RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2□□□□□ -2.09
SNRNP48-202ENST00000496946 Q8N9W7 124 aa2□□□□□ -2.09
SNRNP48-202ENST00000496946 WFDC10AQ9H1F0 79 aa2□□□□□ -2.09
SNRNP48-202ENST00000496946 KLK9Q9UKQ9 250 aa2□□□□□ -2.09
SNRNP48-202ENST00000496946 IGLV10-54A0A075B6I4 117 aa1.99□□□□□ -2.09
SNRNP48-202ENST00000496946 LOC110117498A0A087WWA1 95 aa1.99□□□□□ -2.09
SNRNP48-202ENST00000496946 IGKV1-17P01599 117 aa1.99□□□□□ -2.09
SNRNP48-202ENST00000496946 SPINK7P58062 85 aa1.99□□□□□ -2.09
SNRNP48-202ENST00000496946 LINC00483Q53H64 154 aa1.99□□□□□ -2.09
SNRNP48-202ENST00000496946 LINC00167Q96N53 147 aa1.99□□□□□ -2.09
SNRNP48-202ENST00000496946 CACNA1CQ13936 2221 aa1.99□□□□□ -2.09
SNRNP48-202ENST00000496946 TNRC6BQ9UPQ9 1833 aaKnown RBP1.99□□□□□ -2.09
SNRNP48-202ENST00000496946 IGKV3D-11A0A0A0MRZ8 115 aa1.99□□□□□ -2.09
SNRNP48-202ENST00000496946 A0A1B0GVX0 72 aa1.99□□□□□ -2.09
SNRNP48-202ENST00000496946 TLX1NBP0CAT3 122 aa1.99□□□□□ -2.09
SNRNP48-202ENST00000496946 SPINK9Q5DT21 86 aa1.99□□□□□ -2.09
SNRNP48-202ENST00000496946 IGLV11-55A0A075B6I3 123 aa1.98□□□□□ -2.09
SNRNP48-202ENST00000496946 H0Y9P7 68 aa1.98□□□□□ -2.09
SNRNP48-202ENST00000496946 NDUFA4O00483 81 aa1.98□□□□□ -2.09
SNRNP48-202ENST00000496946 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
SNRNP48-202ENST00000496946 IGLV3-1P01715 115 aa1.98□□□□□ -2.09
SNRNP48-202ENST00000496946 PIGYQ3MUY2 71 aa1.98□□□□□ -2.09
SNRNP48-202ENST00000496946 GAFA1Q96PS6 74 aa1.98□□□□□ -2.09
SNRNP48-202ENST00000496946 TNCP24821 2201 aa1.98□□□□□ -2.09
SNRNP48-202ENST00000496946 H3BPC8 53 aa1.98□□□□□ -2.09
SNRNP48-202ENST00000496946 CRIP1P50238 77 aa1.98□□□□□ -2.09
SNRNP48-202ENST00000496946 DEFB114Q30KQ6 69 aa1.98□□□□□ -2.09
SNRNP48-202ENST00000496946 LINC00308Q8TCZ7 52 aa1.98□□□□□ -2.09
SNRNP48-202ENST00000496946 ZFHX3Q15911 3703 aa1.98□□□□□ -2.09
SNRNP48-202ENST00000496946 ZFHX2Q9C0A1 2572 aaPredicted RBP1.97□□□□□ -2.09
SNRNP48-202ENST00000496946 IGLV7-46A0A075B6I9 117 aa1.97□□□□□ -2.09
SNRNP48-202ENST00000496946 IGKV1D-37A0A075B6S9 117 aa1.97□□□□□ -2.09
SNRNP48-202ENST00000496946 IGHV1-18A0A0C4DH31 117 aa1.97□□□□□ -2.09
SNRNP48-202ENST00000496946 IGKV2-29A2NJV5 120 aaPredicted RBP1.97□□□□□ -2.09
SNRNP48-202ENST00000496946 IGHV3-53P01767 116 aa1.97□□□□□ -2.09
SNRNP48-202ENST00000496946 KRTAP25-1Q3LHN0 102 aa1.97□□□□□ -2.09
SNRNP48-202ENST00000496946 SPAG17Q6Q759 2223 aa1.97□□□□□ -2.09
SNRNP48-202ENST00000496946 IGKV1OR2-108A0A075B7D4 117 aa1.97□□□□□ -2.09
SNRNP48-202ENST00000496946 NDUFAF8A1L188 74 aa1.97□□□□□ -2.09
SNRNP48-202ENST00000496946 H3BQ85 93 aa1.97□□□□□ -2.09
SNRNP48-202ENST00000496946 ERHP84090 104 aaKnown RBP1.97□□□□□ -2.09
SNRNP48-202ENST00000496946 MRGPRG-AS1Q2M3A8 158 aa1.97□□□□□ -2.09
SNRNP48-202ENST00000496946 C1orf137Q5JT78 98 aa1.97□□□□□ -2.09
SNRNP48-202ENST00000496946 CR1P17927 2039 aa1.97□□□□□ -2.09
SNRNP48-202ENST00000496946 ALPK2Q86TB3 2170 aa1.96□□□□□ -2.09
SNRNP48-202ENST00000496946 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.96□□□□□ -2.1
SNRNP48-202ENST00000496946 A8MUU9 505 aa1.96□□□□□ -2.1
SNRNP48-202ENST00000496946 DMAC1Q96GE9 116 aa1.96□□□□□ -2.1
SNRNP48-202ENST00000496946 PRR34Q9NV39 138 aa1.96□□□□□ -2.1
SNRNP48-202ENST00000496946 IGHV3-64DA0A0J9YX35 117 aa1.96□□□□□ -2.1
SNRNP48-202ENST00000496946 ETDCA0A1B0GVM5 59 aa1.96□□□□□ -2.1
SNRNP48-202ENST00000496946 ODF3BA8MYP8 253 aa1.96□□□□□ -2.1
SNRNP48-202ENST00000496946 NDUFA1O15239 70 aa1.96□□□□□ -2.1
SNRNP48-202ENST00000496946 IGKV3-15P01624 115 aa1.96□□□□□ -2.1
SNRNP48-202ENST00000496946 IGKV4-1P06312 121 aa1.96□□□□□ -2.1
SNRNP48-202ENST00000496946 DEFB112Q30KQ8 113 aa1.96□□□□□ -2.1
SNRNP48-202ENST00000496946 KRTAP5-2Q701N4 177 aa1.96□□□□□ -2.1
SNRNP48-202ENST00000496946 MGPP08493 103 aa1.95□□□□□ -2.1
SNRNP48-202ENST00000496946 LCE3CQ5T5A8 94 aa1.95□□□□□ -2.1
SNRNP48-202ENST00000496946 NTM-AS1Q6ZSK4 140 aa1.95□□□□□ -2.1
SNRNP48-202ENST00000496946 Q6ZTI0 123 aa1.95□□□□□ -2.1
SNRNP48-202ENST00000496946 DEFB126Q9BYW3 111 aa1.95□□□□□ -2.1
SNRNP48-202ENST00000496946 SDK1Q7Z5N4 2213 aa1.95□□□□□ -2.1
SNRNP48-202ENST00000496946 RP1P56715 2156 aa1.95□□□□□ -2.1
SNRNP48-202ENST00000496946 MALRD1Q5VYJ5 2156 aa1.95□□□□□ -2.1
SNRNP48-202ENST00000496946 IGHV3-64A0A075B6Q5 118 aa1.95□□□□□ -2.1
SNRNP48-202ENST00000496946 TRGV2A0A075B6R0 118 aa1.95□□□□□ -2.1
SNRNP48-202ENST00000496946 NUPR2A6NF83 97 aa1.95□□□□□ -2.1
SNRNP48-202ENST00000496946 PRB2P02812 416 aaPredicted RBP1.95□□□□□ -2.1
SNRNP48-202ENST00000496946 PRB1P04280 392 aa1.95□□□□□ -2.1
SNRNP48-202ENST00000496946 RNASE3P12724 160 aaKnown RBP1.95□□□□□ -2.1
SNRNP48-202ENST00000496946 CCL18P55774 89 aa1.95□□□□□ -2.1
SNRNP48-202ENST00000496946 LYZP61626 148 aa1.95□□□□□ -2.1
SNRNP48-202ENST00000496946 COA5Q86WW8 74 aa1.95□□□□□ -2.1
SNRNP48-202ENST00000496946 C15orf56Q8N910 161 aa1.95□□□□□ -2.1
SNRNP48-202ENST00000496946 C16orf74Q96GX8 76 aa1.95□□□□□ -2.1
SNRNP48-202ENST00000496946 MINOS1-NBL1R4GNA1 71 aa1.95□□□□□ -2.1
SNRNP48-202ENST00000496946 IGLV4-60A0A075B6I1 120 aa1.94□□□□□ -2.1
SNRNP48-202ENST00000496946 KRTAP26-1Q6PEX3 210 aa1.94□□□□□ -2.1
SNRNP48-202ENST00000496946 SPATA8Q6RVD6 105 aa1.94□□□□□ -2.1
SNRNP48-202ENST00000496946 KRTAP7-1Q8IUC3 87 aa1.94□□□□□ -2.1
SNRNP48-202ENST00000496946 NOTCH3Q9UM47 2321 aa1.94□□□□□ -2.1
SNRNP48-202ENST00000496946 TRGV4A0A0C4DH28 118 aa1.94□□□□□ -2.1
SNRNP48-202ENST00000496946 UQCR11O14957 56 aa1.94□□□□□ -2.1
SNRNP48-202ENST00000496946 TMEM105Q8N8V8 129 aa1.94□□□□□ -2.1
SNRNP48-202ENST00000496946 ZNRD1Q9P1U0 126 aa1.94□□□□□ -2.1
SNRNP48-202ENST00000496946 KNTC1P50748 2209 aa1.94□□□□□ -2.1
SNRNP48-202ENST00000496946 IGKV3-7A0A075B6H7 116 aa1.93□□□□□ -2.1
SNRNP48-202ENST00000496946 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.93□□□□□ -2.1
SNRNP48-202ENST00000496946 SMIM11BQ8TCY0 68 aa1.93□□□□□ -2.1
SNRNP48-202ENST00000496946 KCNQ1DNQ9H478 68 aa1.93□□□□□ -2.1
SNRNP48-202ENST00000496946 ABCA4P78363 2273 aa1.93□□□□□ -2.1
SNRNP48-202ENST00000496946 CCL3L1P16619 93 aa1.93□□□□□ -2.1
SNRNP48-202ENST00000496946 PRCDQ00LT1 54 aa1.93□□□□□ -2.1
SNRNP48-202ENST00000496946 SPRR4Q96PI1 79 aa1.93□□□□□ -2.1
SNRNP48-202ENST00000496946 LINC00959A0A1B0GUT2 108 aa1.92□□□□□ -2.1
SNRNP48-202ENST00000496946 PANO1I0J062 215 aa1.92□□□□□ -2.1
SNRNP48-202ENST00000496946 TNRC18O15417 2968 aaPredicted RBP1.92□□□□□ -2.1
SNRNP48-202ENST00000496946 Q8N377 158 aa1.92□□□□□ -2.1
SNRNP48-202ENST00000496946 FBN3Q75N90 2809 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms