DPB1-217ENST00000498038 Q6ZSA8 131 aa12.58□□□□□ -0.4
HLA-DPB1-217ENST00000498038 DPH3Q96FX2 82 aa12.58□□□□□ -0.4
HLA-DPB1-217ENST00000498038 C5orf52A6NGY3 159 aa12.57□□□□□ -0.4
HLA-DPB1-217ENST00000498038 HAMPP81172 84 aa12.57□□□□□ -0.4
HLA-DPB1-217ENST00000498038 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.57□□□□□ -0.4
HLA-DPB1-217ENST00000498038 LRP1BQ9NZR2 4599 aa12.56□□□□□ -0.4
HLA-DPB1-217ENST00000498038 IGKV2-24A0A0C4DH68 120 aa12.56□□□□□ -0.4
HLA-DPB1-217ENST00000498038 CHTF8P0CG12 524 aa12.56□□□□□ -0.4
HLA-DPB1-217ENST00000498038 XGP55808 180 aa12.56□□□□□ -0.4
HLA-DPB1-217ENST00000498038 GAGE2BQ13066 116 aa12.56□□□□□ -0.4
HLA-DPB1-217ENST00000498038 C9orf116Q5BN46 136 aaPredicted RBP12.56□□□□□ -0.4
HLA-DPB1-217ENST00000498038 A0A096LNI7 61 aa12.55□□□□□ -0.4
HLA-DPB1-217ENST00000498038 PANO1I0J062 215 aa12.55□□□□□ -0.4
HLA-DPB1-217ENST00000498038 RPL18AQ02543 176 aaKnown RBP12.55□□□□□ -0.4
HLA-DPB1-217ENST00000498038 C20orf202A1L168 122 aa12.54□□□□□ -0.4
HLA-DPB1-217ENST00000498038 HERVK_113P61574 105 aa12.53□□□□□ -0.4
HLA-DPB1-217ENST00000498038 MAJINQ3KP22 176 aa12.53□□□□□ -0.4
HLA-DPB1-217ENST00000498038 KRTAP17-1Q9BYP8 105 aa12.53□□□□□ -0.4
HLA-DPB1-217ENST00000498038 PTTG1IPP53801 180 aa12.52□□□□□ -0.41
HLA-DPB1-217ENST00000498038 SCXQ7RTU7 201 aa12.52□□□□□ -0.41
HLA-DPB1-217ENST00000498038 TLX1NBP0CAT3 122 aa12.51□□□□□ -0.41
HLA-DPB1-217ENST00000498038 CIRBPQ14011 172 aaKnown RBP12.51□□□□□ -0.41
HLA-DPB1-217ENST00000498038 CIRBP-AS1Q8TBR5 109 aa12.51□□□□□ -0.41
HLA-DPB1-217ENST00000498038 SPACA4Q8TDM5 124 aa12.51□□□□□ -0.41
HLA-DPB1-217ENST00000498038 LINC00474Q9P2X8 69 aa12.51□□□□□ -0.41
HLA-DPB1-217ENST00000498038 TMA7Q9Y2S6 64 aaKnown RBP12.51□□□□□ -0.41
HLA-DPB1-217ENST00000498038 NDUFC2-KCTD14E9PQ53 114 aa12.5□□□□□ -0.41
HLA-DPB1-217ENST00000498038 LEPROTO15243 131 aa12.5□□□□□ -0.41
HLA-DPB1-217ENST00000498038 GAGE2EQ4V326 116 aa12.5□□□□□ -0.41
HLA-DPB1-217ENST00000498038 Q6ZRP5 223 aa12.5□□□□□ -0.41
HLA-DPB1-217ENST00000498038 GAGE2DQ9UEU5 116 aa12.5□□□□□ -0.41
HLA-DPB1-217ENST00000498038 PLEKHB2Q96CS7 222 aa12.49□□□□□ -0.41
HLA-DPB1-217ENST00000498038 ZNF625Q96I27 306 aaPredicted RBP12.49□□□□□ -0.41
HLA-DPB1-217ENST00000498038 SFTA2Q6UW10 78 aa12.48□□□□□ -0.41
HLA-DPB1-217ENST00000498038 STPG4Q8N801 248 aa12.48□□□□□ -0.41
HLA-DPB1-217ENST00000498038 A0A087WYN8 130 aa12.47□□□□□ -0.41
HLA-DPB1-217ENST00000498038 DNAH8Q96JB1 4490 aa12.47□□□□□ -0.41
HLA-DPB1-217ENST00000498038 J3QQQ9 107 aa12.46□□□□□ -0.41
HLA-DPB1-217ENST00000498038 SMR3BP02814 79 aaPredicted RBP12.46□□□□□ -0.41
HLA-DPB1-217ENST00000498038 AKR1D1P51857 326 aa12.46□□□□□ -0.41
HLA-DPB1-217ENST00000498038 TSPEAR-AS2P59090 65 aa12.46□□□□□ -0.41
HLA-DPB1-217ENST00000498038 ATOH7Q8N100 152 aa12.46□□□□□ -0.41
HLA-DPB1-217ENST00000498038 E9PLD3 99 aa12.45□□□□□ -0.42
HLA-DPB1-217ENST00000498038 PFN2P35080 140 aa12.45□□□□□ -0.42
HLA-DPB1-217ENST00000498038 NDUFA12Q9UI09 145 aa12.45□□□□□ -0.42
HLA-DPB1-217ENST00000498038 MYMXA0A1B0GTQ4 84 aa12.44□□□□□ -0.42
HLA-DPB1-217ENST00000498038 LGALS3P17931 250 aaKnown RBP12.44□□□□□ -0.42
HLA-DPB1-217ENST00000498038 ERG28Q9UKR5 140 aa12.44□□□□□ -0.42
HLA-DPB1-217ENST00000498038 APOBP04114 4563 aaKnown RBP12.43□□□□□ -0.42
HLA-DPB1-217ENST00000498038 PLAC8Q9NZF1 115 aa12.43□□□□□ -0.42
HLA-DPB1-217ENST00000498038 HERV-K104P63124 156 aa12.42□□□□□ -0.42
HLA-DPB1-217ENST00000498038 A0A1W2PNN7 141 aa12.41□□□□□ -0.42
HLA-DPB1-217ENST00000498038 SCGB1D1O95968 90 aa12.41□□□□□ -0.42
HLA-DPB1-217ENST00000498038 COX17Q14061 63 aa12.41□□□□□ -0.42
HLA-DPB1-217ENST00000498038 XAGE1AQ9HD64 81 aa12.41□□□□□ -0.42
HLA-DPB1-217ENST00000498038 KIAA1109Q2LD37 5005 aa12.4□□□□□ -0.42
HLA-DPB1-217ENST00000498038 NMUP48645 174 aa12.4□□□□□ -0.42
HLA-DPB1-217ENST00000498038 LINC00158P58513 81 aa12.4□□□□□ -0.42
HLA-DPB1-217ENST00000498038 MEIG1Q5JSS6 88 aa12.4□□□□□ -0.42
HLA-DPB1-217ENST00000498038 C9orf129Q5T035 196 aaKnown RBP12.4□□□□□ -0.42
HLA-DPB1-217ENST00000498038 A0A0U1RRA0 63 aa12.39□□□□□ -0.43
HLA-DPB1-217ENST00000498038 FAM168BA1KXE4 195 aa12.39□□□□□ -0.43
HLA-DPB1-217ENST00000498038 IGKV2D-26A0A0A0MRZ7 120 aa12.38□□□□□ -0.43
HLA-DPB1-217ENST00000498038 RYR1P21817 5038 aa12.37□□□□□ -0.43
HLA-DPB1-217ENST00000498038 SMIM13P0DJ93 91 aa12.37□□□□□ -0.43
HLA-DPB1-217ENST00000498038 ANKRD39Q53RE8 183 aa12.37□□□□□ -0.43
HLA-DPB1-217ENST00000498038 FAM19A5Q7Z5A7 132 aaPredicted RBP12.37□□□□□ -0.43
HLA-DPB1-217ENST00000498038 LINC00528Q8N1L1 170 aa12.37□□□□□ -0.43
HLA-DPB1-217ENST00000498038 Q8N1X5 172 aa12.37□□□□□ -0.43
HLA-DPB1-217ENST00000498038 LINC00587B1AMM8 73 aa12.36□□□□□ -0.43
HLA-DPB1-217ENST00000498038 FAM229AH3BQW9 127 aa12.35□□□□□ -0.43
HLA-DPB1-217ENST00000498038 HERC2O95714 4834 aa12.35□□□□□ -0.43
HLA-DPB1-217ENST00000498038 HSPG2P98160 4391 aa12.34□□□□□ -0.43
HLA-DPB1-217ENST00000498038 EPM2AB3EWF7 344 aa12.34□□□□□ -0.43
HLA-DPB1-217ENST00000498038 HSBP1L1C9JCN9 74 aa12.34□□□□□ -0.43
HLA-DPB1-217ENST00000498038 SND1-IT1Q9HBX3 110 aa12.34□□□□□ -0.43
HLA-DPB1-217ENST00000498038 TTTY13Q9BZ97 58 aa12.33□□□□□ -0.44
HLA-DPB1-217ENST00000498038 A0A0J9YXY3 114 aa12.32□□□□□ -0.44
HLA-DPB1-217ENST00000498038 ZNF815PA8K554 130 aa12.32□□□□□ -0.44
HLA-DPB1-217ENST00000498038 KRTAP7-1Q8IUC3 87 aa12.32□□□□□ -0.44
HLA-DPB1-217ENST00000498038 C7orf33Q8WU49 177 aa12.32□□□□□ -0.44
HLA-DPB1-217ENST00000498038 PCLOQ9Y6V0 5065 aa12.31□□□□□ -0.44
HLA-DPB1-217ENST00000498038 SERTAD4-AS1Q5TG53 156 aa12.31□□□□□ -0.44
HLA-DPB1-217ENST00000498038 Q5VSD8 79 aa12.31□□□□□ -0.44
HLA-DPB1-217ENST00000498038 PHF5AQ7RTV0 110 aaKnown RBP12.31□□□□□ -0.44
HLA-DPB1-217ENST00000498038 MIR7-3HGQ8N6C7 128 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms