RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 IGLV5-39A0A0G2JS06 123 aa9.48□□□□□ -0.89
HDAC9-226ENST00000496026 TMEM223A0PJW6 202 aa9.48□□□□□ -0.89
HDAC9-226ENST00000496026 CXCL5P42830 114 aa9.48□□□□□ -0.89
HDAC9-226ENST00000496026 FAM30AQ9NZY2 134 aa9.48□□□□□ -0.89
HDAC9-226ENST00000496026 LOC107984640A0A0U1RRK4 108 aa9.47□□□□□ -0.89
HDAC9-226ENST00000496026 HIST1H2BLQ99880 126 aa9.47□□□□□ -0.89
HDAC9-226ENST00000496026 C6orf48Q9UBA6 75 aa9.47□□□□□ -0.89
HDAC9-226ENST00000496026 TRBV30A0A0K0K1B3 111 aa9.46□□□□□ -0.9
HDAC9-226ENST00000496026 C20orf202A1L168 122 aa9.46□□□□□ -0.9
HDAC9-226ENST00000496026 CDK2AP2O75956 126 aa9.46□□□□□ -0.9
HDAC9-226ENST00000496026 LINC01545Q5VT33 79 aa9.46□□□□□ -0.9
HDAC9-226ENST00000496026 Q6ZSA8 131 aa9.46□□□□□ -0.9
HDAC9-226ENST00000496026 DPH3Q96FX2 82 aa9.46□□□□□ -0.9
HDAC9-226ENST00000496026 IGKV2-24A0A0C4DH68 120 aa9.45□□□□□ -0.9
HDAC9-226ENST00000496026 C5orf52A6NGY3 159 aa9.45□□□□□ -0.9
HDAC9-226ENST00000496026 HERVK_113P61574 105 aa9.45□□□□□ -0.9
HDAC9-226ENST00000496026 RPL18AQ02543 176 aaKnown RBP9.45□□□□□ -0.9
HDAC9-226ENST00000496026 PKHD1P08F94 4074 aa9.45□□□□□ -0.9
HDAC9-226ENST00000496026 CHTF8P0CG12 524 aa9.44□□□□□ -0.9
HDAC9-226ENST00000496026 HAMPP81172 84 aa9.44□□□□□ -0.9
HDAC9-226ENST00000496026 GAGE2BQ13066 116 aa9.44□□□□□ -0.9
HDAC9-226ENST00000496026 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-226ENST00000496026 A0A096LNI7 61 aa9.43□□□□□ -0.9
HDAC9-226ENST00000496026 MAJINQ3KP22 176 aa9.43□□□□□ -0.9
HDAC9-226ENST00000496026 C9orf116Q5BN46 136 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-226ENST00000496026 LINC00474Q9P2X8 69 aa9.43□□□□□ -0.9
HDAC9-226ENST00000496026 TMA7Q9Y2S6 64 aaKnown RBP9.43□□□□□ -0.9
HDAC9-226ENST00000496026 PANO1I0J062 215 aa9.42□□□□□ -0.9
HDAC9-226ENST00000496026 PTTG1IPP53801 180 aa9.42□□□□□ -0.9
HDAC9-226ENST00000496026 XGP55808 180 aa9.42□□□□□ -0.9
HDAC9-226ENST00000496026 LEPROTO15243 131 aa9.41□□□□□ -0.9
HDAC9-226ENST00000496026 TLX1NBP0CAT3 122 aa9.41□□□□□ -0.9
HDAC9-226ENST00000496026 SFTA2Q6UW10 78 aa9.41□□□□□ -0.9
HDAC9-226ENST00000496026 SCXQ7RTU7 201 aa9.41□□□□□ -0.9
HDAC9-226ENST00000496026 SPACA4Q8TDM5 124 aa9.41□□□□□ -0.9
HDAC9-226ENST00000496026 PLEKHB2Q96CS7 222 aa9.41□□□□□ -0.9
HDAC9-226ENST00000496026 NDUFC2-KCTD14E9PQ53 114 aa9.4□□□□□ -0.9
HDAC9-226ENST00000496026 AKR1D1P51857 326 aa9.4□□□□□ -0.9
HDAC9-226ENST00000496026 CIRBPQ14011 172 aaKnown RBP9.4□□□□□ -0.9
HDAC9-226ENST00000496026 GAGE2EQ4V326 116 aa9.4□□□□□ -0.9
HDAC9-226ENST00000496026 CIRBP-AS1Q8TBR5 109 aa9.4□□□□□ -0.9
HDAC9-226ENST00000496026 GAGE2DQ9UEU5 116 aa9.4□□□□□ -0.9
HDAC9-226ENST00000496026 DYNC1H1Q14204 4646 aaKnown RBP9.39□□□□□ -0.91
HDAC9-226ENST00000496026 Q6ZRP5 223 aa9.39□□□□□ -0.91
HDAC9-226ENST00000496026 ZNF625Q96I27 306 aaPredicted RBP9.39□□□□□ -0.91
HDAC9-226ENST00000496026 E9PLD3 99 aa9.38□□□□□ -0.91
HDAC9-226ENST00000496026 J3QQQ9 107 aa9.38□□□□□ -0.91
HDAC9-226ENST00000496026 LGALS3P17931 250 aaKnown RBP9.38□□□□□ -0.91
HDAC9-226ENST00000496026 ATOH7Q8N100 152 aa9.38□□□□□ -0.91
HDAC9-226ENST00000496026 STPG4Q8N801 248 aa9.38□□□□□ -0.91
HDAC9-226ENST00000496026 NDUFA12Q9UI09 145 aa9.38□□□□□ -0.91
HDAC9-226ENST00000496026 A0A087WYN8 130 aa9.37□□□□□ -0.91
HDAC9-226ENST00000496026 MYMXA0A1B0GTQ4 84 aa9.37□□□□□ -0.91
HDAC9-226ENST00000496026 TSPEAR-AS2P59090 65 aa9.37□□□□□ -0.91
HDAC9-226ENST00000496026 ERG28Q9UKR5 140 aa9.37□□□□□ -0.91
HDAC9-226ENST00000496026 PFN2P35080 140 aa9.36□□□□□ -0.91
HDAC9-226ENST00000496026 HERV-K104P63124 156 aa9.36□□□□□ -0.91
HDAC9-226ENST00000496026 SMR3BP02814 79 aaPredicted RBP9.35□□□□□ -0.91
HDAC9-226ENST00000496026 DNAH5Q8TE73 4624 aa9.35□□□□□ -0.91
HDAC9-226ENST00000496026 SCGB1D1O95968 90 aa9.34□□□□□ -0.91
HDAC9-226ENST00000496026 NMUP48645 174 aa9.34□□□□□ -0.91
HDAC9-226ENST00000496026 COX17Q14061 63 aa9.34□□□□□ -0.91
HDAC9-226ENST00000496026 MEIG1Q5JSS6 88 aa9.34□□□□□ -0.91
HDAC9-226ENST00000496026 PLAC8Q9NZF1 115 aa9.34□□□□□ -0.91
HDAC9-226ENST00000496026 BIRC6Q9NR09 4857 aa9.33□□□□□ -0.92
HDAC9-226ENST00000496026 LRP1BQ9NZR2 4599 aa9.33□□□□□ -0.92
HDAC9-226ENST00000496026 LINC00158P58513 81 aa9.33□□□□□ -0.92
HDAC9-226ENST00000496026 XAGE1AQ9HD64 81 aa9.33□□□□□ -0.92
HDAC9-226ENST00000496026 A0A1W2PNN7 141 aa9.32□□□□□ -0.92
HDAC9-226ENST00000496026 LINC00587B1AMM8 73 aa9.32□□□□□ -0.92
HDAC9-226ENST00000496026 C9orf129Q5T035 196 aaKnown RBP9.32□□□□□ -0.92
HDAC9-226ENST00000496026 A0A0U1RRA0 63 aa9.31□□□□□ -0.92
HDAC9-226ENST00000496026 HSBP1L1C9JCN9 74 aa9.31□□□□□ -0.92
HDAC9-226ENST00000496026 IGKV2D-26A0A0A0MRZ7 120 aa9.3□□□□□ -0.92
HDAC9-226ENST00000496026 FAM168BA1KXE4 195 aa9.3□□□□□ -0.92
HDAC9-226ENST00000496026 SMIM13P0DJ93 91 aa9.3□□□□□ -0.92
HDAC9-226ENST00000496026 ANKRD39Q53RE8 183 aa9.3□□□□□ -0.92
HDAC9-226ENST00000496026 FAM19A5Q7Z5A7 132 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-226ENST00000496026 LINC00528Q8N1L1 170 aa9.3□□□□□ -0.92
HDAC9-226ENST00000496026 FAM229AH3BQW9 127 aa9.29□□□□□ -0.92
HDAC9-226ENST00000496026 Q8N1X5 172 aa9.29□□□□□ -0.92
HDAC9-226ENST00000496026 ZNF815PA8K554 130 aa9.28□□□□□ -0.92
HDAC9-226ENST00000496026 C7orf33Q8WU49 177 aa9.28□□□□□ -0.92
HDAC9-226ENST00000496026 SND1-IT1Q9HBX3 110 aa9.28□□□□□ -0.92
HDAC9-226ENST00000496026 EPM2AB3EWF7 344 aa9.27□□□□□ -0.93
HDAC9-226ENST00000496026 TTTY13Q9BZ97 58 aa9.27□□□□□ -0.93
HDAC9-226ENST00000496026 A0A0J9YXY3 114 aa9.26□□□□□ -0.93
HDAC9-226ENST00000496026 SERTAD4-AS1Q5TG53 156 aa9.26□□□□□ -0.93
HDAC9-226ENST00000496026 Q5VSD8 79 aa9.26□□□□□ -0.93
HDAC9-226ENST00000496026 MIR7-3HGQ8N6C7 128 aa9.26□□□□□ -0.93
HDAC9-226ENST00000496026 KIAA1109Q2LD37 5005 aa9.26□□□□□ -0.93
HDAC9-226ENST00000496026 M0QXV9 152 aa9.25□□□□□ -0.93
HDAC9-226ENST00000496026 PHF5AQ7RTV0 110 aaKnown RBP9.25□□□□□ -0.93
HDAC9-226ENST00000496026 APOBP04114 4563 aaKnown RBP9.24□□□□□ -0.93
HDAC9-226ENST00000496026 JOSD1Q15040 202 aaPredicted RBP9.24□□□□□ -0.93
HDAC9-226ENST00000496026 KRTAP7-1Q8IUC3 87 aa9.24□□□□□ -0.93
HDAC9-226ENST00000496026 KRTAP17-1Q9BYP8 105 aa9.24□□□□□ -0.93
HDAC9-226ENST00000496026 PLA2G2DQ9UNK4 145 aa9.24□□□□□ -0.93
HDAC9-226ENST00000496026 PLA2G1BP04054 148 aaKnown RBP9.23□□□□□ -0.93
HDAC9-226ENST00000496026 RPL37AP61513 92 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms