RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 TMEM170BQ5T4T1 132 aa7.74□□□□□ -1.17
CSNK1E-213ENST00000495232 UNQ6190/PRO20217Q6UXQ8 127 aa7.74□□□□□ -1.17
CSNK1E-213ENST00000495232 CIRBP-AS1Q8TBR5 109 aa7.74□□□□□ -1.17
CSNK1E-213ENST00000495232 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.74□□□□□ -1.17
CSNK1E-213ENST00000495232 SMIM1B2RUZ4 78 aa7.73□□□□□ -1.17
CSNK1E-213ENST00000495232 CHTF8P0CG12 524 aa7.73□□□□□ -1.17
CSNK1E-213ENST00000495232 RPL18AQ02543 176 aaKnown RBP7.73□□□□□ -1.17
CSNK1E-213ENST00000495232 MAJINQ3KP22 176 aa7.73□□□□□ -1.17
CSNK1E-213ENST00000495232 C2orf82Q6UX34 121 aa7.73□□□□□ -1.17
CSNK1E-213ENST00000495232 Q8N1X5 172 aa7.73□□□□□ -1.17
CSNK1E-213ENST00000495232 A0A096LNI7 61 aa7.72□□□□□ -1.17
CSNK1E-213ENST00000495232 TRBV30A0A0K0K1B3 111 aa7.72□□□□□ -1.17
CSNK1E-213ENST00000495232 F8VRH5 84 aa7.72□□□□□ -1.17
CSNK1E-213ENST00000495232 ZNF22P17026 224 aaPredicted RBP7.72□□□□□ -1.17
CSNK1E-213ENST00000495232 CXCL5P42830 114 aa7.72□□□□□ -1.17
CSNK1E-213ENST00000495232 GAGE2BQ13066 116 aa7.72□□□□□ -1.17
CSNK1E-213ENST00000495232 C10orf25Q5T742 122 aa7.72□□□□□ -1.17
CSNK1E-213ENST00000495232 SPACA4Q8TDM5 124 aa7.72□□□□□ -1.17
CSNK1E-213ENST00000495232 COX7B2Q8TF08 81 aa7.72□□□□□ -1.17
CSNK1E-213ENST00000495232 MAP1LC3CQ9BXW4 147 aa7.72□□□□□ -1.17
CSNK1E-213ENST00000495232 C11orf86A6NJI1 115 aa7.71□□□□□ -1.18
CSNK1E-213ENST00000495232 EPM2AB3EWF7 344 aa7.71□□□□□ -1.18
CSNK1E-213ENST00000495232 PANO1I0J062 215 aa7.71□□□□□ -1.18
CSNK1E-213ENST00000495232 CIRBPQ14011 172 aaKnown RBP7.71□□□□□ -1.18
CSNK1E-213ENST00000495232 C6orf48Q9UBA6 75 aa7.71□□□□□ -1.18
CSNK1E-213ENST00000495232 A0A087WYN8 130 aa7.7□□□□□ -1.18
CSNK1E-213ENST00000495232 PTTG1IPP53801 180 aa7.7□□□□□ -1.18
CSNK1E-213ENST00000495232 STPG4Q8N801 248 aa7.7□□□□□ -1.18
CSNK1E-213ENST00000495232 ODF1Q14990 250 aa7.69□□□□□ -1.18
CSNK1E-213ENST00000495232 Q5VSD8 79 aa7.69□□□□□ -1.18
CSNK1E-213ENST00000495232 LINC00528Q8N1L1 170 aa7.69□□□□□ -1.18
CSNK1E-213ENST00000495232 NDUFC2-KCTD14E9PQ53 114 aa7.68□□□□□ -1.18
CSNK1E-213ENST00000495232 TLX1NBP0CAT3 122 aa7.68□□□□□ -1.18
CSNK1E-213ENST00000495232 PLNP26678 52 aa7.68□□□□□ -1.18
CSNK1E-213ENST00000495232 COA6Q5JTJ3 125 aaKnown RBP7.68□□□□□ -1.18
CSNK1E-213ENST00000495232 PLAC8Q9NZF1 115 aa7.68□□□□□ -1.18
CSNK1E-213ENST00000495232 FAT1Q14517 4588 aa7.67□□□□□ -1.18
CSNK1E-213ENST00000495232 IGLV5-39A0A0G2JS06 123 aa7.67□□□□□ -1.18
CSNK1E-213ENST00000495232 PLA2G1BP04054 148 aaKnown RBP7.67□□□□□ -1.18
CSNK1E-213ENST00000495232 GAGE2EQ4V326 116 aa7.67□□□□□ -1.18
CSNK1E-213ENST00000495232 C9orf116Q5BN46 136 aaPredicted RBP7.67□□□□□ -1.18
CSNK1E-213ENST00000495232 GAGE2DQ9UEU5 116 aa7.67□□□□□ -1.18
CSNK1E-213ENST00000495232 TMEM223A0PJW6 202 aa7.66□□□□□ -1.18
CSNK1E-213ENST00000495232 DPM2O94777 84 aa7.66□□□□□ -1.18
CSNK1E-213ENST00000495232 SFTA2Q6UW10 78 aa7.66□□□□□ -1.18
CSNK1E-213ENST00000495232 Q6ZRP5 223 aa7.66□□□□□ -1.18
CSNK1E-213ENST00000495232 IGKCP01834 107 aa7.65□□□□□ -1.18
CSNK1E-213ENST00000495232 S100A6P06703 90 aa7.65□□□□□ -1.18
CSNK1E-213ENST00000495232 C7orf33Q8WU49 177 aa7.65□□□□□ -1.18
CSNK1E-213ENST00000495232 SYS1-DBNDD2H3BUS1 97 aa7.64□□□□□ -1.19
CSNK1E-213ENST00000495232 HERVK_113P61574 105 aa7.64□□□□□ -1.19
CSNK1E-213ENST00000495232 PMCHL2Q9BQD1 86 aa7.64□□□□□ -1.19
CSNK1E-213ENST00000495232 S100A2P29034 98 aa7.63□□□□□ -1.19
CSNK1E-213ENST00000495232 PET117Q6UWS5 81 aa7.63□□□□□ -1.19
CSNK1E-213ENST00000495232 KRTDAPP60985 99 aa7.62□□□□□ -1.19
CSNK1E-213ENST00000495232 RPL37AP61513 92 aaKnown RBP7.62□□□□□ -1.19
CSNK1E-213ENST00000495232 KRTAP4-5Q9BYR2 181 aa7.62□□□□□ -1.19
CSNK1E-213ENST00000495232 VPS13BQ7Z7G8 4022 aa7.62□□□□□ -1.19
CSNK1E-213ENST00000495232 A0A1W2PNN7 141 aa7.61□□□□□ -1.19
CSNK1E-213ENST00000495232 C3orf79P0CE67 100 aa7.61□□□□□ -1.19
CSNK1E-213ENST00000495232 PFN2P35080 140 aa7.61□□□□□ -1.19
CSNK1E-213ENST00000495232 ZNF625Q96I27 306 aaPredicted RBP7.61□□□□□ -1.19
CSNK1E-213ENST00000495232 SRRM2Q9UQ35 2752 aaKnown RBP7.6□□□□□ -1.19
CSNK1E-213ENST00000495232 C20orf202A1L168 122 aa7.6□□□□□ -1.19
CSNK1E-213ENST00000495232 COX17Q14061 63 aa7.6□□□□□ -1.19
CSNK1E-213ENST00000495232 FAM19A5Q7Z5A7 132 aaPredicted RBP7.6□□□□□ -1.19
CSNK1E-213ENST00000495232 PLEKHB2Q96CS7 222 aa7.6□□□□□ -1.19
CSNK1E-213ENST00000495232 XAGE1AQ9HD64 81 aa7.6□□□□□ -1.19
CSNK1E-213ENST00000495232 ERG28Q9UKR5 140 aa7.6□□□□□ -1.19
CSNK1E-213ENST00000495232 MYMXA0A1B0GTQ4 84 aa7.59□□□□□ -1.19
CSNK1E-213ENST00000495232 FAM168BA1KXE4 195 aa7.59□□□□□ -1.19
CSNK1E-213ENST00000495232 LEPROTO15243 131 aa7.59□□□□□ -1.19
CSNK1E-213ENST00000495232 HERV-K104P63124 156 aa7.59□□□□□ -1.19
CSNK1E-213ENST00000495232 C9orf129Q5T035 196 aaKnown RBP7.59□□□□□ -1.19
CSNK1E-213ENST00000495232 LINC01545Q5VT33 79 aa7.59□□□□□ -1.19
CSNK1E-213ENST00000495232 LINC00587B1AMM8 73 aa7.58□□□□□ -1.2
CSNK1E-213ENST00000495232 INAFM2P0DMQ5 153 aa7.58□□□□□ -1.2
CSNK1E-213ENST00000495232 LGALS3P17931 250 aaKnown RBP7.58□□□□□ -1.2
CSNK1E-213ENST00000495232 MEIG1Q5JSS6 88 aa7.58□□□□□ -1.2
CSNK1E-213ENST00000495232 NDUFA12Q9UI09 145 aa7.58□□□□□ -1.2
CSNK1E-213ENST00000495232 J3QQQ9 107 aa7.57□□□□□ -1.2
CSNK1E-213ENST00000495232 AKR1D1P51857 326 aa7.57□□□□□ -1.2
CSNK1E-213ENST00000495232 LINC00158P58513 81 aa7.57□□□□□ -1.2
CSNK1E-213ENST00000495232 PHF5AQ7RTV0 110 aaKnown RBP7.57□□□□□ -1.2
CSNK1E-213ENST00000495232 HIST3H2BBQ8N257 126 aa7.57□□□□□ -1.2
CSNK1E-213ENST00000495232 ABCA13Q86UQ4 5058 aa7.57□□□□□ -1.2
CSNK1E-213ENST00000495232 M0QXV9 152 aa7.56□□□□□ -1.2
CSNK1E-213ENST00000495232 PCLOQ9Y6V0 5065 aa7.56□□□□□ -1.2
CSNK1E-213ENST00000495232 E9PLD3 99 aa7.55□□□□□ -1.2
CSNK1E-213ENST00000495232 NMUP48645 174 aa7.55□□□□□ -1.2
CSNK1E-213ENST00000495232 SNRPEP62304 92 aaKnown RBP7.55□□□□□ -1.2
CSNK1E-213ENST00000495232 UBE2BP63146 152 aa7.55□□□□□ -1.2
CSNK1E-213ENST00000495232 HIST1H2BLQ99880 126 aa7.55□□□□□ -1.2
CSNK1E-213ENST00000495232 A0A0U1RRA0 63 aa7.54□□□□□ -1.2
CSNK1E-213ENST00000495232 TSPEAR-AS2P59090 65 aa7.54□□□□□ -1.2
CSNK1E-213ENST00000495232 LBHQ53QV2 105 aaPredicted RBP7.54□□□□□ -1.2
CSNK1E-213ENST00000495232 SND1-IT1Q9HBX3 110 aa7.54□□□□□ -1.2
CSNK1E-213ENST00000495232 SMIM13P0DJ93 91 aa7.53□□□□□ -1.2
CSNK1E-213ENST00000495232 PRR3P79522 188 aaKnown RBP7.53□□□□□ -1.2
CSNK1E-213ENST00000495232 RPL24P83731 157 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms