RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 XCL2Q9UBD3 114 aa1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 IGKV2-29A2NJV5 120 aaPredicted RBP1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 K7EQD1 137 aa1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 CCL3L1P16619 93 aa1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 LYZP61626 148 aa1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 HERVK_113P63121 156 aa1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 PRR3P79522 188 aaKnown RBP1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 VMA21Q3ZAQ7 101 aa1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 KRTAP26-1Q6PEX3 210 aa1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 C3orf56Q8N813 242 aa1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 IGHV3-21A0A0B4J1V1 117 aa1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 C9JAW5 83 aa1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 KRTAP4-16G5E9R7 235 aaPredicted RBP1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 NPFFO15130 113 aa1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 PSPHP1O15172 72 aa1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 NDUFS5O43920 106 aa1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 GIG44P09565 113 aaPredicted RBP1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 EMP1P54849 157 aa1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 CXCL6P80162 114 aa1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 SERP2Q8N6R1 65 aa1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 MUC7Q8TAX7 377 aa1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 LINC00308Q8TCZ7 52 aa1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 CHCHD5Q9BSY4 110 aa1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 OCR1Q9BZK8 76 aa1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 CYP4F30PQ9H0H9 118 aa1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 GVQW2A0A096LPI5 108 aaPredicted RBP1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 ZNF815PA8K554 130 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 CCKP06307 115 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 APELAP0DMC3 54 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 CCL8P80075 99 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 CLEC19AQ6UXS0 136 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 Q6ZQT0 140 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 CHCHD10Q8WYQ3 142 aaPredicted RBP1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 INTS1Q8N201 2190 aaKnown RBP1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 IGHV3OR16-13A0A075B7E8 117 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 IGHV3-38A0A0C4DH36 116 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 A6NDX4 124 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 K7EQG2 157 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 LYZL6O75951 148 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 KRTAP5-9P26371 169 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 DAZ2Q13117 558 aaKnown RBP1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 KIAA0087Q14695 138 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 PLGLAQ15195 96 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 KLHL30-AS1Q8NEE0 82 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 KIAA0100Q14667 2235 aaKnown RBP1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 AHCTF1Q8WYP5 2266 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 HERC2O95714 4834 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 ZNF462Q96JM2 2506 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 DNAJC13O75165 2243 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 IGHV3-35A0A0C4DH35 117 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 ATOX1O00244 68 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 NTM-AS1Q6ZSK4 140 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 LINC00337Q8N6G1 96 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 SERP1Q9Y6X1 66 aa1.67□□□□□ -2.14
CDC42EP3-205ENST00000494083 PLCE1Q9P212 2302 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 IGLV6-57P01721 117 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 COX6A2Q02221 97 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 DEFB108BQ8NET1 73 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 Q8TAT8 98 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 BDP1A6H8Y1 2624 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 ABCA13Q86UQ4 5058 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 FAM236DA0A1B0GTK5 79 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 A0A1B0GW54 56 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 H7C2G1 150 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 IGHV3-53P01767 116 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 FAM236CP0DP71 79 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 ATP5EP56381 51 aaPredicted RBP1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 PHF5AQ7RTV0 110 aaKnown RBP1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 SCGB3A1Q96QR1 104 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 DPM3Q9P2X0 92 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 PKIGQ9Y2B9 76 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 PLXNB1O43157 2135 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 KNCNA6PVL3 124 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 C8orf87E5RJ46 101 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 ZNF56Q15929 161 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 Q1RN00 199 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 ESRGQ1W209 222 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 KRTAP13-3Q3SY46 172 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 C9orf153Q5TBE3 101 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 CCL17Q92583 94 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 STARD9Q9P2P6 4700 aa1.66□□□□□ -2.14
CDC42EP3-205ENST00000494083 FAM236AA0A1B0GUQ0 79 aa1.65□□□□□ -2.14
CDC42EP3-205ENST00000494083 FAM236BA0A1B0GV22 79 aa1.65□□□□□ -2.14
CDC42EP3-205ENST00000494083 RPL39P62891 51 aaKnown RBP1.65□□□□□ -2.14
CDC42EP3-205ENST00000494083 LINC00846Q9NV44 126 aa1.65□□□□□ -2.14
CDC42EP3-205ENST00000494083 NIPBLQ6KC79 2804 aaeCLIP1.65□□□□□ -2.14
CDC42EP3-205ENST00000494083 TRAV8-3A0A0A6YYJ7 113 aa1.65□□□□□ -2.15
CDC42EP3-205ENST00000494083 IGHV3-72A0A0B4J1Y9 119 aa1.65□□□□□ -2.15
CDC42EP3-205ENST00000494083 TRAV21A0A0B4J279 112 aa1.65□□□□□ -2.15
CDC42EP3-205ENST00000494083 TRBV12-3P01733 135 aa1.65□□□□□ -2.15
CDC42EP3-205ENST00000494083 HERVK_113P61574 105 aa1.65□□□□□ -2.15
CDC42EP3-205ENST00000494083 RNF182Q8N6D2 247 aa1.65□□□□□ -2.15
CDC42EP3-205ENST00000494083 IGLV8-61A0A075B6I0 122 aa1.65□□□□□ -2.15
CDC42EP3-205ENST00000494083 IGHV1OR15-1A0A075B7D0 117 aa1.65□□□□□ -2.15
CDC42EP3-205ENST00000494083 A0A0J9YXV3 536 aa1.65□□□□□ -2.15
CDC42EP3-205ENST00000494083 SYNJ2BPP57105 145 aa1.65□□□□□ -2.15
CDC42EP3-205ENST00000494083 CNEP1R1Q8N9A8 125 aa1.65□□□□□ -2.15
CDC42EP3-205ENST00000494083 CDC42SE2Q9NRR3 84 aa1.65□□□□□ -2.15
CDC42EP3-205ENST00000494083 LINC00588Q9Y4M8 146 aa1.65□□□□□ -2.15
CDC42EP3-205ENST00000494083 ICE1Q9Y2F5 2266 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms