RNA–Protein interactions for RNA: ENST00000496143.5

PPM1F-208, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 4

Gene PPM1F, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-208ENST00000496143 YPEL4Q96NS1 127 aa13.3□□□□□ -0.28
PPM1F-208ENST00000496143 PRR3P79522 188 aaKnown RBP13.29□□□□□ -0.28
PPM1F-208ENST00000496143 A0A1W2PNN7 141 aa13.28□□□□□ -0.28
PPM1F-208ENST00000496143 Q6ZRP5 223 aa13.28□□□□□ -0.28
PPM1F-208ENST00000496143 CXCL5P42830 114 aa13.27□□□□□ -0.29
PPM1F-208ENST00000496143 URB1-AS1Q96HZ7 61 aa13.27□□□□□ -0.29
PPM1F-208ENST00000496143 IGLV5-45A0A087WSX0 123 aa13.26□□□□□ -0.29
PPM1F-208ENST00000496143 NDUFC2-KCTD14E9PQ53 114 aa13.26□□□□□ -0.29
PPM1F-208ENST00000496143 GAGE2EQ4V326 116 aa13.26□□□□□ -0.29
PPM1F-208ENST00000496143 PDZD11Q5EBL8 140 aa13.26□□□□□ -0.29
PPM1F-208ENST00000496143 GAGE2DQ9UEU5 116 aa13.26□□□□□ -0.29
PPM1F-208ENST00000496143 A0A096LNJ9 63 aa13.25□□□□□ -0.29
PPM1F-208ENST00000496143 H3BRM9 83 aa13.25□□□□□ -0.29
PPM1F-208ENST00000496143 ATP5LO75964 103 aa13.25□□□□□ -0.29
PPM1F-208ENST00000496143 NDUFA6P56556 154 aa13.25□□□□□ -0.29
PPM1F-208ENST00000496143 CBLN2Q8IUK8 224 aa13.25□□□□□ -0.29
PPM1F-208ENST00000496143 SMIM1B2RUZ4 78 aa13.24□□□□□ -0.29
PPM1F-208ENST00000496143 F8VRH5 84 aa13.24□□□□□ -0.29
PPM1F-208ENST00000496143 SLC7A5P1Q8MH63 180 aa13.24□□□□□ -0.29
PPM1F-208ENST00000496143 PMCHL1Q16048 86 aa13.23□□□□□ -0.29
PPM1F-208ENST00000496143 CHCHD1Q96BP2 118 aaKnown RBP13.23□□□□□ -0.29
PPM1F-208ENST00000496143 COX7B2Q8TF08 81 aa13.22□□□□□ -0.29
PPM1F-208ENST00000496143 IGLC3P0DOY3 106 aa13.2□□□□□ -0.3
PPM1F-208ENST00000496143 SPINK8P0C7L1 97 aa13.19□□□□□ -0.3
PPM1F-208ENST00000496143 PHF5AQ7RTV0 110 aaKnown RBP13.19□□□□□ -0.3
PPM1F-208ENST00000496143 FAM19A5Q7Z5A7 132 aaPredicted RBP13.19□□□□□ -0.3
PPM1F-208ENST00000496143 HERC1Q15751 4861 aa13.19□□□□□ -0.3
PPM1F-208ENST00000496143 FAM168BA1KXE4 195 aa13.17□□□□□ -0.3
PPM1F-208ENST00000496143 SPINK6Q6UWN8 80 aa13.17□□□□□ -0.3
PPM1F-208ENST00000496143 BAGE3Q86Y29 109 aa13.17□□□□□ -0.3
PPM1F-208ENST00000496143 M0QXV9 152 aa13.15□□□□□ -0.3
PPM1F-208ENST00000496143 HSBP1O75506 76 aa13.15□□□□□ -0.3
PPM1F-208ENST00000496143 C9orf129Q5T035 196 aaKnown RBP13.15□□□□□ -0.3
PPM1F-208ENST00000496143 PSORS1C2Q9UIG4 136 aa13.15□□□□□ -0.3
PPM1F-208ENST00000496143 TRGC2P03986 189 aa13.14□□□□□ -0.31
PPM1F-208ENST00000496143 ZNF22P17026 224 aaPredicted RBP13.14□□□□□ -0.31
PPM1F-208ENST00000496143 UBE2BP63146 152 aa13.12□□□□□ -0.31
PPM1F-208ENST00000496143 C1orf137Q5JT78 98 aa13.12□□□□□ -0.31
PPM1F-208ENST00000496143 REG3GQ6UW15 175 aa13.12□□□□□ -0.31
PPM1F-208ENST00000496143 IFI27L1Q96BM0 104 aa13.12□□□□□ -0.31
PPM1F-208ENST00000496143 CHTOPQ9Y3Y2 248 aaKnown RBP13.12□□□□□ -0.31
PPM1F-208ENST00000496143 PKHD1L1Q86WI1 4243 aa13.11□□□□□ -0.31
PPM1F-208ENST00000496143 IGLV5-39A0A0G2JS06 123 aa13.11□□□□□ -0.31
PPM1F-208ENST00000496143 TMEM170BQ5T4T1 132 aa13.11□□□□□ -0.31
PPM1F-208ENST00000496143 XAGE1AQ9HD64 81 aa13.11□□□□□ -0.31
PPM1F-208ENST00000496143 TRAV12-1A0A0B4J245 112 aa13.1□□□□□ -0.31
PPM1F-208ENST00000496143 C11orf86A6NJI1 115 aa13.1□□□□□ -0.31
PPM1F-208ENST00000496143 SRSF9Q13242 221 aaKnown RBP eCLIP13.1□□□□□ -0.31
PPM1F-208ENST00000496143 LRP1Q07954 4544 aaKnown RBP13.1□□□□□ -0.31
PPM1F-208ENST00000496143 SFTA2Q6UW10 78 aa13.08□□□□□ -0.32
PPM1F-208ENST00000496143 KRTAP7-1Q8IUC3 87 aa13.08□□□□□ -0.32
PPM1F-208ENST00000496143 ODF1Q14990 250 aa13.07□□□□□ -0.32
PPM1F-208ENST00000496143 LBHQ53QV2 105 aaPredicted RBP13.07□□□□□ -0.32
PPM1F-208ENST00000496143 SERTAD4-AS1Q5TG53 156 aa13.07□□□□□ -0.32
PPM1F-208ENST00000496143 COLCA2A8K830 154 aa13.06□□□□□ -0.32
PPM1F-208ENST00000496143 FAM19A2Q8N3H0 131 aa13.06□□□□□ -0.32
PPM1F-208ENST00000496143 FAT3Q8TDW7 4589 aa13.05□□□□□ -0.32
PPM1F-208ENST00000496143 LINC01600Q96MT4 127 aa13.05□□□□□ -0.32
PPM1F-208ENST00000496143 C22orf24Q9Y442 160 aa13.05□□□□□ -0.32
PPM1F-208ENST00000496143 SERF1AO75920 110 aa13.04□□□□□ -0.32
PPM1F-208ENST00000496143 IGLV7-43P04211 117 aa13.04□□□□□ -0.32
PPM1F-208ENST00000496143 TP73-AS1Q9UF72 201 aa13.04□□□□□ -0.32
PPM1F-208ENST00000496143 LEPROTL1O95214 131 aa13.03□□□□□ -0.32
PPM1F-208ENST00000496143 MT1HL1P0DM35 61 aa13.03□□□□□ -0.32
PPM1F-208ENST00000496143 KRTAP11-1Q8IUC1 163 aa13.02□□□□□ -0.33
PPM1F-208ENST00000496143 DIRC1Q969H9 104 aa13.02□□□□□ -0.33
PPM1F-208ENST00000496143 PFN2P35080 140 aa13.01□□□□□ -0.33
PPM1F-208ENST00000496143 COX17Q14061 63 aa13.01□□□□□ -0.33
PPM1F-208ENST00000496143 MRPL55Q7Z7F7 128 aaKnown RBP13.01□□□□□ -0.33
PPM1F-208ENST00000496143 ERG28Q9UKR5 140 aa13.01□□□□□ -0.33
PPM1F-208ENST00000496143 PLA2G2DQ9UNK4 145 aa13.01□□□□□ -0.33
PPM1F-208ENST00000496143 TMEM223A0PJW6 202 aa13□□□□□ -0.33
PPM1F-208ENST00000496143 HSPB8Q9UJY1 196 aa13□□□□□ -0.33
PPM1F-208ENST00000496143 H0Y8G0 127 aa12.98□□□□□ -0.33
PPM1F-208ENST00000496143 NUPR1O60356 82 aa12.98□□□□□ -0.33
PPM1F-208ENST00000496143 LINC00310P59036 64 aa12.98□□□□□ -0.33
PPM1F-208ENST00000496143 NKAPP1Q8N9T2 125 aa12.98□□□□□ -0.33
PPM1F-208ENST00000496143 ZNF625Q96I27 306 aaPredicted RBP12.97□□□□□ -0.33
PPM1F-208ENST00000496143 IGLV5-37A0A075B6J1 123 aa12.95□□□□□ -0.34
PPM1F-208ENST00000496143 H0Y9J4 135 aa12.94□□□□□ -0.34
PPM1F-208ENST00000496143 PLNP26678 52 aa12.94□□□□□ -0.34
PPM1F-208ENST00000496143 SCO1O75880 301 aa12.93□□□□□ -0.34
PPM1F-208ENST00000496143 FABP4P15090 132 aa12.93□□□□□ -0.34
PPM1F-208ENST00000496143 LINC00167Q96N53 147 aa12.93□□□□□ -0.34
PPM1F-208ENST00000496143 SND1-IT1Q9HBX3 110 aa12.93□□□□□ -0.34
PPM1F-208ENST00000496143 RPL24P83731 157 aaKnown RBP12.92□□□□□ -0.34
PPM1F-208ENST00000496143 LINC00158P58513 81 aa12.91□□□□□ -0.34
PPM1F-208ENST00000496143 GAGE10A6NGK3 116 aa12.9□□□□□ -0.34
PPM1F-208ENST00000496143 HERV-K104P63124 156 aa12.9□□□□□ -0.34
PPM1F-208ENST00000496143 MAP1LC3CQ9BXW4 147 aa12.9□□□□□ -0.34
PPM1F-208ENST00000496143 RPL37AP8A6NKH3 93 aa12.89□□□□□ -0.35
PPM1F-208ENST00000496143 LINC00587B1AMM8 73 aa12.89□□□□□ -0.35
PPM1F-208ENST00000496143 ZNF861PO60384 105 aa12.89□□□□□ -0.35
PPM1F-208ENST00000496143 ATP6V1G1O75348 118 aa12.89□□□□□ -0.35
PPM1F-208ENST00000496143 DPM2O94777 84 aa12.89□□□□□ -0.35
PPM1F-208ENST00000496143 KRTAP10-8P60410 259 aa12.89□□□□□ -0.35
PPM1F-208ENST00000496143 BCE1O60756 84 aa12.88□□□□□ -0.35
PPM1F-208ENST00000496143 HIST1H2BKO60814 126 aa12.88□□□□□ -0.35
PPM1F-208ENST00000496143 HIST1H2BJP06899 126 aa12.88□□□□□ -0.35
PPM1F-208ENST00000496143 HIST1H2BOP23527 126 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms