RNA–Protein interactions for RNA: ENST00000493511.1

GTF3C2-212, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-212ENST00000493511 CST9LQ9H4G1 147 aa11.27□□□□□ -0.61
GTF3C2-212ENST00000493511 TINCRA0A1B0GVN0 87 aa11.26□□□□□ -0.61
GTF3C2-212ENST00000493511 PMVKQ15126 192 aa11.26□□□□□ -0.61
GTF3C2-212ENST00000493511 C9orf116Q5BN46 136 aaPredicted RBP11.26□□□□□ -0.61
GTF3C2-212ENST00000493511 Q6ZRP5 223 aa11.26□□□□□ -0.61
GTF3C2-212ENST00000493511 A0A1W2PNN7 141 aa11.25□□□□□ -0.61
GTF3C2-212ENST00000493511 YPEL4Q96NS1 127 aa11.25□□□□□ -0.61
GTF3C2-212ENST00000493511 NDUFC2-KCTD14E9PQ53 114 aa11.24□□□□□ -0.61
GTF3C2-212ENST00000493511 HBDP02042 147 aa11.24□□□□□ -0.61
GTF3C2-212ENST00000493511 GAGE2EQ4V326 116 aa11.23□□□□□ -0.61
GTF3C2-212ENST00000493511 URB1-AS1Q96HZ7 61 aa11.23□□□□□ -0.61
GTF3C2-212ENST00000493511 GAGE2DQ9UEU5 116 aa11.23□□□□□ -0.61
GTF3C2-212ENST00000493511 IGLV5-45A0A087WSX0 123 aa11.22□□□□□ -0.61
GTF3C2-212ENST00000493511 A0A096LNJ9 63 aa11.22□□□□□ -0.61
GTF3C2-212ENST00000493511 CXCL5P42830 114 aa11.21□□□□□ -0.61
GTF3C2-212ENST00000493511 PDZD11Q5EBL8 140 aa11.21□□□□□ -0.61
GTF3C2-212ENST00000493511 SMIM1B2RUZ4 78 aa11.2□□□□□ -0.62
GTF3C2-212ENST00000493511 F8VRH5 84 aa11.2□□□□□ -0.62
GTF3C2-212ENST00000493511 H3BRM9 83 aa11.2□□□□□ -0.62
GTF3C2-212ENST00000493511 NDUFA6P56556 154 aa11.2□□□□□ -0.62
GTF3C2-212ENST00000493511 CBLN2Q8IUK8 224 aa11.2□□□□□ -0.62
GTF3C2-212ENST00000493511 ATP5LO75964 103 aa11.19□□□□□ -0.62
GTF3C2-212ENST00000493511 PMCHL1Q16048 86 aa11.19□□□□□ -0.62
GTF3C2-212ENST00000493511 SLC7A5P1Q8MH63 180 aa11.18□□□□□ -0.62
GTF3C2-212ENST00000493511 COX7B2Q8TF08 81 aa11.18□□□□□ -0.62
GTF3C2-212ENST00000493511 FAM168BA1KXE4 195 aa11.17□□□□□ -0.62
GTF3C2-212ENST00000493511 IGLC3P0DOY3 106 aa11.17□□□□□ -0.62
GTF3C2-212ENST00000493511 PHF5AQ7RTV0 110 aaKnown RBP11.17□□□□□ -0.62
GTF3C2-212ENST00000493511 FAM19A5Q7Z5A7 132 aaPredicted RBP11.17□□□□□ -0.62
GTF3C2-212ENST00000493511 CHCHD1Q96BP2 118 aaKnown RBP11.17□□□□□ -0.62
GTF3C2-212ENST00000493511 SPINK8P0C7L1 97 aa11.16□□□□□ -0.62
GTF3C2-212ENST00000493511 SPINK6Q6UWN8 80 aa11.15□□□□□ -0.62
GTF3C2-212ENST00000493511 PSORS1C2Q9UIG4 136 aa11.15□□□□□ -0.62
GTF3C2-212ENST00000493511 C9orf129Q5T035 196 aaKnown RBP11.14□□□□□ -0.63
GTF3C2-212ENST00000493511 M0QXV9 152 aa11.13□□□□□ -0.63
GTF3C2-212ENST00000493511 BAGE3Q86Y29 109 aa11.13□□□□□ -0.63
GTF3C2-212ENST00000493511 TRGC2P03986 189 aa11.11□□□□□ -0.63
GTF3C2-212ENST00000493511 ZNF22P17026 224 aaPredicted RBP11.11□□□□□ -0.63
GTF3C2-212ENST00000493511 SRSF9Q13242 221 aaKnown RBP eCLIP11.11□□□□□ -0.63
GTF3C2-212ENST00000493511 C1orf137Q5JT78 98 aa11.11□□□□□ -0.63
GTF3C2-212ENST00000493511 IGLV5-39A0A0G2JS06 123 aa11.1□□□□□ -0.63
GTF3C2-212ENST00000493511 HSBP1O75506 76 aa11.1□□□□□ -0.63
GTF3C2-212ENST00000493511 UBE2BP63146 152 aa11.1□□□□□ -0.63
GTF3C2-212ENST00000493511 REG3GQ6UW15 175 aa11.1□□□□□ -0.63
GTF3C2-212ENST00000493511 XAGE1AQ9HD64 81 aa11.1□□□□□ -0.63
GTF3C2-212ENST00000493511 SERTAD4-AS1Q5TG53 156 aa11.09□□□□□ -0.63
GTF3C2-212ENST00000493511 KRTAP7-1Q8IUC3 87 aa11.09□□□□□ -0.63
GTF3C2-212ENST00000493511 CHTOPQ9Y3Y2 248 aaKnown RBP11.09□□□□□ -0.63
GTF3C2-212ENST00000493511 C11orf86A6NJI1 115 aa11.08□□□□□ -0.64
GTF3C2-212ENST00000493511 TMEM170BQ5T4T1 132 aa11.08□□□□□ -0.64
GTF3C2-212ENST00000493511 IFI27L1Q96BM0 104 aa11.08□□□□□ -0.64
GTF3C2-212ENST00000493511 TRAV12-1A0A0B4J245 112 aa11.07□□□□□ -0.64
GTF3C2-212ENST00000493511 MT1HL1P0DM35 61 aa11.07□□□□□ -0.64
GTF3C2-212ENST00000493511 TNXBP22105 4242 aa11.07□□□□□ -0.64
GTF3C2-212ENST00000493511 ODF1Q14990 250 aa11.06□□□□□ -0.64
GTF3C2-212ENST00000493511 LINC01600Q96MT4 127 aa11.06□□□□□ -0.64
GTF3C2-212ENST00000493511 LBHQ53QV2 105 aaPredicted RBP11.05□□□□□ -0.64
GTF3C2-212ENST00000493511 SFTA2Q6UW10 78 aa11.05□□□□□ -0.64
GTF3C2-212ENST00000493511 FAM19A2Q8N3H0 131 aa11.05□□□□□ -0.64
GTF3C2-212ENST00000493511 HMCN2Q8NDA2 5059 aa11.05□□□□□ -0.64
GTF3C2-212ENST00000493511 COLCA2A8K830 154 aa11.04□□□□□ -0.64
GTF3C2-212ENST00000493511 IGLV7-43P04211 117 aa11.04□□□□□ -0.64
GTF3C2-212ENST00000493511 KRTAP11-1Q8IUC1 163 aa11.04□□□□□ -0.64
GTF3C2-212ENST00000493511 TP73-AS1Q9UF72 201 aa11.04□□□□□ -0.64
GTF3C2-212ENST00000493511 C22orf24Q9Y442 160 aa11.04□□□□□ -0.64
GTF3C2-212ENST00000493511 SERF1AO75920 110 aa11.02□□□□□ -0.65
GTF3C2-212ENST00000493511 DIRC1Q969H9 104 aa11.02□□□□□ -0.65
GTF3C2-212ENST00000493511 PFN2P35080 140 aa11.01□□□□□ -0.65
GTF3C2-212ENST00000493511 COX17Q14061 63 aa11.01□□□□□ -0.65
GTF3C2-212ENST00000493511 MRPL55Q7Z7F7 128 aaKnown RBP11.01□□□□□ -0.65
GTF3C2-212ENST00000493511 PLA2G2DQ9UNK4 145 aa11.01□□□□□ -0.65
GTF3C2-212ENST00000493511 LEPROTL1O95214 131 aa11□□□□□ -0.65
GTF3C2-212ENST00000493511 ERG28Q9UKR5 140 aa11□□□□□ -0.65
GTF3C2-212ENST00000493511 TMEM223A0PJW6 202 aa10.99□□□□□ -0.65
GTF3C2-212ENST00000493511 NUPR1O60356 82 aa10.98□□□□□ -0.65
GTF3C2-212ENST00000493511 LINC00310P59036 64 aa10.98□□□□□ -0.65
GTF3C2-212ENST00000493511 HSPB8Q9UJY1 196 aa10.98□□□□□ -0.65
GTF3C2-212ENST00000493511 H0Y8G0 127 aa10.97□□□□□ -0.65
GTF3C2-212ENST00000493511 NKAPP1Q8N9T2 125 aa10.97□□□□□ -0.65
GTF3C2-212ENST00000493511 ZNF625Q96I27 306 aaPredicted RBP10.97□□□□□ -0.65
GTF3C2-212ENST00000493511 IGLV5-37A0A075B6J1 123 aa10.96□□□□□ -0.65
GTF3C2-212ENST00000493511 H0Y9J4 135 aa10.96□□□□□ -0.65
GTF3C2-212ENST00000493511 KRTAP10-8P60410 259 aa10.94□□□□□ -0.66
GTF3C2-212ENST00000493511 LINC00167Q96N53 147 aa10.94□□□□□ -0.66
GTF3C2-212ENST00000493511 SND1-IT1Q9HBX3 110 aa10.94□□□□□ -0.66
GTF3C2-212ENST00000493511 FABP4P15090 132 aa10.93□□□□□ -0.66
GTF3C2-212ENST00000493511 PLNP26678 52 aa10.93□□□□□ -0.66
GTF3C2-212ENST00000493511 GAGE10A6NGK3 116 aa10.92□□□□□ -0.66
GTF3C2-212ENST00000493511 RPL37AP8A6NKH3 93 aa10.92□□□□□ -0.66
GTF3C2-212ENST00000493511 ZNF861PO60384 105 aa10.92□□□□□ -0.66
GTF3C2-212ENST00000493511 SCO1O75880 301 aa10.92□□□□□ -0.66
GTF3C2-212ENST00000493511 RPL24P83731 157 aaKnown RBP10.92□□□□□ -0.66
GTF3C2-212ENST00000493511 LINC00158P58513 81 aa10.91□□□□□ -0.66
GTF3C2-212ENST00000493511 BCE1O60756 84 aa10.9□□□□□ -0.66
GTF3C2-212ENST00000493511 HERV-K104P63124 156 aa10.9□□□□□ -0.66
GTF3C2-212ENST00000493511 HIST1H2BKO60814 126 aa10.89□□□□□ -0.67
GTF3C2-212ENST00000493511 ATP6V1G1O75348 118 aa10.89□□□□□ -0.67
GTF3C2-212ENST00000493511 DPM2O94777 84 aa10.89□□□□□ -0.67
GTF3C2-212ENST00000493511 HIST1H2BJP06899 126 aa10.89□□□□□ -0.67
GTF3C2-212ENST00000493511 HIST1H2BOP23527 126 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms