RNA–Protein interactions for RNA: ENST00000494655.5

CCDC12-207, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-207ENST00000494655 CXCL5P42830 114 aa13.09□□□□□ -0.31
CCDC12-207ENST00000494655 C2orf82Q6UX34 121 aa13.09□□□□□ -0.31
CCDC12-207ENST00000494655 BAGE3Q86Y29 109 aa13.09□□□□□ -0.31
CCDC12-207ENST00000494655 IGLV5-45A0A087WSX0 123 aa13.08□□□□□ -0.32
CCDC12-207ENST00000494655 KRTAP10-4P60372 401 aaPredicted RBP13.08□□□□□ -0.32
CCDC12-207ENST00000494655 PDZD11Q5EBL8 140 aa13.08□□□□□ -0.32
CCDC12-207ENST00000494655 HSBP1O75506 76 aa13.07□□□□□ -0.32
CCDC12-207ENST00000494655 SMIM1B2RUZ4 78 aa13.06□□□□□ -0.32
CCDC12-207ENST00000494655 TRGC2P03986 189 aa13.06□□□□□ -0.32
CCDC12-207ENST00000494655 NDUFC2-KCTD14E9PQ53 114 aa13.05□□□□□ -0.32
CCDC12-207ENST00000494655 F8VRH5 84 aa13.05□□□□□ -0.32
CCDC12-207ENST00000494655 IGLC3P0DOY3 106 aa13.05□□□□□ -0.32
CCDC12-207ENST00000494655 GAGE2EQ4V326 116 aa13.05□□□□□ -0.32
CCDC12-207ENST00000494655 C9orf116Q5BN46 136 aaPredicted RBP13.05□□□□□ -0.32
CCDC12-207ENST00000494655 GAGE2DQ9UEU5 116 aa13.05□□□□□ -0.32
CCDC12-207ENST00000494655 FLG2Q5D862 2391 aaPredicted RBP13.05□□□□□ -0.32
CCDC12-207ENST00000494655 Q6ZRP5 223 aa13.04□□□□□ -0.32
CCDC12-207ENST00000494655 COX7B2Q8TF08 81 aa13.04□□□□□ -0.32
CCDC12-207ENST00000494655 SPINK8P0C7L1 97 aa13.03□□□□□ -0.32
CCDC12-207ENST00000494655 J3QL48 77 aa13.02□□□□□ -0.33
CCDC12-207ENST00000494655 PRR3P79522 188 aaKnown RBP13.01□□□□□ -0.33
CCDC12-207ENST00000494655 A0A1W2PNN7 141 aa13□□□□□ -0.33
CCDC12-207ENST00000494655 IFI27L1Q96BM0 104 aa13□□□□□ -0.33
CCDC12-207ENST00000494655 COLCA2A8K830 154 aa12.99□□□□□ -0.33
CCDC12-207ENST00000494655 CHTOPQ9Y3Y2 248 aaKnown RBP12.99□□□□□ -0.33
CCDC12-207ENST00000494655 DMBT1Q9UGM3 2413 aaPredicted RBP12.99□□□□□ -0.33
CCDC12-207ENST00000494655 ZNF22P17026 224 aaPredicted RBP12.98□□□□□ -0.33
CCDC12-207ENST00000494655 TMEM170BQ5T4T1 132 aa12.98□□□□□ -0.33
CCDC12-207ENST00000494655 FAM19A5Q7Z5A7 132 aaPredicted RBP12.98□□□□□ -0.33
CCDC12-207ENST00000494655 TRAV12-1A0A0B4J245 112 aa12.96□□□□□ -0.33
CCDC12-207ENST00000494655 SERF1AO75920 110 aa12.96□□□□□ -0.33
CCDC12-207ENST00000494655 FAM19A2Q8N3H0 131 aa12.96□□□□□ -0.33
CCDC12-207ENST00000494655 C11orf86A6NJI1 115 aa12.95□□□□□ -0.34
CCDC12-207ENST00000494655 KRTAP29-1A8MX34 341 aaPredicted RBP12.95□□□□□ -0.34
CCDC12-207ENST00000494655 HNRNPA3P51991 378 aaKnown RBP12.95□□□□□ -0.34
CCDC12-207ENST00000494655 FAM168BA1KXE4 195 aa12.94□□□□□ -0.34
CCDC12-207ENST00000494655 LEPROTL1O95214 131 aa12.94□□□□□ -0.34
CCDC12-207ENST00000494655 OXTP01178 125 aa12.94□□□□□ -0.34
CCDC12-207ENST00000494655 SFTA2Q6UW10 78 aa12.94□□□□□ -0.34
CCDC12-207ENST00000494655 IGLV5-39A0A0G2JS06 123 aa12.93□□□□□ -0.34
CCDC12-207ENST00000494655 M0QXV9 152 aa12.93□□□□□ -0.34
CCDC12-207ENST00000494655 PHF5AQ7RTV0 110 aaKnown RBP12.93□□□□□ -0.34
CCDC12-207ENST00000494655 MYCBP2O75592 4640 aa12.93□□□□□ -0.34
CCDC12-207ENST00000494655 HSPB8Q9UJY1 196 aa12.92□□□□□ -0.34
CCDC12-207ENST00000494655 H0Y8G0 127 aa12.91□□□□□ -0.34
CCDC12-207ENST00000494655 SCO1O75880 301 aa12.91□□□□□ -0.34
CCDC12-207ENST00000494655 UBE2BP63146 152 aa12.91□□□□□ -0.34
CCDC12-207ENST00000494655 C9orf129Q5T035 196 aaKnown RBP12.91□□□□□ -0.34
CCDC12-207ENST00000494655 XAGE1AQ9HD64 81 aa12.9□□□□□ -0.34
CCDC12-207ENST00000494655 PSORS1C2Q9UIG4 136 aa12.88□□□□□ -0.35
CCDC12-207ENST00000494655 LINC00310P59036 64 aa12.87□□□□□ -0.35
CCDC12-207ENST00000494655 C1orf137Q5JT78 98 aa12.87□□□□□ -0.35
CCDC12-207ENST00000494655 SPINK6Q6UWN8 80 aa12.87□□□□□ -0.35
CCDC12-207ENST00000494655 FABP4P15090 132 aa12.85□□□□□ -0.35
CCDC12-207ENST00000494655 LBHQ53QV2 105 aaPredicted RBP12.85□□□□□ -0.35
CCDC12-207ENST00000494655 TMEM223A0PJW6 202 aa12.84□□□□□ -0.35
CCDC12-207ENST00000494655 PLNP26678 52 aa12.84□□□□□ -0.35
CCDC12-207ENST00000494655 PFN2P35080 140 aa12.84□□□□□ -0.35
CCDC12-207ENST00000494655 ERG28Q9UKR5 140 aa12.84□□□□□ -0.35
CCDC12-207ENST00000494655 COX17Q14061 63 aa12.83□□□□□ -0.36
CCDC12-207ENST00000494655 ODF1Q14990 250 aa12.83□□□□□ -0.36
CCDC12-207ENST00000494655 REG3GQ6UW15 175 aa12.83□□□□□ -0.36
CCDC12-207ENST00000494655 HIST1H2BKO60814 126 aa12.82□□□□□ -0.36
CCDC12-207ENST00000494655 HIST1H2BJP06899 126 aa12.82□□□□□ -0.36
CCDC12-207ENST00000494655 HIST1H2BOP23527 126 aa12.82□□□□□ -0.36
CCDC12-207ENST00000494655 HIST1H2BBP33778 126 aa12.82□□□□□ -0.36
CCDC12-207ENST00000494655 HIST1H2BDP58876 126 aa12.82□□□□□ -0.36
CCDC12-207ENST00000494655 HIST1H2BCP62807 126 aa12.82□□□□□ -0.36
CCDC12-207ENST00000494655 HIST2H2BEQ16778 126 aa12.82□□□□□ -0.36
CCDC12-207ENST00000494655 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.82□□□□□ -0.36
CCDC12-207ENST00000494655 SERTAD4-AS1Q5TG53 156 aa12.82□□□□□ -0.36
CCDC12-207ENST00000494655 HIST1H2BHQ93079 126 aa12.82□□□□□ -0.36
CCDC12-207ENST00000494655 HIST1H2BNQ99877 126 aa12.82□□□□□ -0.36
CCDC12-207ENST00000494655 HIST1H2BMQ99879 126 aa12.82□□□□□ -0.36
CCDC12-207ENST00000494655 MAP1LC3CQ9BXW4 147 aa12.82□□□□□ -0.36
CCDC12-207ENST00000494655 NUPR1O60356 82 aa12.81□□□□□ -0.36
CCDC12-207ENST00000494655 KRTAP7-1Q8IUC3 87 aa12.81□□□□□ -0.36
CCDC12-207ENST00000494655 ZNF625Q96I27 306 aaPredicted RBP12.81□□□□□ -0.36
CCDC12-207ENST00000494655 TP73-AS1Q9UF72 201 aa12.81□□□□□ -0.36
CCDC12-207ENST00000494655 NKAPP1Q8N9T2 125 aa12.8□□□□□ -0.36
CCDC12-207ENST00000494655 C22orf24Q9Y442 160 aa12.8□□□□□ -0.36
CCDC12-207ENST00000494655 HERVK_113P61574 105 aa12.79□□□□□ -0.36
CCDC12-207ENST00000494655 MRPL55Q7Z7F7 128 aaKnown RBP12.79□□□□□ -0.36
CCDC12-207ENST00000494655 PKHD1L1Q86WI1 4243 aa12.79□□□□□ -0.36
CCDC12-207ENST00000494655 DPM2O94777 84 aa12.78□□□□□ -0.36
CCDC12-207ENST00000494655 PLA2G2DQ9UNK4 145 aa12.78□□□□□ -0.36
CCDC12-207ENST00000494655 IGLV7-43P04211 117 aa12.77□□□□□ -0.37
CCDC12-207ENST00000494655 ATP6V1G1O75348 118 aa12.76□□□□□ -0.37
CCDC12-207ENST00000494655 SRSF9Q13242 221 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCDC12-207ENST00000494655 IGKCP01834 107 aa12.75□□□□□ -0.37
CCDC12-207ENST00000494655 LINC00158P58513 81 aa12.75□□□□□ -0.37
CCDC12-207ENST00000494655 HERV-K104P63124 156 aa12.75□□□□□ -0.37
CCDC12-207ENST00000494655 MEIG1Q5JSS6 88 aa12.75□□□□□ -0.37
CCDC12-207ENST00000494655 DIRC1Q969H9 104 aa12.75□□□□□ -0.37
CCDC12-207ENST00000494655 SND1-IT1Q9HBX3 110 aa12.75□□□□□ -0.37
CCDC12-207ENST00000494655 LINC00587B1AMM8 73 aa12.74□□□□□ -0.37
CCDC12-207ENST00000494655 S100A1P23297 94 aa12.74□□□□□ -0.37
CCDC12-207ENST00000494655 RPL24P83731 157 aaKnown RBP12.74□□□□□ -0.37
CCDC12-207ENST00000494655 PLEKHB2Q96CS7 222 aa12.74□□□□□ -0.37
CCDC12-207ENST00000494655 IGLV5-37A0A075B6J1 123 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms