RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 INSL4Q14641 139 aa0.98□□□□□ -2.25
UBR4-217ENST00000497018 PRR9Q5T870 116 aa0.98□□□□□ -2.25
UBR4-217ENST00000497018 SBSPONQ8IVN8 264 aa0.98□□□□□ -2.25
UBR4-217ENST00000497018 CLECL1Q8IZS7 167 aa0.98□□□□□ -2.25
UBR4-217ENST00000497018 SVBPQ8N300 66 aa0.98□□□□□ -2.25
UBR4-217ENST00000497018 DYNLRB2Q8TF09 96 aa0.98□□□□□ -2.25
UBR4-217ENST00000497018 AQP10Q96PS8 301 aa0.98□□□□□ -2.25
UBR4-217ENST00000497018 SMIM7Q9BQ49 75 aa0.98□□□□□ -2.25
UBR4-217ENST00000497018 TMEM242Q9NWH2 141 aa0.98□□□□□ -2.25
UBR4-217ENST00000497018 NDUFA12Q9UI09 145 aa0.98□□□□□ -2.25
UBR4-217ENST00000497018 PKHD1P08F94 4074 aa0.98□□□□□ -2.25
UBR4-217ENST00000497018 KIAA1549Q9HCM3 1950 aa0.97□□□□□ -2.25
UBR4-217ENST00000497018 IGKV1D-17A0A075B6S4 117 aa0.97□□□□□ -2.25
UBR4-217ENST00000497018 IGKV2-24A0A0C4DH68 120 aa0.97□□□□□ -2.25
UBR4-217ENST00000497018 SPRR5A0A1B0GTR4 108 aa0.97□□□□□ -2.25
UBR4-217ENST00000497018 RBAKDNA6NC62 111 aa0.97□□□□□ -2.25
UBR4-217ENST00000497018 NUPR2A6NF83 97 aa0.97□□□□□ -2.25
UBR4-217ENST00000497018 IL5P05113 134 aa0.97□□□□□ -2.25
UBR4-217ENST00000497018 IGLC1P0CG04 106 aa0.97□□□□□ -2.25
UBR4-217ENST00000497018 SLC25A6P12236 298 aa0.97□□□□□ -2.25
UBR4-217ENST00000497018 RPL26P61254 145 aaKnown RBP0.97□□□□□ -2.25
UBR4-217ENST00000497018 SPRNQ5BIV9 151 aa0.97□□□□□ -2.25
UBR4-217ENST00000497018 PYY3Q5JQD4 70 aa0.97□□□□□ -2.25
UBR4-217ENST00000497018 IGFL1Q6UW32 110 aa0.97□□□□□ -2.25
UBR4-217ENST00000497018 CASC2Q6XLA1 102 aa0.97□□□□□ -2.25
UBR4-217ENST00000497018 C5orf38Q86SI9 138 aa0.97□□□□□ -2.25
UBR4-217ENST00000497018 SPTSSAQ969W0 71 aa0.97□□□□□ -2.25
UBR4-217ENST00000497018 TMEM141Q96I45 108 aa0.97□□□□□ -2.25
UBR4-217ENST00000497018 DPY30Q9C005 99 aa0.97□□□□□ -2.25
UBR4-217ENST00000497018 PRO0461Q9UI25 63 aa0.97□□□□□ -2.25
UBR4-217ENST00000497018 SCP2D1Q9UJQ7 156 aa0.97□□□□□ -2.25
UBR4-217ENST00000497018 V9GYS6 101 aa0.97□□□□□ -2.25
UBR4-217ENST00000497018 DNAH7Q8WXX0 4024 aa0.97□□□□□ -2.25
UBR4-217ENST00000497018 SPTBP11277 2137 aa0.97□□□□□ -2.25
UBR4-217ENST00000497018 ARHGAP32A7KAX9 2087 aa0.96□□□□□ -2.25
UBR4-217ENST00000497018 ARFGEF3Q5TH69 2177 aa0.96□□□□□ -2.26
UBR4-217ENST00000497018 UQCRHLA0A096LP55 91 aa0.96□□□□□ -2.26
UBR4-217ENST00000497018 SDHAF1A6NFY7 115 aa0.96□□□□□ -2.26
UBR4-217ENST00000497018 H3BQ15 152 aa0.96□□□□□ -2.26
UBR4-217ENST00000497018 IGLV6-57P01721 117 aa0.96□□□□□ -2.26
UBR4-217ENST00000497018 RNASE3P12724 160 aaKnown RBP0.96□□□□□ -2.26
UBR4-217ENST00000497018 COX7CP15954 63 aa0.96□□□□□ -2.26
UBR4-217ENST00000497018 EFNA4P52798 201 aa0.96□□□□□ -2.26
UBR4-217ENST00000497018 NPC2P61916 151 aa0.96□□□□□ -2.26
UBR4-217ENST00000497018 UBE2G1P62253 170 aa0.96□□□□□ -2.26
UBR4-217ENST00000497018 DCDP81605 110 aaKnown RBP0.96□□□□□ -2.26
UBR4-217ENST00000497018 Q0VG73 95 aa0.96□□□□□ -2.26
UBR4-217ENST00000497018 RHOHQ15669 191 aa0.96□□□□□ -2.26
UBR4-217ENST00000497018 C9orf116Q5BN46 136 aaPredicted RBP0.96□□□□□ -2.26
UBR4-217ENST00000497018 SPANXN1Q5VSR9 72 aa0.96□□□□□ -2.26
UBR4-217ENST00000497018 C12orf73Q69YU5 71 aa0.96□□□□□ -2.26
UBR4-217ENST00000497018 CSAG1Q6PB30 78 aa0.96□□□□□ -2.26
UBR4-217ENST00000497018 C2orf82Q6UX34 121 aa0.96□□□□□ -2.26
UBR4-217ENST00000497018 LYPD1Q8N2G4 141 aa0.96□□□□□ -2.26
UBR4-217ENST00000497018 OR10AG1Q8NH19 301 aa0.96□□□□□ -2.26
UBR4-217ENST00000497018 TSKUQ8WUA8 353 aa0.96□□□□□ -2.26
UBR4-217ENST00000497018 LINC00052Q96N35 136 aa0.96□□□□□ -2.26
UBR4-217ENST00000497018 BPESC1Q9GZL8 116 aa0.96□□□□□ -2.26
UBR4-217ENST00000497018 LINC00474Q9P2X8 69 aa0.96□□□□□ -2.26
UBR4-217ENST00000497018 NINQ8N4C6 2090 aa0.96□□□□□ -2.26
UBR4-217ENST00000497018 A0A0J9YY99 117 aa0.95□□□□□ -2.26
UBR4-217ENST00000497018 FAM24AA6NFZ4 105 aa0.95□□□□□ -2.26
UBR4-217ENST00000497018 SNCGO76070 127 aa0.95□□□□□ -2.26
UBR4-217ENST00000497018 CCKP06307 115 aa0.95□□□□□ -2.26
UBR4-217ENST00000497018 PIPP12273 146 aaPredicted RBP0.95□□□□□ -2.26
UBR4-217ENST00000497018 CBLN1P23435 193 aa0.95□□□□□ -2.26
UBR4-217ENST00000497018 ELOBQ15370 118 aa0.95□□□□□ -2.26
UBR4-217ENST00000497018 IQCJQ1A5X6 159 aa0.95□□□□□ -2.26
UBR4-217ENST00000497018 ZNF431Q8TF32 576 aaPredicted RBP0.95□□□□□ -2.26
UBR4-217ENST00000497018 TVP23CQ96ET8 276 aa0.95□□□□□ -2.26
UBR4-217ENST00000497018 PRO1933Q9H354 126 aa0.95□□□□□ -2.26
UBR4-217ENST00000497018 C22orf24Q9Y442 160 aa0.95□□□□□ -2.26
UBR4-217ENST00000497018 HMCN2Q8NDA2 5059 aa0.95□□□□□ -2.26
UBR4-217ENST00000497018 STARD9Q9P2P6 4700 aa0.95□□□□□ -2.26
UBR4-217ENST00000497018 HSPG2P98160 4391 aa0.94□□□□□ -2.26
UBR4-217ENST00000497018 IGKV3-7A0A075B6H7 116 aa0.94□□□□□ -2.26
UBR4-217ENST00000497018 H3BRN7 92 aa0.94□□□□□ -2.26
UBR4-217ENST00000497018 SSSCA1O60232 199 aa0.94□□□□□ -2.26
UBR4-217ENST00000497018 IGKV1-17P01599 117 aa0.94□□□□□ -2.26
UBR4-217ENST00000497018 IGKCP01834 107 aa0.94□□□□□ -2.26
UBR4-217ENST00000497018 TFF1P04155 84 aa0.94□□□□□ -2.26
UBR4-217ENST00000497018 RNASE2P10153 161 aaKnown RBP0.94□□□□□ -2.26
UBR4-217ENST00000497018 RBM3P98179 157 aaKnown RBP0.94□□□□□ -2.26
UBR4-217ENST00000497018 HCP5Q6MZN7 132 aa0.94□□□□□ -2.26
UBR4-217ENST00000497018 SLC48A1Q6P1K1 146 aa0.94□□□□□ -2.26
UBR4-217ENST00000497018 LYPD5Q6UWN5 251 aa0.94□□□□□ -2.26
UBR4-217ENST00000497018 Q6ZRN7 208 aaPredicted RBP0.94□□□□□ -2.26
UBR4-217ENST00000497018 COMMD6Q7Z4G1 85 aa0.94□□□□□ -2.26
UBR4-217ENST00000497018 LINC00304Q8N9R0 145 aa0.94□□□□□ -2.26
UBR4-217ENST00000497018 DEFB104AQ8WTQ1 72 aa0.94□□□□□ -2.26
UBR4-217ENST00000497018 PPDPFLQ8WWR9 84 aa0.94□□□□□ -2.26
UBR4-217ENST00000497018 ODF3Q96PU9 254 aa0.94□□□□□ -2.26
UBR4-217ENST00000497018 TTTY12Q9BZ98 90 aa0.94□□□□□ -2.26
UBR4-217ENST00000497018 Q9H521 79 aa0.94□□□□□ -2.26
UBR4-217ENST00000497018 NPVFQ9HCQ7 196 aa0.94□□□□□ -2.26
UBR4-217ENST00000497018 TMEM106BQ9NUM4 274 aa0.94□□□□□ -2.26
UBR4-217ENST00000497018 SSPOA2VEC9 5147 aa0.93□□□□□ -2.26
UBR4-217ENST00000497018 SRRM2Q9UQ35 2752 aaKnown RBP0.93□□□□□ -2.26
UBR4-217ENST00000497018 TRBV6-8A0A0A6YYG3 113 aa0.93□□□□□ -2.26
UBR4-217ENST00000497018 UBE2L5PA0A1B0GUS4 154 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms