RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 LEPROTO15243 131 aa8.78□□□□□ -1
MSH6-208ENST00000493177 PLEKHB2Q96CS7 222 aa8.78□□□□□ -1
MSH6-208ENST00000493177 E9PLD3 99 aa8.77□□□□□ -1.01
MSH6-208ENST00000493177 CKS1BP61024 79 aa8.77□□□□□ -1.01
MSH6-208ENST00000493177 MAJINQ3KP22 176 aa8.77□□□□□ -1.01
MSH6-208ENST00000493177 Q8IZM0 81 aa8.77□□□□□ -1.01
MSH6-208ENST00000493177 CAMK2N2Q96S95 79 aa8.77□□□□□ -1.01
MSH6-208ENST00000493177 LGALS3P17931 250 aaKnown RBP8.76□□□□□ -1.01
MSH6-208ENST00000493177 KIAA0087Q14695 138 aa8.76□□□□□ -1.01
MSH6-208ENST00000493177 ANKRD39Q53RE8 183 aa8.76□□□□□ -1.01
MSH6-208ENST00000493177 Q8N1X5 172 aa8.76□□□□□ -1.01
MSH6-208ENST00000493177 KRTAP17-1Q9BYP8 105 aa8.76□□□□□ -1.01
MSH6-208ENST00000493177 RYR1P21817 5038 aa8.76□□□□□ -1.01
MSH6-208ENST00000493177 J3QQQ9 107 aa8.75□□□□□ -1.01
MSH6-208ENST00000493177 NDUFA1O15239 70 aa8.75□□□□□ -1.01
MSH6-208ENST00000493177 NMUP48645 174 aa8.75□□□□□ -1.01
MSH6-208ENST00000493177 KRTAP10-1P60331 282 aa8.75□□□□□ -1.01
MSH6-208ENST00000493177 C2orf48Q96LS8 159 aa8.75□□□□□ -1.01
MSH6-208ENST00000493177 VAMP8Q9BV40 100 aa8.75□□□□□ -1.01
MSH6-208ENST00000493177 CXCL5P42830 114 aa8.74□□□□□ -1.01
MSH6-208ENST00000493177 TSPEAR-AS2P59090 65 aa8.74□□□□□ -1.01
MSH6-208ENST00000493177 SYCNQ0VAF6 134 aa8.74□□□□□ -1.01
MSH6-208ENST00000493177 C2orf82Q6UX34 121 aa8.74□□□□□ -1.01
MSH6-208ENST00000493177 PAM16Q9Y3D7 125 aa8.74□□□□□ -1.01
MSH6-208ENST00000493177 IGKV2D-26A0A0A0MRZ7 120 aa8.73□□□□□ -1.01
MSH6-208ENST00000493177 EPM2AB3EWF7 344 aa8.73□□□□□ -1.01
MSH6-208ENST00000493177 UNQ6190/PRO20217Q6UXQ8 127 aa8.73□□□□□ -1.01
MSH6-208ENST00000493177 CARD19Q96LW7 228 aa8.73□□□□□ -1.01
MSH6-208ENST00000493177 NDUFA12Q9UI09 145 aa8.73□□□□□ -1.01
MSH6-208ENST00000493177 LRP1BQ9NZR2 4599 aa8.73□□□□□ -1.01
MSH6-208ENST00000493177 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.72□□□□□ -1.01
MSH6-208ENST00000493177 F8WDY8 70 aa8.72□□□□□ -1.01
MSH6-208ENST00000493177 SPATA45Q537H7 98 aa8.72□□□□□ -1.01
MSH6-208ENST00000493177 Q6ZRU5 148 aa8.72□□□□□ -1.01
MSH6-208ENST00000493177 KRTAP4-5Q9BYR2 181 aa8.72□□□□□ -1.01
MSH6-208ENST00000493177 MYMXA0A1B0GTQ4 84 aa8.71□□□□□ -1.02
MSH6-208ENST00000493177 SLPIP03973 132 aa8.71□□□□□ -1.02
MSH6-208ENST00000493177 S100A12P80511 92 aa8.71□□□□□ -1.02
MSH6-208ENST00000493177 C10orf25Q5T742 122 aa8.71□□□□□ -1.02
MSH6-208ENST00000493177 ZNF625Q96I27 306 aaPredicted RBP8.71□□□□□ -1.02
MSH6-208ENST00000493177 DNAH5Q8TE73 4624 aa8.71□□□□□ -1.02
MSH6-208ENST00000493177 ZNF815PA8K554 130 aa8.7□□□□□ -1.02
MSH6-208ENST00000493177 SMIM6P0DI80 62 aa8.7□□□□□ -1.02
MSH6-208ENST00000493177 XGP55808 180 aa8.7□□□□□ -1.02
MSH6-208ENST00000493177 CNBPP62633 177 aaKnown RBP8.7□□□□□ -1.02
MSH6-208ENST00000493177 HAMPP81172 84 aa8.7□□□□□ -1.02
MSH6-208ENST00000493177 SFTA2Q6UW10 78 aa8.7□□□□□ -1.02
MSH6-208ENST00000493177 TTTY13Q9BZ97 58 aa8.7□□□□□ -1.02
MSH6-208ENST00000493177 C6orf48Q9UBA6 75 aa8.69□□□□□ -1.02
MSH6-208ENST00000493177 HSPG2P98160 4391 aa8.68□□□□□ -1.02
MSH6-208ENST00000493177 TRBV30A0A0K0K1B3 111 aa8.68□□□□□ -1.02
MSH6-208ENST00000493177 SMR3BP02814 79 aaPredicted RBP8.68□□□□□ -1.02
MSH6-208ENST00000493177 HERV-K104P63124 156 aa8.68□□□□□ -1.02
MSH6-208ENST00000493177 MEIG1Q5JSS6 88 aa8.68□□□□□ -1.02
MSH6-208ENST00000493177 PCP2Q8IVA1 136 aa8.68□□□□□ -1.02
MSH6-208ENST00000493177 C9orf116Q5BN46 136 aaPredicted RBP8.67□□□□□ -1.02
MSH6-208ENST00000493177 Q5VSD8 79 aa8.67□□□□□ -1.02
MSH6-208ENST00000493177 PCLOQ9Y6V0 5065 aa8.67□□□□□ -1.02
MSH6-208ENST00000493177 FAM229AH3BQW9 127 aa8.66□□□□□ -1.02
MSH6-208ENST00000493177 PFN2P35080 140 aa8.66□□□□□ -1.02
MSH6-208ENST00000493177 RNF151Q2KHN1 245 aa8.66□□□□□ -1.02
MSH6-208ENST00000493177 LINC01620Q4KN68 170 aa8.66□□□□□ -1.02
MSH6-208ENST00000493177 SCGB1D4Q6XE38 83 aa8.66□□□□□ -1.02
MSH6-208ENST00000493177 C14orf144Q96I85 54 aa8.66□□□□□ -1.02
MSH6-208ENST00000493177 ERG28Q9UKR5 140 aa8.66□□□□□ -1.02
MSH6-208ENST00000493177 APOBP04114 4563 aaKnown RBP8.66□□□□□ -1.02
MSH6-208ENST00000493177 A0A0U1RRA0 63 aa8.65□□□□□ -1.02
MSH6-208ENST00000493177 COX8AP10176 69 aa8.65□□□□□ -1.02
MSH6-208ENST00000493177 RPL18AQ02543 176 aaKnown RBP8.65□□□□□ -1.02
MSH6-208ENST00000493177 C9orf163Q8N9P6 203 aa8.65□□□□□ -1.02
MSH6-208ENST00000493177 A0A0J9YXY3 114 aa8.64□□□□□ -1.03
MSH6-208ENST00000493177 LINC00587B1AMM8 73 aa8.64□□□□□ -1.03
MSH6-208ENST00000493177 SMIM13P0DJ93 91 aa8.64□□□□□ -1.03
MSH6-208ENST00000493177 LINC00158P58513 81 aa8.64□□□□□ -1.03
MSH6-208ENST00000493177 C12orf57Q99622 126 aa8.64□□□□□ -1.03
MSH6-208ENST00000493177 PKIGQ9Y2B9 76 aa8.64□□□□□ -1.03
MSH6-208ENST00000493177 LOC107984640A0A0U1RRK4 108 aa8.63□□□□□ -1.03
MSH6-208ENST00000493177 GAGE2BQ13066 116 aa8.63□□□□□ -1.03
MSH6-208ENST00000493177 CIRBPQ14011 172 aaKnown RBP8.63□□□□□ -1.03
MSH6-208ENST00000493177 FAM30AQ9NZY2 134 aa8.63□□□□□ -1.03
MSH6-208ENST00000493177 INAFM2P0DMQ5 153 aa8.62□□□□□ -1.03
MSH6-208ENST00000493177 GAGE2EQ4V326 116 aa8.62□□□□□ -1.03
MSH6-208ENST00000493177 SLC25A34Q6PIV7 304 aa8.62□□□□□ -1.03
MSH6-208ENST00000493177 BOD1L2Q8IYS8 172 aa8.62□□□□□ -1.03
MSH6-208ENST00000493177 GAGE2DQ9UEU5 116 aa8.62□□□□□ -1.03
MSH6-208ENST00000493177 NDUFC2-KCTD14E9PQ53 114 aa8.61□□□□□ -1.03
MSH6-208ENST00000493177 TLX1NBP0CAT3 122 aa8.61□□□□□ -1.03
MSH6-208ENST00000493177 COX17Q14061 63 aa8.61□□□□□ -1.03
MSH6-208ENST00000493177 TP73-AS1Q9UF72 201 aa8.61□□□□□ -1.03
MSH6-208ENST00000493177 IGKV2-24A0A0C4DH68 120 aa8.6□□□□□ -1.03
MSH6-208ENST00000493177 DLEU1O43261 78 aa8.6□□□□□ -1.03
MSH6-208ENST00000493177 Q6ZRP5 223 aa8.6□□□□□ -1.03
MSH6-208ENST00000493177 LINC00518Q8N0U6 118 aa8.6□□□□□ -1.03
MSH6-208ENST00000493177 PRO1933Q9H354 126 aa8.6□□□□□ -1.03
MSH6-208ENST00000493177 ABCA13Q86UQ4 5058 aa8.59□□□□□ -1.03
MSH6-208ENST00000493177 SDIM1Q6ZPB5 146 aa8.59□□□□□ -1.03
MSH6-208ENST00000493177 MIR7-3HGQ8N6C7 128 aa8.59□□□□□ -1.03
MSH6-208ENST00000493177 DAND5Q8N907 189 aa8.59□□□□□ -1.03
MSH6-208ENST00000493177 A0A096LNI7 61 aa8.58□□□□□ -1.04
MSH6-208ENST00000493177 TMEM238C9JI98 176 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms