RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 A0A096LNJ9 63 aa10.04□□□□□ -0.8
PFDN6-207ENST00000491382 KRTAP29-1A8MX34 341 aaPredicted RBP10.04□□□□□ -0.8
PFDN6-207ENST00000491382 C9orf116Q5BN46 136 aaPredicted RBP10.04□□□□□ -0.8
PFDN6-207ENST00000491382 Q6ZRP5 223 aa10.04□□□□□ -0.8
PFDN6-207ENST00000491382 HERC1Q15751 4861 aa10.04□□□□□ -0.8
PFDN6-207ENST00000491382 ATP5LO75964 103 aa10.03□□□□□ -0.8
PFDN6-207ENST00000491382 CXCL5P42830 114 aa10.03□□□□□ -0.8
PFDN6-207ENST00000491382 NDUFA6P56556 154 aa10.03□□□□□ -0.8
PFDN6-207ENST00000491382 PMCHL1Q16048 86 aa10.03□□□□□ -0.8
PFDN6-207ENST00000491382 CHCHD1Q96BP2 118 aaKnown RBP10.03□□□□□ -0.8
PFDN6-207ENST00000491382 A0A1W2PNN7 141 aa10.02□□□□□ -0.81
PFDN6-207ENST00000491382 SMIM1B2RUZ4 78 aa10.02□□□□□ -0.81
PFDN6-207ENST00000491382 NDUFC2-KCTD14E9PQ53 114 aa10.02□□□□□ -0.81
PFDN6-207ENST00000491382 H3BRM9 83 aa10.02□□□□□ -0.81
PFDN6-207ENST00000491382 HNRNPA3P51991 378 aaKnown RBP10.02□□□□□ -0.81
PFDN6-207ENST00000491382 PRR3P79522 188 aaKnown RBP10.02□□□□□ -0.81
PFDN6-207ENST00000491382 GAGE2EQ4V326 116 aa10.02□□□□□ -0.81
PFDN6-207ENST00000491382 PDZD11Q5EBL8 140 aa10.02□□□□□ -0.81
PFDN6-207ENST00000491382 GAGE2DQ9UEU5 116 aa10.02□□□□□ -0.81
PFDN6-207ENST00000491382 F8VRH5 84 aa10.01□□□□□ -0.81
PFDN6-207ENST00000491382 OXTP01178 125 aa10.01□□□□□ -0.81
PFDN6-207ENST00000491382 SPINK8P0C7L1 97 aa9.99□□□□□ -0.81
PFDN6-207ENST00000491382 IGLC3P0DOY3 106 aa9.99□□□□□ -0.81
PFDN6-207ENST00000491382 COX7B2Q8TF08 81 aa9.99□□□□□ -0.81
PFDN6-207ENST00000491382 DMBT1Q9UGM3 2413 aaPredicted RBP9.98□□□□□ -0.81
PFDN6-207ENST00000491382 TRGC2P03986 189 aa9.98□□□□□ -0.81
PFDN6-207ENST00000491382 BAGE3Q86Y29 109 aa9.98□□□□□ -0.81
PFDN6-207ENST00000491382 HSBP1O75506 76 aa9.97□□□□□ -0.81
PFDN6-207ENST00000491382 PHF5AQ7RTV0 110 aaKnown RBP9.96□□□□□ -0.82
PFDN6-207ENST00000491382 FAM19A5Q7Z5A7 132 aaPredicted RBP9.96□□□□□ -0.82
PFDN6-207ENST00000491382 FAM168BA1KXE4 195 aa9.95□□□□□ -0.82
PFDN6-207ENST00000491382 PKHD1L1Q86WI1 4243 aa9.94□□□□□ -0.82
PFDN6-207ENST00000491382 ZNF22P17026 224 aaPredicted RBP9.94□□□□□ -0.82
PFDN6-207ENST00000491382 C9orf129Q5T035 196 aaKnown RBP9.94□□□□□ -0.82
PFDN6-207ENST00000491382 CHTOPQ9Y3Y2 248 aaKnown RBP9.94□□□□□ -0.82
PFDN6-207ENST00000491382 M0QXV9 152 aa9.93□□□□□ -0.82
PFDN6-207ENST00000491382 TMEM170BQ5T4T1 132 aa9.93□□□□□ -0.82
PFDN6-207ENST00000491382 IFI27L1Q96BM0 104 aa9.93□□□□□ -0.82
PFDN6-207ENST00000491382 TRAV12-1A0A0B4J245 112 aa9.92□□□□□ -0.82
PFDN6-207ENST00000491382 IGLV5-39A0A0G2JS06 123 aa9.92□□□□□ -0.82
PFDN6-207ENST00000491382 C11orf86A6NJI1 115 aa9.92□□□□□ -0.82
PFDN6-207ENST00000491382 COLCA2A8K830 154 aa9.92□□□□□ -0.82
PFDN6-207ENST00000491382 SPINK6Q6UWN8 80 aa9.92□□□□□ -0.82
PFDN6-207ENST00000491382 PSORS1C2Q9UIG4 136 aa9.92□□□□□ -0.82
PFDN6-207ENST00000491382 FAM19A2Q8N3H0 131 aa9.91□□□□□ -0.82
PFDN6-207ENST00000491382 XAGE1AQ9HD64 81 aa9.91□□□□□ -0.82
PFDN6-207ENST00000491382 UBE2BP63146 152 aa9.9□□□□□ -0.82
PFDN6-207ENST00000491382 C1orf137Q5JT78 98 aa9.9□□□□□ -0.82
PFDN6-207ENST00000491382 SERF1AO75920 110 aa9.89□□□□□ -0.83
PFDN6-207ENST00000491382 SFTA2Q6UW10 78 aa9.89□□□□□ -0.83
PFDN6-207ENST00000491382 LEPROTL1O95214 131 aa9.88□□□□□ -0.83
PFDN6-207ENST00000491382 REG3GQ6UW15 175 aa9.88□□□□□ -0.83
PFDN6-207ENST00000491382 KRTAP7-1Q8IUC3 87 aa9.88□□□□□ -0.83
PFDN6-207ENST00000491382 LRP1Q07954 4544 aaKnown RBP9.87□□□□□ -0.83
PFDN6-207ENST00000491382 SRSF9Q13242 221 aaKnown RBP eCLIP9.87□□□□□ -0.83
PFDN6-207ENST00000491382 FAT3Q8TDW7 4589 aa9.86□□□□□ -0.83
PFDN6-207ENST00000491382 LBHQ53QV2 105 aaPredicted RBP9.86□□□□□ -0.83
PFDN6-207ENST00000491382 SERTAD4-AS1Q5TG53 156 aa9.86□□□□□ -0.83
PFDN6-207ENST00000491382 H0Y8G0 127 aa9.85□□□□□ -0.83
PFDN6-207ENST00000491382 LINC00310P59036 64 aa9.85□□□□□ -0.83
PFDN6-207ENST00000491382 ODF1Q14990 250 aa9.85□□□□□ -0.83
PFDN6-207ENST00000491382 HSPB8Q9UJY1 196 aa9.85□□□□□ -0.83
PFDN6-207ENST00000491382 C22orf24Q9Y442 160 aa9.85□□□□□ -0.83
PFDN6-207ENST00000491382 TMEM223A0PJW6 202 aa9.84□□□□□ -0.83
PFDN6-207ENST00000491382 SCO1O75880 301 aa9.84□□□□□ -0.83
PFDN6-207ENST00000491382 IGLV7-43P04211 117 aa9.84□□□□□ -0.83
PFDN6-207ENST00000491382 PFN2P35080 140 aa9.84□□□□□ -0.83
PFDN6-207ENST00000491382 COX17Q14061 63 aa9.84□□□□□ -0.83
PFDN6-207ENST00000491382 TP73-AS1Q9UF72 201 aa9.84□□□□□ -0.83
PFDN6-207ENST00000491382 ERG28Q9UKR5 140 aa9.84□□□□□ -0.83
PFDN6-207ENST00000491382 KRTAP11-1Q8IUC1 163 aa9.83□□□□□ -0.84
PFDN6-207ENST00000491382 PLA2G2DQ9UNK4 145 aa9.83□□□□□ -0.84
PFDN6-207ENST00000491382 MRPL55Q7Z7F7 128 aaKnown RBP9.82□□□□□ -0.84
PFDN6-207ENST00000491382 LINC01600Q96MT4 127 aa9.82□□□□□ -0.84
PFDN6-207ENST00000491382 MT1HL1P0DM35 61 aa9.81□□□□□ -0.84
PFDN6-207ENST00000491382 FABP4P15090 132 aa9.81□□□□□ -0.84
PFDN6-207ENST00000491382 DIRC1Q969H9 104 aa9.81□□□□□ -0.84
PFDN6-207ENST00000491382 ZNF625Q96I27 306 aaPredicted RBP9.81□□□□□ -0.84
PFDN6-207ENST00000491382 NUPR1O60356 82 aa9.8□□□□□ -0.84
PFDN6-207ENST00000491382 PLNP26678 52 aa9.8□□□□□ -0.84
PFDN6-207ENST00000491382 NKAPP1Q8N9T2 125 aa9.8□□□□□ -0.84
PFDN6-207ENST00000491382 IGLV5-37A0A075B6J1 123 aa9.78□□□□□ -0.84
PFDN6-207ENST00000491382 HIST1H2BKO60814 126 aa9.78□□□□□ -0.84
PFDN6-207ENST00000491382 HIST1H2BJP06899 126 aa9.78□□□□□ -0.84
PFDN6-207ENST00000491382 HIST1H2BOP23527 126 aa9.78□□□□□ -0.84
PFDN6-207ENST00000491382 HIST1H2BBP33778 126 aa9.78□□□□□ -0.84
PFDN6-207ENST00000491382 HIST1H2BDP58876 126 aa9.78□□□□□ -0.84
PFDN6-207ENST00000491382 HIST1H2BCP62807 126 aa9.78□□□□□ -0.84
PFDN6-207ENST00000491382 HIST2H2BEQ16778 126 aa9.78□□□□□ -0.84
PFDN6-207ENST00000491382 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.78□□□□□ -0.84
PFDN6-207ENST00000491382 HIST1H2BHQ93079 126 aa9.78□□□□□ -0.84
PFDN6-207ENST00000491382 HIST1H2BNQ99877 126 aa9.78□□□□□ -0.84
PFDN6-207ENST00000491382 HIST1H2BMQ99879 126 aa9.78□□□□□ -0.84
PFDN6-207ENST00000491382 MAP1LC3CQ9BXW4 147 aa9.78□□□□□ -0.84
PFDN6-207ENST00000491382 SND1-IT1Q9HBX3 110 aa9.78□□□□□ -0.84
PFDN6-207ENST00000491382 H0Y9J4 135 aa9.76□□□□□ -0.85
PFDN6-207ENST00000491382 DPM2O94777 84 aa9.76□□□□□ -0.85
PFDN6-207ENST00000491382 LINC00158P58513 81 aa9.76□□□□□ -0.85
PFDN6-207ENST00000491382 HERV-K104P63124 156 aa9.76□□□□□ -0.85
PFDN6-207ENST00000491382 RPL24P83731 157 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms