RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 TMEM223A0PJW6 202 aa8.94□□□□□ -0.98
CDK9-204ENST00000491521 HSBP1L1C9JCN9 74 aa8.94□□□□□ -0.98
CDK9-204ENST00000491521 INAFM2P0DMQ5 153 aa8.94□□□□□ -0.98
CDK9-204ENST00000491521 LINC01561Q8N1V8 128 aa8.94□□□□□ -0.98
CDK9-204ENST00000491521 STPG4Q8N801 248 aa8.94□□□□□ -0.98
CDK9-204ENST00000491521 TOMM7Q9P0U1 55 aa8.94□□□□□ -0.98
CDK9-204ENST00000491521 hDV102S1A0JD36 115 aa8.93□□□□□ -0.98
CDK9-204ENST00000491521 USP17L23D6RBM5 183 aa8.93□□□□□ -0.98
CDK9-204ENST00000491521 PRSS2P07478 247 aa8.93□□□□□ -0.98
CDK9-204ENST00000491521 LINC01620Q4KN68 170 aa8.93□□□□□ -0.98
CDK9-204ENST00000491521 PYY3Q5JQD4 70 aa8.93□□□□□ -0.98
CDK9-204ENST00000491521 ORAOV1Q8WV07 137 aa8.93□□□□□ -0.98
CDK9-204ENST00000491521 FAM30AQ9NZY2 134 aa8.93□□□□□ -0.98
CDK9-204ENST00000491521 SMIM1B2RUZ4 78 aa8.92□□□□□ -0.98
CDK9-204ENST00000491521 HIGD2BQ4VC39 106 aa8.92□□□□□ -0.98
CDK9-204ENST00000491521 MYCBP2O75592 4640 aa8.91□□□□□ -0.98
CDK9-204ENST00000491521 FAM229AH3BQW9 127 aa8.91□□□□□ -0.98
CDK9-204ENST00000491521 ZNF561-AS1K7EIQ3 104 aa8.91□□□□□ -0.98
CDK9-204ENST00000491521 MAJINQ3KP22 176 aa8.91□□□□□ -0.98
CDK9-204ENST00000491521 C6orf226Q5I0X4 101 aa8.91□□□□□ -0.98
CDK9-204ENST00000491521 SPAG11BQ08648 103 aa8.9□□□□□ -0.98
CDK9-204ENST00000491521 C15orf56Q8N910 161 aa8.9□□□□□ -0.98
CDK9-204ENST00000491521 COX7B2Q8TF08 81 aa8.9□□□□□ -0.98
CDK9-204ENST00000491521 FLG2Q5D862 2391 aaPredicted RBP8.89□□□□□ -0.99
CDK9-204ENST00000491521 LEPROTO15243 131 aa8.89□□□□□ -0.99
CDK9-204ENST00000491521 C14orf177Q52M58 125 aa8.89□□□□□ -0.99
CDK9-204ENST00000491521 PLEKHB2Q96CS7 222 aa8.89□□□□□ -0.99
CDK9-204ENST00000491521 LINC00526Q96FQ7 95 aa8.89□□□□□ -0.99
CDK9-204ENST00000491521 VAMP8Q9BV40 100 aa8.89□□□□□ -0.99
CDK9-204ENST00000491521 IGLV5-39A0A0G2JS06 123 aa8.88□□□□□ -0.99
CDK9-204ENST00000491521 E9PLD3 99 aa8.88□□□□□ -0.99
CDK9-204ENST00000491521 LGALS3P17931 250 aaKnown RBP8.88□□□□□ -0.99
CDK9-204ENST00000491521 NMUP48645 174 aa8.88□□□□□ -0.99
CDK9-204ENST00000491521 CKS1BP61024 79 aa8.88□□□□□ -0.99
CDK9-204ENST00000491521 ANKRD39Q53RE8 183 aa8.88□□□□□ -0.99
CDK9-204ENST00000491521 DMBT1Q9UGM3 2413 aaPredicted RBP8.88□□□□□ -0.99
CDK9-204ENST00000491521 GVQW2A0A096LPI5 108 aaPredicted RBP8.87□□□□□ -0.99
CDK9-204ENST00000491521 J3QQQ9 107 aa8.87□□□□□ -0.99
CDK9-204ENST00000491521 S100A12P80511 92 aa8.87□□□□□ -0.99
CDK9-204ENST00000491521 Q8IZM0 81 aa8.87□□□□□ -0.99
CDK9-204ENST00000491521 PAM16Q9Y3D7 125 aa8.87□□□□□ -0.99
CDK9-204ENST00000491521 SPATA45Q537H7 98 aa8.86□□□□□ -0.99
CDK9-204ENST00000491521 CAMK2N2Q96S95 79 aa8.86□□□□□ -0.99
CDK9-204ENST00000491521 IGKV2D-26A0A0A0MRZ7 120 aa8.85□□□□□ -0.99
CDK9-204ENST00000491521 SMIM6P0DI80 62 aa8.85□□□□□ -0.99
CDK9-204ENST00000491521 KIAA0087Q14695 138 aa8.85□□□□□ -0.99
CDK9-204ENST00000491521 C2orf82Q6UX34 121 aa8.85□□□□□ -0.99
CDK9-204ENST00000491521 TSPEAR-AS2P59090 65 aa8.84□□□□□ -0.99
CDK9-204ENST00000491521 C2orf48Q96LS8 159 aa8.84□□□□□ -0.99
CDK9-204ENST00000491521 NDUFA12Q9UI09 145 aa8.84□□□□□ -0.99
CDK9-204ENST00000491521 MYMXA0A1B0GTQ4 84 aa8.83□□□□□ -1
CDK9-204ENST00000491521 NDUFA1O15239 70 aa8.83□□□□□ -1
CDK9-204ENST00000491521 CXCL5P42830 114 aa8.83□□□□□ -1
CDK9-204ENST00000491521 SYCNQ0VAF6 134 aa8.83□□□□□ -1
CDK9-204ENST00000491521 UNQ6190/PRO20217Q6UXQ8 127 aa8.83□□□□□ -1
CDK9-204ENST00000491521 Q6ZSA8 131 aa8.83□□□□□ -1
CDK9-204ENST00000491521 LINC00528Q8N1L1 170 aa8.83□□□□□ -1
CDK9-204ENST00000491521 F8WDY8 70 aa8.82□□□□□ -1
CDK9-204ENST00000491521 SCXQ7RTU7 201 aa8.82□□□□□ -1
CDK9-204ENST00000491521 ZNF625Q96I27 306 aaPredicted RBP8.82□□□□□ -1
CDK9-204ENST00000491521 TTTY13Q9BZ97 58 aa8.82□□□□□ -1
CDK9-204ENST00000491521 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.81□□□□□ -1
CDK9-204ENST00000491521 ZNF815PA8K554 130 aa8.81□□□□□ -1
CDK9-204ENST00000491521 C10orf25Q5T742 122 aa8.81□□□□□ -1
CDK9-204ENST00000491521 Q6ZRU5 148 aa8.81□□□□□ -1
CDK9-204ENST00000491521 C12orf57Q99622 126 aa8.81□□□□□ -1
CDK9-204ENST00000491521 SLPIP03973 132 aa8.8□□□□□ -1
CDK9-204ENST00000491521 PLA2G1BP04054 148 aaKnown RBP8.8□□□□□ -1
CDK9-204ENST00000491521 SFTA2Q6UW10 78 aa8.8□□□□□ -1
CDK9-204ENST00000491521 PCP2Q8IVA1 136 aa8.8□□□□□ -1
CDK9-204ENST00000491521 C14orf144Q96I85 54 aa8.8□□□□□ -1
CDK9-204ENST00000491521 CARD19Q96LW7 228 aa8.8□□□□□ -1
CDK9-204ENST00000491521 HERV-K104P63124 156 aa8.79□□□□□ -1
CDK9-204ENST00000491521 COX8AP10176 69 aa8.78□□□□□ -1
CDK9-204ENST00000491521 CNBPP62633 177 aaKnown RBP8.78□□□□□ -1
CDK9-204ENST00000491521 MEIG1Q5JSS6 88 aa8.78□□□□□ -1
CDK9-204ENST00000491521 SCGB1D4Q6XE38 83 aa8.78□□□□□ -1
CDK9-204ENST00000491521 TRBV30A0A0K0K1B3 111 aa8.77□□□□□ -1.01
CDK9-204ENST00000491521 PFN2P35080 140 aa8.77□□□□□ -1.01
CDK9-204ENST00000491521 C9orf116Q5BN46 136 aaPredicted RBP8.77□□□□□ -1.01
CDK9-204ENST00000491521 LINC00518Q8N0U6 118 aa8.77□□□□□ -1.01
CDK9-204ENST00000491521 CIRBP-AS1Q8TBR5 109 aa8.77□□□□□ -1.01
CDK9-204ENST00000491521 C6orf48Q9UBA6 75 aa8.77□□□□□ -1.01
CDK9-204ENST00000491521 A0A0U1RRA0 63 aa8.76□□□□□ -1.01
CDK9-204ENST00000491521 LINC00587B1AMM8 73 aa8.76□□□□□ -1.01
CDK9-204ENST00000491521 LINC00158P58513 81 aa8.76□□□□□ -1.01
CDK9-204ENST00000491521 CIRBPQ14011 172 aaKnown RBP8.76□□□□□ -1.01
CDK9-204ENST00000491521 RNF151Q2KHN1 245 aa8.76□□□□□ -1.01
CDK9-204ENST00000491521 SLC25A34Q6PIV7 304 aa8.76□□□□□ -1.01
CDK9-204ENST00000491521 ERG28Q9UKR5 140 aa8.76□□□□□ -1.01
CDK9-204ENST00000491521 A0A0J9YXY3 114 aa8.75□□□□□ -1.01
CDK9-204ENST00000491521 BOD1L2Q8IYS8 172 aa8.75□□□□□ -1.01
CDK9-204ENST00000491521 PRO1933Q9H354 126 aa8.75□□□□□ -1.01
CDK9-204ENST00000491521 J3QL48 77 aa8.74□□□□□ -1.01
CDK9-204ENST00000491521 SMIM13P0DJ93 91 aa8.74□□□□□ -1.01
CDK9-204ENST00000491521 C9orf163Q8N9P6 203 aa8.74□□□□□ -1.01
CDK9-204ENST00000491521 LOC107984640A0A0U1RRK4 108 aa8.73□□□□□ -1.01
CDK9-204ENST00000491521 DLEU1O43261 78 aa8.73□□□□□ -1.01
CDK9-204ENST00000491521 RPL18AQ02543 176 aaKnown RBP8.73□□□□□ -1.01
CDK9-204ENST00000491521 TP73-AS1Q9UF72 201 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms