RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 TRBV30A0A0K0K1B3 111 aa14.34□□□□□ -0.11
CHRD-217ENST00000496527 CKS1BP61024 79 aa14.34□□□□□ -0.11
CHRD-217ENST00000496527 VPS13BQ7Z7G8 4022 aa14.34□□□□□ -0.11
CHRD-217ENST00000496527 C7orf33Q8WU49 177 aa14.33□□□□□ -0.12
CHRD-217ENST00000496527 HSBP1O75506 76 aa14.32□□□□□ -0.12
CHRD-217ENST00000496527 KRTAP10-4P60372 401 aaPredicted RBP14.32□□□□□ -0.12
CHRD-217ENST00000496527 SMIM1B2RUZ4 78 aa14.31□□□□□ -0.12
CHRD-217ENST00000496527 TLX1NBP0CAT3 122 aa14.31□□□□□ -0.12
CHRD-217ENST00000496527 IGLC3P0DOY3 106 aa14.31□□□□□ -0.12
CHRD-217ENST00000496527 H3BRM9 83 aa14.3□□□□□ -0.12
CHRD-217ENST00000496527 SCO1O75880 301 aa14.3□□□□□ -0.12
CHRD-217ENST00000496527 SPINK8P0C7L1 97 aa14.29□□□□□ -0.12
CHRD-217ENST00000496527 Q6ZRP5 223 aa14.28□□□□□ -0.12
CHRD-217ENST00000496527 CXCL5P42830 114 aa14.27□□□□□ -0.13
CHRD-217ENST00000496527 GAGE2EQ4V326 116 aa14.27□□□□□ -0.13
CHRD-217ENST00000496527 FAM19A2Q8N3H0 131 aa14.27□□□□□ -0.13
CHRD-217ENST00000496527 COX7B2Q8TF08 81 aa14.27□□□□□ -0.13
CHRD-217ENST00000496527 IFI27L1Q96BM0 104 aa14.27□□□□□ -0.13
CHRD-217ENST00000496527 GAGE2DQ9UEU5 116 aa14.27□□□□□ -0.13
CHRD-217ENST00000496527 A0A1W2PNN7 141 aa14.26□□□□□ -0.13
CHRD-217ENST00000496527 C9orf116Q5BN46 136 aaPredicted RBP14.26□□□□□ -0.13
CHRD-217ENST00000496527 NDUFC2-KCTD14E9PQ53 114 aa14.25□□□□□ -0.13
CHRD-217ENST00000496527 F8VRH5 84 aa14.25□□□□□ -0.13
CHRD-217ENST00000496527 SERF1AO75920 110 aa14.25□□□□□ -0.13
CHRD-217ENST00000496527 FLG2Q5D862 2391 aaPredicted RBP14.25□□□□□ -0.13
CHRD-217ENST00000496527 ZNF22P17026 224 aaPredicted RBP14.24□□□□□ -0.13
CHRD-217ENST00000496527 CHTOPQ9Y3Y2 248 aaKnown RBP14.24□□□□□ -0.13
CHRD-217ENST00000496527 TRAV12-1A0A0B4J245 112 aa14.22□□□□□ -0.13
CHRD-217ENST00000496527 C11orf86A6NJI1 115 aa14.22□□□□□ -0.13
CHRD-217ENST00000496527 LINC00310P59036 64 aa14.22□□□□□ -0.13
CHRD-217ENST00000496527 TMEM170BQ5T4T1 132 aa14.21□□□□□ -0.13
CHRD-217ENST00000496527 LEPROTL1O95214 131 aa14.19□□□□□ -0.14
CHRD-217ENST00000496527 IGLV5-39A0A0G2JS06 123 aa14.18□□□□□ -0.14
CHRD-217ENST00000496527 NUPR1O60356 82 aa14.18□□□□□ -0.14
CHRD-217ENST00000496527 FAM168BA1KXE4 195 aa14.17□□□□□ -0.14
CHRD-217ENST00000496527 HNRNPA3P51991 378 aaKnown RBP14.17□□□□□ -0.14
CHRD-217ENST00000496527 PRR3P79522 188 aaKnown RBP14.17□□□□□ -0.14
CHRD-217ENST00000496527 FAM19A5Q7Z5A7 132 aaPredicted RBP14.16□□□□□ -0.14
CHRD-217ENST00000496527 H0Y8G0 127 aa14.15□□□□□ -0.14
CHRD-217ENST00000496527 C9orf129Q5T035 196 aaKnown RBP14.15□□□□□ -0.14
CHRD-217ENST00000496527 PHF5AQ7RTV0 110 aaKnown RBP14.15□□□□□ -0.14
CHRD-217ENST00000496527 HSPB8Q9UJY1 196 aa14.15□□□□□ -0.14
CHRD-217ENST00000496527 HIST1H2BKO60814 126 aa14.14□□□□□ -0.15
CHRD-217ENST00000496527 HIST1H2BJP06899 126 aa14.14□□□□□ -0.15
CHRD-217ENST00000496527 HIST1H2BOP23527 126 aa14.14□□□□□ -0.15
CHRD-217ENST00000496527 HIST1H2BBP33778 126 aa14.14□□□□□ -0.15
CHRD-217ENST00000496527 HIST1H2BDP58876 126 aa14.14□□□□□ -0.15
CHRD-217ENST00000496527 HIST1H2BCP62807 126 aa14.14□□□□□ -0.15
CHRD-217ENST00000496527 HIST2H2BEQ16778 126 aa14.14□□□□□ -0.15
CHRD-217ENST00000496527 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.14□□□□□ -0.15
CHRD-217ENST00000496527 HIST1H2BHQ93079 126 aa14.14□□□□□ -0.15
CHRD-217ENST00000496527 HIST1H2BNQ99877 126 aa14.14□□□□□ -0.15
CHRD-217ENST00000496527 HIST1H2BMQ99879 126 aa14.14□□□□□ -0.15
CHRD-217ENST00000496527 FABP4P15090 132 aa14.13□□□□□ -0.15
CHRD-217ENST00000496527 XAGE1AQ9HD64 81 aa14.12□□□□□ -0.15
CHRD-217ENST00000496527 TMEM223A0PJW6 202 aa14.1□□□□□ -0.15
CHRD-217ENST00000496527 ODF1Q14990 250 aa14.1□□□□□ -0.15
CHRD-217ENST00000496527 MYCBP2O75592 4640 aa14.1□□□□□ -0.15
CHRD-217ENST00000496527 KRTAP29-1A8MX34 341 aaPredicted RBP14.09□□□□□ -0.15
CHRD-217ENST00000496527 J3QL48 77 aa14.09□□□□□ -0.15
CHRD-217ENST00000496527 M0QXV9 152 aa14.09□□□□□ -0.15
CHRD-217ENST00000496527 KRTAP7-1Q8IUC3 87 aa14.09□□□□□ -0.15
CHRD-217ENST00000496527 SFTA2Q6UW10 78 aa14.08□□□□□ -0.16
CHRD-217ENST00000496527 S100A1P23297 94 aa14.07□□□□□ -0.16
CHRD-217ENST00000496527 PSORS1C2Q9UIG4 136 aa14.07□□□□□ -0.16
CHRD-217ENST00000496527 OXTP01178 125 aa14.06□□□□□ -0.16
CHRD-217ENST00000496527 PFN2P35080 140 aa14.05□□□□□ -0.16
CHRD-217ENST00000496527 SERTAD4-AS1Q5TG53 156 aa14.05□□□□□ -0.16
CHRD-217ENST00000496527 MAP1LC3CQ9BXW4 147 aa14.05□□□□□ -0.16
CHRD-217ENST00000496527 DMBT1Q9UGM3 2413 aaPredicted RBP14.05□□□□□ -0.16
CHRD-217ENST00000496527 PLNP26678 52 aa14.04□□□□□ -0.16
CHRD-217ENST00000496527 UBE2BP63146 152 aa14.04□□□□□ -0.16
CHRD-217ENST00000496527 ZNF625Q96I27 306 aaPredicted RBP14.04□□□□□ -0.16
CHRD-217ENST00000496527 ERG28Q9UKR5 140 aa14.04□□□□□ -0.16
CHRD-217ENST00000496527 C1orf137Q5JT78 98 aa14.03□□□□□ -0.16
CHRD-217ENST00000496527 COX17Q14061 63 aa14.02□□□□□ -0.17
CHRD-217ENST00000496527 C22orf24Q9Y442 160 aa14.02□□□□□ -0.17
CHRD-217ENST00000496527 DPM2O94777 84 aa14.01□□□□□ -0.17
CHRD-217ENST00000496527 SPINK6Q6UWN8 80 aa14.01□□□□□ -0.17
CHRD-217ENST00000496527 ATP6V1G1O75348 118 aa14□□□□□ -0.17
CHRD-217ENST00000496527 LBHQ53QV2 105 aaPredicted RBP14□□□□□ -0.17
CHRD-217ENST00000496527 KRTAP11-1Q8IUC1 163 aa14□□□□□ -0.17
CHRD-217ENST00000496527 PMCHL2Q9BQD1 86 aa14□□□□□ -0.17
CHRD-217ENST00000496527 PLA2G2DQ9UNK4 145 aa13.99□□□□□ -0.17
CHRD-217ENST00000496527 IGKCP01834 107 aa13.98□□□□□ -0.17
CHRD-217ENST00000496527 SRSF9Q13242 221 aaKnown RBP eCLIP13.98□□□□□ -0.178e-9■■■□□ 15.4
CHRD-217ENST00000496527 TP73-AS1Q9UF72 201 aa13.98□□□□□ -0.17
CHRD-217ENST00000496527 PKHD1L1Q86WI1 4243 aa13.98□□□□□ -0.17
CHRD-217ENST00000496527 COA6Q5JTJ3 125 aaKnown RBP13.97□□□□□ -0.17
CHRD-217ENST00000496527 HERVK_113P61574 105 aa13.96□□□□□ -0.17
CHRD-217ENST00000496527 MRPL55Q7Z7F7 128 aaKnown RBP13.96□□□□□ -0.17
CHRD-217ENST00000496527 SND1-IT1Q9HBX3 110 aa13.96□□□□□ -0.17
CHRD-217ENST00000496527 SYS1-DBNDD2H3BUS1 97 aa13.95□□□□□ -0.18
CHRD-217ENST00000496527 LEPROTO15243 131 aa13.95□□□□□ -0.18
CHRD-217ENST00000496527 LINC00158P58513 81 aa13.95□□□□□ -0.18
CHRD-217ENST00000496527 NDUFA12Q9UI09 145 aa13.95□□□□□ -0.18
CHRD-217ENST00000496527 IGLV7-43P04211 117 aa13.94□□□□□ -0.18
CHRD-217ENST00000496527 HERV-K104P63124 156 aa13.94□□□□□ -0.18
CHRD-217ENST00000496527 NKAPP1Q8N9T2 125 aa13.94□□□□□ -0.18
CHRD-217ENST00000496527 PLEKHB2Q96CS7 222 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms