RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 TMEM223A0PJW6 202 aa14.93□□□□□ -0.02
SCN5A-213ENST00000491944 IGKCP01834 107 aa14.93□□□□□ -0.02
SCN5A-213ENST00000491944 PET117Q6UWS5 81 aa14.93□□□□□ -0.02
SCN5A-213ENST00000491944 C6orf48Q9UBA6 75 aa14.92□□□□□ -0.02
SCN5A-213ENST00000491944 DYNC1H1Q14204 4646 aaKnown RBP14.91□□□□□ -0.02
SCN5A-213ENST00000491944 CXCL5P42830 114 aa14.91□□□□□ -0.02
SCN5A-213ENST00000491944 RNF151Q2KHN1 245 aa14.91□□□□□ -0.02
SCN5A-213ENST00000491944 HIST1H2BLQ99880 126 aa14.91□□□□□ -0.02
SCN5A-213ENST00000491944 PKIGQ9Y2B9 76 aa14.91□□□□□ -0.02
SCN5A-213ENST00000491944 CDK2AP2O75956 126 aa14.9□□□□□ -0.02
SCN5A-213ENST00000491944 LINC01545Q5VT33 79 aa14.9□□□□□ -0.02
SCN5A-213ENST00000491944 Q6ZSA8 131 aa14.9□□□□□ -0.02
SCN5A-213ENST00000491944 TRBV30A0A0K0K1B3 111 aa14.89□□□□□ -0.03
SCN5A-213ENST00000491944 LOC107984640A0A0U1RRK4 108 aa14.89□□□□□ -0.03
SCN5A-213ENST00000491944 HAMPP81172 84 aa14.89□□□□□ -0.03
SCN5A-213ENST00000491944 CHTF8P0CG12 524 aa14.88□□□□□ -0.03
SCN5A-213ENST00000491944 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.88□□□□□ -0.03
SCN5A-213ENST00000491944 LRP1BQ9NZR2 4599 aa14.87□□□□□ -0.03
SCN5A-213ENST00000491944 IGKV2-24A0A0C4DH68 120 aa14.87□□□□□ -0.03
SCN5A-213ENST00000491944 C5orf52A6NGY3 159 aa14.87□□□□□ -0.03
SCN5A-213ENST00000491944 RPL18AQ02543 176 aaKnown RBP14.87□□□□□ -0.03
SCN5A-213ENST00000491944 A0A096LNI7 61 aa14.86□□□□□ -0.03
SCN5A-213ENST00000491944 BIRC6Q9NR09 4857 aa14.86□□□□□ -0.03
SCN5A-213ENST00000491944 C20orf202A1L168 122 aa14.85□□□□□ -0.03
SCN5A-213ENST00000491944 PANO1I0J062 215 aa14.85□□□□□ -0.03
SCN5A-213ENST00000491944 XGP55808 180 aa14.85□□□□□ -0.03
SCN5A-213ENST00000491944 HERVK_113P61574 105 aa14.85□□□□□ -0.03
SCN5A-213ENST00000491944 GAGE2BQ13066 116 aa14.85□□□□□ -0.03
SCN5A-213ENST00000491944 C9orf116Q5BN46 136 aaPredicted RBP14.85□□□□□ -0.03
SCN5A-213ENST00000491944 DPH3Q96FX2 82 aa14.85□□□□□ -0.03
SCN5A-213ENST00000491944 TMA7Q9Y2S6 64 aaKnown RBP14.84□□□□□ -0.03
SCN5A-213ENST00000491944 PTTG1IPP53801 180 aa14.83□□□□□ -0.04
SCN5A-213ENST00000491944 MAJINQ3KP22 176 aa14.83□□□□□ -0.04
SCN5A-213ENST00000491944 SCXQ7RTU7 201 aa14.82□□□□□ -0.04
SCN5A-213ENST00000491944 SPACA4Q8TDM5 124 aa14.82□□□□□ -0.04
SCN5A-213ENST00000491944 TLX1NBP0CAT3 122 aa14.81□□□□□ -0.04
SCN5A-213ENST00000491944 CIRBPQ14011 172 aaKnown RBP14.81□□□□□ -0.04
SCN5A-213ENST00000491944 LINC00474Q9P2X8 69 aa14.81□□□□□ -0.04
SCN5A-213ENST00000491944 LEPROTO15243 131 aa14.8□□□□□ -0.04
SCN5A-213ENST00000491944 NDUFC2-KCTD14E9PQ53 114 aa14.79□□□□□ -0.04
SCN5A-213ENST00000491944 GAGE2EQ4V326 116 aa14.79□□□□□ -0.04
SCN5A-213ENST00000491944 Q6ZRP5 223 aa14.79□□□□□ -0.04
SCN5A-213ENST00000491944 CIRBP-AS1Q8TBR5 109 aa14.79□□□□□ -0.04
SCN5A-213ENST00000491944 PLEKHB2Q96CS7 222 aa14.79□□□□□ -0.04
SCN5A-213ENST00000491944 GAGE2DQ9UEU5 116 aa14.79□□□□□ -0.04
SCN5A-213ENST00000491944 SFTA2Q6UW10 78 aa14.78□□□□□ -0.04
SCN5A-213ENST00000491944 ZNF625Q96I27 306 aaPredicted RBP14.77□□□□□ -0.04
SCN5A-213ENST00000491944 A0A087WYN8 130 aa14.76□□□□□ -0.05
SCN5A-213ENST00000491944 TSPEAR-AS2P59090 65 aa14.76□□□□□ -0.05
SCN5A-213ENST00000491944 ATOH7Q8N100 152 aa14.76□□□□□ -0.05
SCN5A-213ENST00000491944 J3QQQ9 107 aa14.75□□□□□ -0.05
SCN5A-213ENST00000491944 STPG4Q8N801 248 aa14.75□□□□□ -0.05
SCN5A-213ENST00000491944 NDUFA12Q9UI09 145 aa14.75□□□□□ -0.05
SCN5A-213ENST00000491944 LGALS3P17931 250 aaKnown RBP14.74□□□□□ -0.05
SCN5A-213ENST00000491944 AKR1D1P51857 326 aa14.74□□□□□ -0.05
SCN5A-213ENST00000491944 E9PLD3 99 aa14.73□□□□□ -0.05
SCN5A-213ENST00000491944 PFN2P35080 140 aa14.73□□□□□ -0.05
SCN5A-213ENST00000491944 ERG28Q9UKR5 140 aa14.73□□□□□ -0.05
SCN5A-213ENST00000491944 SMR3BP02814 79 aaPredicted RBP14.73□□□□□ -0.05
SCN5A-213ENST00000491944 MYMXA0A1B0GTQ4 84 aa14.72□□□□□ -0.05
SCN5A-213ENST00000491944 PLAC8Q9NZF1 115 aa14.72□□□□□ -0.05
SCN5A-213ENST00000491944 APOBP04114 4563 aaKnown RBP14.71□□□□□ -0.05
SCN5A-213ENST00000491944 DNAH8Q96JB1 4490 aa14.7□□□□□ -0.06
SCN5A-213ENST00000491944 HERV-K104P63124 156 aa14.7□□□□□ -0.06
SCN5A-213ENST00000491944 XAGE1AQ9HD64 81 aa14.7□□□□□ -0.06
SCN5A-213ENST00000491944 NMUP48645 174 aa14.69□□□□□ -0.06
SCN5A-213ENST00000491944 KIAA1109Q2LD37 5005 aa14.69□□□□□ -0.06
SCN5A-213ENST00000491944 SCGB1D1O95968 90 aa14.68□□□□□ -0.06
SCN5A-213ENST00000491944 COX17Q14061 63 aa14.68□□□□□ -0.06
SCN5A-213ENST00000491944 MEIG1Q5JSS6 88 aa14.68□□□□□ -0.06
SCN5A-213ENST00000491944 C9orf129Q5T035 196 aaKnown RBP14.68□□□□□ -0.06
SCN5A-213ENST00000491944 A0A1W2PNN7 141 aa14.67□□□□□ -0.06
SCN5A-213ENST00000491944 A0A0U1RRA0 63 aa14.66□□□□□ -0.06
SCN5A-213ENST00000491944 FAM168BA1KXE4 195 aa14.66□□□□□ -0.06
SCN5A-213ENST00000491944 LINC00158P58513 81 aa14.66□□□□□ -0.06
SCN5A-213ENST00000491944 IGKV2D-26A0A0A0MRZ7 120 aa14.65□□□□□ -0.06
SCN5A-213ENST00000491944 FAM19A5Q7Z5A7 132 aaPredicted RBP14.65□□□□□ -0.06
SCN5A-213ENST00000491944 SMIM13P0DJ93 91 aa14.64□□□□□ -0.07
SCN5A-213ENST00000491944 ANKRD39Q53RE8 183 aa14.64□□□□□ -0.07
SCN5A-213ENST00000491944 LINC00528Q8N1L1 170 aa14.64□□□□□ -0.07
SCN5A-213ENST00000491944 Q8N1X5 172 aa14.63□□□□□ -0.07
SCN5A-213ENST00000491944 RYR1P21817 5038 aa14.62□□□□□ -0.07
SCN5A-213ENST00000491944 LINC00587B1AMM8 73 aa14.62□□□□□ -0.07
SCN5A-213ENST00000491944 HSPG2P98160 4391 aa14.62□□□□□ -0.07
SCN5A-213ENST00000491944 HSBP1L1C9JCN9 74 aa14.61□□□□□ -0.07
SCN5A-213ENST00000491944 SND1-IT1Q9HBX3 110 aa14.61□□□□□ -0.07
SCN5A-213ENST00000491944 KRTAP17-1Q9BYP8 105 aa14.6□□□□□ -0.07
SCN5A-213ENST00000491944 ZNF815PA8K554 130 aa14.6□□□□□ -0.07
SCN5A-213ENST00000491944 EPM2AB3EWF7 344 aa14.6□□□□□ -0.07
SCN5A-213ENST00000491944 FAM229AH3BQW9 127 aa14.6□□□□□ -0.07
SCN5A-213ENST00000491944 TTTY13Q9BZ97 58 aa14.6□□□□□ -0.07
SCN5A-213ENST00000491944 Q5VSD8 79 aa14.59□□□□□ -0.07
SCN5A-213ENST00000491944 C7orf33Q8WU49 177 aa14.59□□□□□ -0.07
SCN5A-213ENST00000491944 SERTAD4-AS1Q5TG53 156 aa14.58□□□□□ -0.08
SCN5A-213ENST00000491944 A0A0J9YXY3 114 aa14.57□□□□□ -0.08
SCN5A-213ENST00000491944 M0QXV9 152 aa14.57□□□□□ -0.08
SCN5A-213ENST00000491944 PHF5AQ7RTV0 110 aaKnown RBP14.57□□□□□ -0.08
SCN5A-213ENST00000491944 KRTAP7-1Q8IUC3 87 aa14.57□□□□□ -0.08
SCN5A-213ENST00000491944 MIR7-3HGQ8N6C7 128 aa14.57□□□□□ -0.08
SCN5A-213ENST00000491944 JOSD1Q15040 202 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms