RNA–Protein interactions for RNA: ENST00000492882.1

USP34-220, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 2

Gene USP34, Length 348 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-220ENST00000492882 HLA-DRB4X5D2U9 266 aa-0.35□□□□□ -2.47
USP34-220ENST00000492882 SPEGQ15772 3267 aa-0.35□□□□□ -2.47
USP34-220ENST00000492882 MAPKBP1O60336 1514 aa-0.35□□□□□ -2.47
USP34-220ENST00000492882 HMGXB3Q12766 1538 aa-0.35□□□□□ -2.47
USP34-220ENST00000492882 CSMD2Q7Z408 3487 aa-0.35□□□□□ -2.47
USP34-220ENST00000492882 CAMSAP1Q5T5Y3 1602 aa-0.35□□□□□ -2.47
USP34-220ENST00000492882 CICQ96RK0 1608 aaPredicted RBP-0.35□□□□□ -2.47
USP34-220ENST00000492882 ALKQ9UM73 1620 aa-0.35□□□□□ -2.47
USP34-220ENST00000492882 SPENQ96T58 3664 aaKnown RBP-0.35□□□□□ -2.47
USP34-220ENST00000492882 NKTRP30414 1462 aaKnown RBP-0.35□□□□□ -2.47
USP34-220ENST00000492882 IFT140Q96RY7 1462 aa-0.35□□□□□ -2.47
USP34-220ENST00000492882 LRRC37AA6NMS7 1700 aa-0.35□□□□□ -2.47
USP34-220ENST00000492882 PATJQ8NI35 1801 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 OVOS2A0A0G2JMS6 1433 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 PRG4Q92954 1404 aaPredicted RBP-0.36□□□□□ -2.47
USP34-220ENST00000492882 COL14A1Q05707 1796 aaKnown RBP-0.36□□□□□ -2.47
USP34-220ENST00000492882 BCORQ6W2J9 1755 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 LINC00959A0A1B0GUT2 108 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 A0A1B0GWA3 101 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 J3QR89 54 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 MT2AP02795 61 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 DBIP07108 87 aaKnown RBP-0.36□□□□□ -2.47
USP34-220ENST00000492882 TNP1P09430 55 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 SPART-AS1P0CW21 52 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 SAA2P0DJI9 122 aaPredicted RBP-0.36□□□□□ -2.47
USP34-220ENST00000492882 MT1GP13640 62 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 RPS29P62273 56 aaKnown RBP-0.36□□□□□ -2.47
USP34-220ENST00000492882 LSM6P62312 80 aaKnown RBP-0.36□□□□□ -2.47
USP34-220ENST00000492882 GNG3P63215 75 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 PRLHP81277 87 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 HIST1H1AQ02539 215 aaPredicted RBP-0.36□□□□□ -2.47
USP34-220ENST00000492882 SAMD13Q5VXD3 122 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 C10orf113Q5VZT2 155 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 TRIQKQ629K1 86 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 TOMM20LQ6UXN7 152 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 COX6B2Q6YFQ2 88 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 COMMD6Q7Z4G1 85 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 C5orf38Q86SI9 138 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 MT1MQ8N339 61 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 THEM6Q8WUY1 208 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 ARL11Q969Q4 196 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 SNRNP25Q9BV90 132 aaKnown RBP-0.36□□□□□ -2.47
USP34-220ENST00000492882 SS18L2Q9UHA2 77 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 TRAPPC2LQ9UL33 140 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 LINC01558Q9Y6Z2 57 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 ARHGEF10O15013 1369 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 ANKRD30AQ9BXX3 1397 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 XRN1Q8IZH2 1706 aaKnown RBP-0.36□□□□□ -2.47
USP34-220ENST00000492882 FMN2Q9NZ56 1722 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 CEP250Q9BV73 2442 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 ZNF518AQ6AHZ1 1483 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 PLB1Q6P1J6 1458 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 DOCK2Q92608 1830 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 SYNMO15061 1565 aa-0.36□□□□□ -2.47
USP34-220ENST00000492882 RIMS1Q86UR5 1692 aaKnown RBP-0.37□□□□□ -2.47
USP34-220ENST00000492882 SMG6Q86US8 1419 aaKnown RBP-0.37□□□□□ -2.47
USP34-220ENST00000492882 MAP3K1Q13233 1512 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 KIAA1551Q9HCM1 1747 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 MARF1Q9Y4F3 1742 aaKnown RBP-0.37□□□□□ -2.47
USP34-220ENST00000492882 MMP24-AS1A0A0U1RRL7 71 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 A0A1B0GU69 56 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 H3BQF6 201 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 K7EP13 123 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 M0QX08 132 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 PITX3O75364 302 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 SMR3BP02814 79 aaPredicted RBP-0.37□□□□□ -2.47
USP34-220ENST00000492882 COX6CP09669 75 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 SCTP09683 121 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 C3orf79P0CE67 100 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 TRAPPC2P0DI81 140 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 TRAPPC2BP0DI82 140 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 GUCA1AP43080 201 aaPredicted RBP-0.37□□□□□ -2.47
USP34-220ENST00000492882 POLR2HP52434 150 aaKnown RBP-0.37□□□□□ -2.47
USP34-220ENST00000492882 UBE2G1P62253 170 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 TFAMQ00059 246 aaKnown RBP-0.37□□□□□ -2.47
USP34-220ENST00000492882 CCDC153Q494R4 210 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 S100A7L2Q5SY68 101 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 MRPL54Q6P161 138 aaKnown RBP-0.37□□□□□ -2.47
USP34-220ENST00000492882 KCNRGQ8N5I3 272 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 MYOZ3Q8TDC0 251 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 TCEAL4Q96EI5 215 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 TMEM191AQ9H0A3 160 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 BOLA2Q9H3K6 86 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 NXT2Q9NPJ8 142 aaKnown RBP-0.37□□□□□ -2.47
USP34-220ENST00000492882 GINS2Q9Y248 185 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 AP4S1Q9Y587 144 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 DNAJC15Q9Y5T4 150 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 SERP1Q9Y6X1 66 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 MYH7P12883 1935 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 TCHHQ07283 1943 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 EIF3AQ14152 1382 aaKnown RBP-0.37□□□□□ -2.47
USP34-220ENST00000492882 ERCC6Q03468 1493 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 GRIN2AQ12879 1464 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 ARHGEF5Q12774 1597 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 DOCK1Q14185 1865 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 SPTBN5Q9NRC6 3674 aaKnown RBP-0.37□□□□□ -2.47
USP34-220ENST00000492882 DNAH5Q8TE73 4624 aa-0.37□□□□□ -2.47
USP34-220ENST00000492882 OVOS2A0A0J9YW53 1432 aa-0.38□□□□□ -2.47
USP34-220ENST00000492882 DISP2A7MBM2 1401 aa-0.38□□□□□ -2.47
USP34-220ENST00000492882 OVOS2Q6IE36 1432 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms