RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 TSTD3H0UI37 97 aa14.48□□□□□ -0.09
PSPC1-204ENST00000492741 SFTA2Q6UW10 78 aa14.48□□□□□ -0.09
PSPC1-204ENST00000492741 SCGB1D4Q6XE38 83 aa14.48□□□□□ -0.09
PSPC1-204ENST00000492741 TP73-AS1Q9UF72 201 aa14.48□□□□□ -0.09
PSPC1-204ENST00000492741 DNAH6Q9C0G6 4158 aa14.48□□□□□ -0.09
PSPC1-204ENST00000492741 C2orf48Q96LS8 159 aa14.47□□□□□ -0.09
PSPC1-204ENST00000492741 HERV-K104P63124 156 aa14.46□□□□□ -0.09
PSPC1-204ENST00000492741 UNQ6190/PRO20217Q6UXQ8 127 aa14.46□□□□□ -0.09
PSPC1-204ENST00000492741 UQCR10Q9UDW1 63 aa14.46□□□□□ -0.09
PSPC1-204ENST00000492741 DLEU1O43261 78 aa14.46□□□□□ -0.1
PSPC1-204ENST00000492741 DNAH10Q8IVF4 4471 aa14.45□□□□□ -0.1
PSPC1-204ENST00000492741 MEIG1Q5JSS6 88 aa14.44□□□□□ -0.1
PSPC1-204ENST00000492741 A0A087WTM6 91 aa14.44□□□□□ -0.1
PSPC1-204ENST00000492741 F8WDY8 70 aa14.44□□□□□ -0.1
PSPC1-204ENST00000492741 SYCNQ0VAF6 134 aa14.44□□□□□ -0.1
PSPC1-204ENST00000492741 C10orf25Q5T742 122 aa14.44□□□□□ -0.1
PSPC1-204ENST00000492741 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.43□□□□□ -0.1
PSPC1-204ENST00000492741 A0A0J9YXY3 114 aa14.43□□□□□ -0.1
PSPC1-204ENST00000492741 RTL8CO15255 209 aa14.43□□□□□ -0.1
PSPC1-204ENST00000492741 MIEN1Q9BRT3 115 aa14.43□□□□□ -0.1
PSPC1-204ENST00000492741 Q6ZRU5 148 aa14.42□□□□□ -0.1
PSPC1-204ENST00000492741 EREGO14944 169 aa14.41□□□□□ -0.1
PSPC1-204ENST00000492741 CIRBPQ14011 172 aaKnown RBP14.41□□□□□ -0.1
PSPC1-204ENST00000492741 Q8N814 137 aa14.41□□□□□ -0.1
PSPC1-204ENST00000492741 CARD19Q96LW7 228 aa14.41□□□□□ -0.1
PSPC1-204ENST00000492741 HYDINQ4G0P3 5121 aa14.41□□□□□ -0.1
PSPC1-204ENST00000492741 A0A0U1RRA0 63 aa14.4□□□□□ -0.1
PSPC1-204ENST00000492741 TNP2Q05952 138 aa14.4□□□□□ -0.1
PSPC1-204ENST00000492741 LINC00587B1AMM8 73 aa14.39□□□□□ -0.11
PSPC1-204ENST00000492741 SLPIP03973 132 aa14.39□□□□□ -0.11
PSPC1-204ENST00000492741 PFN2P35080 140 aa14.39□□□□□ -0.11
PSPC1-204ENST00000492741 C9orf116Q5BN46 136 aaPredicted RBP14.39□□□□□ -0.11
PSPC1-204ENST00000492741 C6orf48Q9UBA6 75 aa14.39□□□□□ -0.11
PSPC1-204ENST00000492741 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.38□□□□□ -0.11
PSPC1-204ENST00000492741 TRBV30A0A0K0K1B3 111 aa14.38□□□□□ -0.11
PSPC1-204ENST00000492741 ERG28Q9UKR5 140 aa14.38□□□□□ -0.11
PSPC1-204ENST00000492741 SMIM13P0DJ93 91 aa14.38□□□□□ -0.11
PSPC1-204ENST00000492741 HNRNPA3P51991 378 aaKnown RBP14.38□□□□□ -0.11
PSPC1-204ENST00000492741 LINC00158P58513 81 aa14.38□□□□□ -0.11
PSPC1-204ENST00000492741 SACSQ9NZJ4 4579 aa14.36□□□□□ -0.11
PSPC1-204ENST00000492741 TMEM238C9JI98 176 aa14.35□□□□□ -0.11
PSPC1-204ENST00000492741 C2orf91Q6ZV80 131 aa14.35□□□□□ -0.11
PSPC1-204ENST00000492741 CNBPP62633 177 aaKnown RBP14.35□□□□□ -0.11
PSPC1-204ENST00000492741 SRSF9Q13242 221 aaKnown RBP eCLIP14.34□□□□□ -0.11
PSPC1-204ENST00000492741 DNAH2Q9P225 4427 aa14.33□□□□□ -0.11
PSPC1-204ENST00000492741 TIMM17BO60830 172 aa14.33□□□□□ -0.12
PSPC1-204ENST00000492741 COX17Q14061 63 aa14.33□□□□□ -0.12
PSPC1-204ENST00000492741 HIGD1BQ9P298 99 aa14.33□□□□□ -0.12
PSPC1-204ENST00000492741 RNF151Q2KHN1 245 aa14.32□□□□□ -0.12
PSPC1-204ENST00000492741 DAND5Q8N907 189 aa14.32□□□□□ -0.12
PSPC1-204ENST00000492741 PCP4L1A6NKN8 68 aa14.32□□□□□ -0.12
PSPC1-204ENST00000492741 ADAMTSL4-AS1Q5T5F5 129 aa14.32□□□□□ -0.12
PSPC1-204ENST00000492741 HIST1H4GQ99525 98 aa14.32□□□□□ -0.12
PSPC1-204ENST00000492741 MIR7-3HGQ8N6C7 128 aa14.3□□□□□ -0.12
PSPC1-204ENST00000492741 LITAFQ99732 161 aa14.3□□□□□ -0.12
PSPC1-204ENST00000492741 DDTP30046 118 aa14.29□□□□□ -0.12
PSPC1-204ENST00000492741 LINC00336Q6ZUF6 198 aa14.29□□□□□ -0.12
PSPC1-204ENST00000492741 NPC2P61916 151 aa14.28□□□□□ -0.12
PSPC1-204ENST00000492741 RPL18AQ02543 176 aaKnown RBP14.28□□□□□ -0.12
PSPC1-204ENST00000492741 SPANXB1Q9NS25 103 aaPredicted RBP14.28□□□□□ -0.12
PSPC1-204ENST00000492741 FRAS1Q86XX4 4008 aa14.27□□□□□ -0.12
PSPC1-204ENST00000492741 NDUFC2-KCTD14E9PQ53 114 aa14.27□□□□□ -0.12
PSPC1-204ENST00000492741 FUSP35637 526 aaKnown RBP eCLIP14.27□□□□□ -0.12
PSPC1-204ENST00000492741 CTAG1AP78358 180 aa14.27□□□□□ -0.12
PSPC1-204ENST00000492741 SPANXDQ9BXN6 97 aa14.27□□□□□ -0.13
PSPC1-204ENST00000492741 SPANXCQ9NY87 97 aa14.27□□□□□ -0.13
PSPC1-204ENST00000492741 IGLV5-52A0A0A0MRZ9 124 aa14.26□□□□□ -0.13
PSPC1-204ENST00000492741 GAGE2EQ4V326 116 aa14.26□□□□□ -0.13
PSPC1-204ENST00000492741 Q6ZVH6 145 aa14.26□□□□□ -0.13
PSPC1-204ENST00000492741 C9orf163Q8N9P6 203 aa14.26□□□□□ -0.13
PSPC1-204ENST00000492741 GAGE2DQ9UEU5 116 aa14.26□□□□□ -0.13
PSPC1-204ENST00000492741 KMT2CQ8NEZ4 4911 aaKnown RBP14.26□□□□□ -0.13
PSPC1-204ENST00000492741 LOC107984640A0A0U1RRK4 108 aa14.25□□□□□ -0.13
PSPC1-204ENST00000492741 Q6ZRP5 223 aa14.24□□□□□ -0.13
PSPC1-204ENST00000492741 GCSHP23434 173 aa14.24□□□□□ -0.13
PSPC1-204ENST00000492741 LINC01620Q4KN68 170 aa14.24□□□□□ -0.13
PSPC1-204ENST00000492741 TLX1NBP0CAT3 122 aa14.23□□□□□ -0.13
PSPC1-204ENST00000492741 HSD52Q0P140 79 aa14.23□□□□□ -0.13
PSPC1-204ENST00000492741 GAGE2BQ13066 116 aa14.23□□□□□ -0.13
PSPC1-204ENST00000492741 MUSTN1Q8IVN3 82 aa14.23□□□□□ -0.13
PSPC1-204ENST00000492741 SND1-IT1Q9HBX3 110 aa14.23□□□□□ -0.13
PSPC1-204ENST00000492741 TAL2Q16559 108 aa14.22□□□□□ -0.13
PSPC1-204ENST00000492741 LINC00308Q8TCZ7 52 aa14.22□□□□□ -0.13
PSPC1-204ENST00000492741 COPS9Q8WXC6 57 aa14.22□□□□□ -0.13
PSPC1-204ENST00000492741 IFITM1P13164 125 aa14.21□□□□□ -0.13
PSPC1-204ENST00000492741 XAGE1AQ9HD64 81 aa14.21□□□□□ -0.13
PSPC1-204ENST00000492741 PKIGQ9Y2B9 76 aa14.21□□□□□ -0.13
PSPC1-204ENST00000492741 DNAH17Q9UFH2 4485 aa14.21□□□□□ -0.13
PSPC1-204ENST00000492741 PGPEP1Q9NXJ5 209 aa14.2□□□□□ -0.14
PSPC1-204ENST00000492741 KRTAP10-2P60368 255 aa14.19□□□□□ -0.14
PSPC1-204ENST00000492741 CEND1Q8N111 149 aa14.19□□□□□ -0.14
PSPC1-204ENST00000492741 RYR2Q92736 4967 aa14.18□□□□□ -0.14
PSPC1-204ENST00000492741 SOSTDC1Q6X4U4 206 aa14.18□□□□□ -0.14
PSPC1-204ENST00000492741 IGKV2-24A0A0C4DH68 120 aa14.17□□□□□ -0.14
PSPC1-204ENST00000492741 EIF4EBP3O60516 100 aaPredicted RBP14.17□□□□□ -0.14
PSPC1-204ENST00000492741 HINT1P49773 126 aaPredicted RBP14.17□□□□□ -0.14
PSPC1-204ENST00000492741 PTTG1IPP53801 180 aa14.17□□□□□ -0.14
PSPC1-204ENST00000492741 RPL24P83731 157 aaKnown RBP14.17□□□□□ -0.14
PSPC1-204ENST00000492741 SDIM1Q6ZPB5 146 aa14.16□□□□□ -0.14
PSPC1-204ENST00000492741 C16orf90A8MZG2 172 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms