RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 LITAFQ99732 161 aa5.1□□□□□ -1.59
NPHP3-208ENST00000490993 RBM3P98179 157 aaKnown RBP5.1□□□□□ -1.59
NPHP3-208ENST00000490993 TLN2Q9Y4G6 2542 aa5.1□□□□□ -1.59
NPHP3-208ENST00000490993 M0R378 163 aa5.1□□□□□ -1.59
NPHP3-208ENST00000490993 FAM240AA0A1B0GVK7 77 aa5.1□□□□□ -1.59
NPHP3-208ENST00000490993 EPG5Q9HCE0 2579 aa5.09□□□□□ -1.59
NPHP3-208ENST00000490993 KRTAP24-1Q3LI83 254 aa5.09□□□□□ -1.59
NPHP3-208ENST00000490993 C2orf48Q96LS8 159 aa5.09□□□□□ -1.59
NPHP3-208ENST00000490993 TRAV23DV6A0A075B6W5 121 aa5.09□□□□□ -1.59
NPHP3-208ENST00000490993 C6orf99Q4VX62 202 aa5.09□□□□□ -1.59
NPHP3-208ENST00000490993 CFAP54Q96N23 3096 aa5.09□□□□□ -1.6
NPHP3-208ENST00000490993 UNQ6190/PRO20217Q6UXQ8 127 aa5.09□□□□□ -1.6
NPHP3-208ENST00000490993 USP34Q70CQ2 3546 aa5.08□□□□□ -1.6
NPHP3-208ENST00000490993 PRO0461Q9UI25 63 aa5.08□□□□□ -1.6
NPHP3-208ENST00000490993 C14orf132Q9NPU4 83 aa5.08□□□□□ -1.6
NPHP3-208ENST00000490993 XAGE1AQ9HD64 81 aa5.07□□□□□ -1.6
NPHP3-208ENST00000490993 MT-ATP8P03928 68 aa5.07□□□□□ -1.6
NPHP3-208ENST00000490993 HAMPP81172 84 aa5.06□□□□□ -1.6
NPHP3-208ENST00000490993 UBE2BP63146 152 aa5.06□□□□□ -1.6
NPHP3-208ENST00000490993 LINC01556Q5JQF7 62 aa5.06□□□□□ -1.6
NPHP3-208ENST00000490993 WFDC10BQ8IUB3 73 aa5.06□□□□□ -1.6
NPHP3-208ENST00000490993 LINC00337Q8N6G1 96 aa5.06□□□□□ -1.6
NPHP3-208ENST00000490993 ATP5EP2Q5VTU8 51 aa5.06□□□□□ -1.6
NPHP3-208ENST00000490993 LINC00526Q96FQ7 95 aa5.06□□□□□ -1.6
NPHP3-208ENST00000490993 IMUPQ9GZP8 106 aa5.06□□□□□ -1.6
NPHP3-208ENST00000490993 FUSP35637 526 aaKnown RBP eCLIP5.06□□□□□ -1.6
NPHP3-208ENST00000490993 ZNF73O43830 326 aaPredicted RBP5.05□□□□□ -1.6
NPHP3-208ENST00000490993 SLPIP03973 132 aa5.05□□□□□ -1.6
NPHP3-208ENST00000490993 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.05□□□□□ -1.6
NPHP3-208ENST00000490993 SOSTDC1Q6X4U4 206 aa5.05□□□□□ -1.6
NPHP3-208ENST00000490993 Q8N814 137 aa5.05□□□□□ -1.6
NPHP3-208ENST00000490993 C9orf116Q5BN46 136 aaPredicted RBP5.05□□□□□ -1.6
NPHP3-208ENST00000490993 LOC107984640A0A0U1RRK4 108 aa5.05□□□□□ -1.6
NPHP3-208ENST00000490993 ATOX1O00244 68 aa5.05□□□□□ -1.6
NPHP3-208ENST00000490993 SMCPP49901 116 aaPredicted RBP5.05□□□□□ -1.6
NPHP3-208ENST00000490993 FRYLO94915 3013 aa5.04□□□□□ -1.6
NPHP3-208ENST00000490993 Q6Q795 121 aa5.04□□□□□ -1.6
NPHP3-208ENST00000490993 DEFB105AQ8NG35 78 aa5.04□□□□□ -1.6
NPHP3-208ENST00000490993 DSPP15924 2871 aaKnown RBP5.04□□□□□ -1.6
NPHP3-208ENST00000490993 NDUFC2-KCTD14E9PQ53 114 aa5.04□□□□□ -1.6
NPHP3-208ENST00000490993 USP24Q9UPU5 2620 aa5.04□□□□□ -1.6
NPHP3-208ENST00000490993 A0A087WYN8 130 aa5.04□□□□□ -1.6
NPHP3-208ENST00000490993 WIPF1O43516 503 aa5.04□□□□□ -1.6
NPHP3-208ENST00000490993 C9orf153Q5TBE3 101 aa5.04□□□□□ -1.6
NPHP3-208ENST00000490993 DHRS4-AS1Q9P1J3 65 aa5.04□□□□□ -1.6
NPHP3-208ENST00000490993 C6orf223Q8N319 242 aa5.03□□□□□ -1.6
NPHP3-208ENST00000490993 XGP55808 180 aa5.03□□□□□ -1.6
NPHP3-208ENST00000490993 ESRGQ1W209 222 aa5.03□□□□□ -1.6
NPHP3-208ENST00000490993 SPEGQ15772 3267 aa5.03□□□□□ -1.6
NPHP3-208ENST00000490993 FAM236AA0A1B0GUQ0 79 aa5.03□□□□□ -1.6
NPHP3-208ENST00000490993 FAM236BA0A1B0GV22 79 aa5.03□□□□□ -1.6
NPHP3-208ENST00000490993 PRB2P02812 416 aaPredicted RBP5.03□□□□□ -1.6
NPHP3-208ENST00000490993 GVQW2A0A096LPI5 108 aaPredicted RBP5.02□□□□□ -1.61
NPHP3-208ENST00000490993 CELSR3Q9NYQ7 3312 aa5.02□□□□□ -1.61
NPHP3-208ENST00000490993 NUPR2A6NF83 97 aa5.02□□□□□ -1.61
NPHP3-208ENST00000490993 FAM104AQ969W3 186 aa5.02□□□□□ -1.61
NPHP3-208ENST00000490993 C2CD3Q4AC94 2353 aa5.02□□□□□ -1.61
NPHP3-208ENST00000490993 IGKV3D-7A0A0C4DH55 119 aa5.02□□□□□ -1.61
NPHP3-208ENST00000490993 NDUFV3P56181 108 aaKnown RBP5.02□□□□□ -1.61
NPHP3-208ENST00000490993 IGSF10Q6WRI0 2623 aa5.02□□□□□ -1.61
NPHP3-208ENST00000490993 TRBV10-3A0A0K0K1G6 114 aa5.02□□□□□ -1.61
NPHP3-208ENST00000490993 Q6ZQY7 126 aa5.02□□□□□ -1.61
NPHP3-208ENST00000490993 PRR3P79522 188 aaKnown RBP5.01□□□□□ -1.61
NPHP3-208ENST00000490993 ENHOQ6UWT2 76 aa5.01□□□□□ -1.61
NPHP3-208ENST00000490993 FREM2Q5SZK8 3169 aa5.01□□□□□ -1.61
NPHP3-208ENST00000490993 CCKP06307 115 aa5.01□□□□□ -1.61
NPHP3-208ENST00000490993 KRTAP10-11P60412 298 aa5.01□□□□□ -1.61
NPHP3-208ENST00000490993 NREPQ16612 68 aa5.01□□□□□ -1.61
NPHP3-208ENST00000490993 MTORP42345 2549 aa5.01□□□□□ -1.61
NPHP3-208ENST00000490993 ACANP16112 2415 aa5.01□□□□□ -1.61
NPHP3-208ENST00000490993 TMEM258P61165 79 aa5.01□□□□□ -1.61
NPHP3-208ENST00000490993 LINC00575Q6W349 94 aa5.01□□□□□ -1.61
NPHP3-208ENST00000490993 SMIM20Q8N5G0 67 aa5.01□□□□□ -1.61
NPHP3-208ENST00000490993 PRR34Q9NV39 138 aa5.01□□□□□ -1.61
NPHP3-208ENST00000490993 V9GYY9 64 aa5.01□□□□□ -1.61
NPHP3-208ENST00000490993 USP17L23D6RBM5 183 aa5□□□□□ -1.61
NPHP3-208ENST00000490993 NHLRC4P0CG21 123 aaPredicted RBP5□□□□□ -1.61
NPHP3-208ENST00000490993 Q6ZRU5 148 aa5□□□□□ -1.61
NPHP3-208ENST00000490993 IGKV2-28A0A075B6P5 120 aa5□□□□□ -1.61
NPHP3-208ENST00000490993 IGKV2D-28P01615 120 aa5□□□□□ -1.61
NPHP3-208ENST00000490993 C5orf47Q569G3 176 aa5□□□□□ -1.61
NPHP3-208ENST00000490993 TRBV7-6A0A0J9YX20 115 aa4.99□□□□□ -1.61
NPHP3-208ENST00000490993 Q6JHZ5 121 aa4.99□□□□□ -1.61
NPHP3-208ENST00000490993 CDIP1Q9H305 208 aa4.99□□□□□ -1.61
NPHP3-208ENST00000490993 FN1P02751 2386 aaKnown RBP4.99□□□□□ -1.61
NPHP3-208ENST00000490993 UBE2AP49459 152 aa4.99□□□□□ -1.61
NPHP3-208ENST00000490993 FAM19A5Q7Z5A7 132 aaPredicted RBP4.99□□□□□ -1.61
NPHP3-208ENST00000490993 C6orf48Q9UBA6 75 aa4.99□□□□□ -1.61
NPHP3-208ENST00000490993 DMXL1Q9Y485 3027 aa4.99□□□□□ -1.61
NPHP3-208ENST00000490993 LINC00474Q9P2X8 69 aa4.99□□□□□ -1.61
NPHP3-208ENST00000490993 FASNP49327 2511 aaKnown RBP4.99□□□□□ -1.61
NPHP3-208ENST00000490993 IGKV2-24A0A0C4DH68 120 aa4.98□□□□□ -1.61
NPHP3-208ENST00000490993 B9D2Q9BPU9 175 aa4.98□□□□□ -1.61
NPHP3-208ENST00000490993 Q8N3U1 123 aa4.98□□□□□ -1.61
NPHP3-208ENST00000490993 DNAH10OSP0CZ25 163 aa4.98□□□□□ -1.61
NPHP3-208ENST00000490993 PRYO14603 147 aa4.98□□□□□ -1.61
NPHP3-208ENST00000490993 KIAA0087Q14695 138 aa4.98□□□□□ -1.61
NPHP3-208ENST00000490993 DMXL2Q8TDJ6 3036 aa4.98□□□□□ -1.61
NPHP3-208ENST00000490993 MYO15AQ9UKN7 3530 aa4.97□□□□□ -1.61
NPHP3-208ENST00000490993 CDK2AP2O75956 126 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms