RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 A0A1W2PNN7 141 aa10.11□□□□□ -0.79
SATB1-217ENST00000493952 PRSS2P07478 247 aa10.11□□□□□ -0.79
SATB1-217ENST00000493952 PDZD11Q5EBL8 140 aa10.11□□□□□ -0.79
SATB1-217ENST00000493952 Q6ZRP5 223 aa10.11□□□□□ -0.79
SATB1-217ENST00000493952 SMIM1B2RUZ4 78 aa10.1□□□□□ -0.79
SATB1-217ENST00000493952 TRGC2P03986 189 aa10.09□□□□□ -0.79
SATB1-217ENST00000493952 NDUFA6P56556 154 aa10.09□□□□□ -0.79
SATB1-217ENST00000493952 CKS1BP61024 79 aa10.09□□□□□ -0.79
SATB1-217ENST00000493952 C9orf116Q5BN46 136 aaPredicted RBP10.09□□□□□ -0.79
SATB1-217ENST00000493952 C6orf226Q5I0X4 101 aa10.09□□□□□ -0.79
SATB1-217ENST00000493952 IGLC3P0DOY3 106 aa10.08□□□□□ -0.8
SATB1-217ENST00000493952 GAGE2EQ4V326 116 aa10.08□□□□□ -0.8
SATB1-217ENST00000493952 CHCHD1Q96BP2 118 aaKnown RBP10.08□□□□□ -0.8
SATB1-217ENST00000493952 GAGE2DQ9UEU5 116 aa10.08□□□□□ -0.8
SATB1-217ENST00000493952 NDUFC2-KCTD14E9PQ53 114 aa10.07□□□□□ -0.8
SATB1-217ENST00000493952 ATP5LO75964 103 aa10.07□□□□□ -0.8
SATB1-217ENST00000493952 SPINK8P0C7L1 97 aa10.07□□□□□ -0.8
SATB1-217ENST00000493952 PRR3P79522 188 aaKnown RBP10.07□□□□□ -0.8
SATB1-217ENST00000493952 LRP1Q07954 4544 aaKnown RBP10.07□□□□□ -0.8
SATB1-217ENST00000493952 FAM168BA1KXE4 195 aa10.06□□□□□ -0.8
SATB1-217ENST00000493952 KRTAP29-1A8MX34 341 aaPredicted RBP10.06□□□□□ -0.8
SATB1-217ENST00000493952 COX7B2Q8TF08 81 aa10.06□□□□□ -0.8
SATB1-217ENST00000493952 COLCA2A8K830 154 aa10.05□□□□□ -0.8
SATB1-217ENST00000493952 F8VRH5 84 aa10.05□□□□□ -0.8
SATB1-217ENST00000493952 BAGE3Q86Y29 109 aa10.05□□□□□ -0.8
SATB1-217ENST00000493952 H3BRM9 83 aa10.04□□□□□ -0.8
SATB1-217ENST00000493952 CXCL5P42830 114 aa10.04□□□□□ -0.8
SATB1-217ENST00000493952 FAT3Q8TDW7 4589 aa10.04□□□□□ -0.8
SATB1-217ENST00000493952 J3QL48 77 aa10.03□□□□□ -0.8
SATB1-217ENST00000493952 HSBP1O75506 76 aa10.03□□□□□ -0.8
SATB1-217ENST00000493952 ZNF22P17026 224 aaPredicted RBP10.03□□□□□ -0.8
SATB1-217ENST00000493952 C9orf129Q5T035 196 aaKnown RBP10.03□□□□□ -0.8
SATB1-217ENST00000493952 PHF5AQ7RTV0 110 aaKnown RBP10.03□□□□□ -0.8
SATB1-217ENST00000493952 C11orf86A6NJI1 115 aa10.02□□□□□ -0.81
SATB1-217ENST00000493952 LINC00310P59036 64 aa10.02□□□□□ -0.81
SATB1-217ENST00000493952 FAM19A5Q7Z5A7 132 aaPredicted RBP10.02□□□□□ -0.81
SATB1-217ENST00000493952 KRTAP7-1Q8IUC3 87 aa10.02□□□□□ -0.81
SATB1-217ENST00000493952 FAM19A2Q8N3H0 131 aa10.02□□□□□ -0.81
SATB1-217ENST00000493952 SCO1O75880 301 aa10.01□□□□□ -0.81
SATB1-217ENST00000493952 IFI27L1Q96BM0 104 aa10.01□□□□□ -0.81
SATB1-217ENST00000493952 IGLV5-39A0A0G2JS06 123 aa10□□□□□ -0.81
SATB1-217ENST00000493952 SERF1AO75920 110 aa10□□□□□ -0.81
SATB1-217ENST00000493952 OXTP01178 125 aa10□□□□□ -0.81
SATB1-217ENST00000493952 CHTOPQ9Y3Y2 248 aaKnown RBP10□□□□□ -0.81
SATB1-217ENST00000493952 TRAV12-1A0A0B4J245 112 aa9.99□□□□□ -0.81
SATB1-217ENST00000493952 XAGE1AQ9HD64 81 aa9.99□□□□□ -0.81
SATB1-217ENST00000493952 PSORS1C2Q9UIG4 136 aa9.99□□□□□ -0.81
SATB1-217ENST00000493952 HERC1Q15751 4861 aa9.98□□□□□ -0.81
SATB1-217ENST00000493952 M0QXV9 152 aa9.97□□□□□ -0.81
SATB1-217ENST00000493952 TMEM170BQ5T4T1 132 aa9.97□□□□□ -0.81
SATB1-217ENST00000493952 KRTAP11-1Q8IUC1 163 aa9.97□□□□□ -0.81
SATB1-217ENST00000493952 NUPR1O60356 82 aa9.96□□□□□ -0.82
SATB1-217ENST00000493952 SERTAD4-AS1Q5TG53 156 aa9.96□□□□□ -0.82
SATB1-217ENST00000493952 LEPROTL1O95214 131 aa9.95□□□□□ -0.82
SATB1-217ENST00000493952 SRSF9Q13242 221 aaKnown RBP eCLIP9.94□□□□□ -0.82
SATB1-217ENST00000493952 C1orf137Q5JT78 98 aa9.94□□□□□ -0.82
SATB1-217ENST00000493952 SPINK6Q6UWN8 80 aa9.93□□□□□ -0.82
SATB1-217ENST00000493952 TMEM223A0PJW6 202 aa9.92□□□□□ -0.82
SATB1-217ENST00000493952 H0Y8G0 127 aa9.92□□□□□ -0.82
SATB1-217ENST00000493952 ODF1Q14990 250 aa9.92□□□□□ -0.82
SATB1-217ENST00000493952 HIST1H2BKO60814 126 aa9.91□□□□□ -0.82
SATB1-217ENST00000493952 HIST1H2BJP06899 126 aa9.91□□□□□ -0.82
SATB1-217ENST00000493952 HIST1H2BOP23527 126 aa9.91□□□□□ -0.82
SATB1-217ENST00000493952 HIST1H2BBP33778 126 aa9.91□□□□□ -0.82
SATB1-217ENST00000493952 HIST1H2BDP58876 126 aa9.91□□□□□ -0.82
SATB1-217ENST00000493952 HIST1H2BCP62807 126 aa9.91□□□□□ -0.82
SATB1-217ENST00000493952 UBE2BP63146 152 aa9.91□□□□□ -0.82
SATB1-217ENST00000493952 HIST2H2BEQ16778 126 aa9.91□□□□□ -0.82
SATB1-217ENST00000493952 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.91□□□□□ -0.82
SATB1-217ENST00000493952 HIST1H2BHQ93079 126 aa9.91□□□□□ -0.82
SATB1-217ENST00000493952 HIST1H2BNQ99877 126 aa9.91□□□□□ -0.82
SATB1-217ENST00000493952 HIST1H2BMQ99879 126 aa9.91□□□□□ -0.82
SATB1-217ENST00000493952 MT1HL1P0DM35 61 aa9.9□□□□□ -0.82
SATB1-217ENST00000493952 FABP4P15090 132 aa9.9□□□□□ -0.82
SATB1-217ENST00000493952 PFN2P35080 140 aa9.9□□□□□ -0.82
SATB1-217ENST00000493952 ZNF625Q96I27 306 aaPredicted RBP9.9□□□□□ -0.82
SATB1-217ENST00000493952 C22orf24Q9Y442 160 aa9.9□□□□□ -0.82
SATB1-217ENST00000493952 HSPB8Q9UJY1 196 aa9.89□□□□□ -0.83
SATB1-217ENST00000493952 ERG28Q9UKR5 140 aa9.89□□□□□ -0.83
SATB1-217ENST00000493952 IGLV7-43P04211 117 aa9.88□□□□□ -0.83
SATB1-217ENST00000493952 SFTA2Q6UW10 78 aa9.87□□□□□ -0.83
SATB1-217ENST00000493952 TP73-AS1Q9UF72 201 aa9.87□□□□□ -0.83
SATB1-217ENST00000493952 PLA2G2DQ9UNK4 145 aa9.87□□□□□ -0.83
SATB1-217ENST00000493952 COX17Q14061 63 aa9.86□□□□□ -0.83
SATB1-217ENST00000493952 REG3GQ6UW15 175 aa9.86□□□□□ -0.83
SATB1-217ENST00000493952 MRPL55Q7Z7F7 128 aaKnown RBP9.86□□□□□ -0.83
SATB1-217ENST00000493952 LINC01600Q96MT4 127 aa9.86□□□□□ -0.83
SATB1-217ENST00000493952 LBHQ53QV2 105 aaPredicted RBP9.85□□□□□ -0.83
SATB1-217ENST00000493952 PMCHL2Q9BQD1 86 aa9.85□□□□□ -0.83
SATB1-217ENST00000493952 SND1-IT1Q9HBX3 110 aa9.85□□□□□ -0.83
SATB1-217ENST00000493952 IGLV5-37A0A075B6J1 123 aa9.84□□□□□ -0.83
SATB1-217ENST00000493952 PLNP26678 52 aa9.84□□□□□ -0.83
SATB1-217ENST00000493952 LINC00167Q96N53 147 aa9.83□□□□□ -0.84
SATB1-217ENST00000493952 MAP1LC3CQ9BXW4 147 aa9.83□□□□□ -0.84
SATB1-217ENST00000493952 TNXBP22105 4242 aa9.82□□□□□ -0.84
SATB1-217ENST00000493952 DPM2O94777 84 aa9.82□□□□□ -0.84
SATB1-217ENST00000493952 NKAPP1Q8N9T2 125 aa9.82□□□□□ -0.84
SATB1-217ENST00000493952 A0A0U1RRA0 63 aa9.81□□□□□ -0.84
SATB1-217ENST00000493952 GAGE10A6NGK3 116 aa9.81□□□□□ -0.84
SATB1-217ENST00000493952 RPL37AP8A6NKH3 93 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms