RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 VCX2Q9H322 139 aa11.37□□□□□ -0.59
UPK3B-205ENST00000490360 PPDPFQ9H3Y8 114 aa11.37□□□□□ -0.59
UPK3B-205ENST00000490360 RPL37AP8A6NKH3 93 aa11.36□□□□□ -0.59
UPK3B-205ENST00000490360 SRP19P09132 144 aaKnown RBP11.36□□□□□ -0.59
UPK3B-205ENST00000490360 CXCL5P42830 114 aa11.36□□□□□ -0.59
UPK3B-205ENST00000490360 SEC11AP67812 179 aa11.36□□□□□ -0.59
UPK3B-205ENST00000490360 ALKAL2Q6UX46 152 aa11.36□□□□□ -0.59
UPK3B-205ENST00000490360 KRTAP13-1Q8IUC0 172 aa11.36□□□□□ -0.59
UPK3B-205ENST00000490360 FAM19A3Q7Z5A8 133 aa11.35□□□□□ -0.59
UPK3B-205ENST00000490360 AMELXQ99217 191 aa11.35□□□□□ -0.59
UPK3B-205ENST00000490360 RPL23P62829 140 aaKnown RBP11.34□□□□□ -0.59
UPK3B-205ENST00000490360 CYSLTR1Q9Y271 337 aa11.34□□□□□ -0.59
UPK3B-205ENST00000490360 HERVK_113P63121 156 aa11.33□□□□□ -0.6
UPK3B-205ENST00000490360 ADIRFQ15847 76 aa11.33□□□□□ -0.6
UPK3B-205ENST00000490360 TMEM136Q6ZRR5 245 aa11.33□□□□□ -0.6
UPK3B-205ENST00000490360 PRELID3AQ96N28 172 aa11.33□□□□□ -0.6
UPK3B-205ENST00000490360 CRCT1Q9UGL9 99 aa11.33□□□□□ -0.6
UPK3B-205ENST00000490360 IGLV5-37A0A075B6J1 123 aa11.32□□□□□ -0.6
UPK3B-205ENST00000490360 PRSS47A8MTI9 375 aa11.32□□□□□ -0.6
UPK3B-205ENST00000490360 MRPL54Q6P161 138 aaKnown RBP11.32□□□□□ -0.6
UPK3B-205ENST00000490360 C2orf66Q6UXQ4 117 aa11.32□□□□□ -0.6
UPK3B-205ENST00000490360 A0A1B0GXF2 115 aa11.31□□□□□ -0.6
UPK3B-205ENST00000490360 PAPPA-AS1Q5QFB9 102 aa11.31□□□□□ -0.6
UPK3B-205ENST00000490360 SPAG11AQ6PDA7 123 aa11.31□□□□□ -0.6
UPK3B-205ENST00000490360 FP248Q71RG6 208 aaPredicted RBP11.31□□□□□ -0.6
UPK3B-205ENST00000490360 LAMTOR2Q9Y2Q5 125 aa11.31□□□□□ -0.6
UPK3B-205ENST00000490360 NKAPP1Q8N9T2 125 aa11.3□□□□□ -0.6
UPK3B-205ENST00000490360 NAT8Q9UHE5 227 aa11.3□□□□□ -0.6
UPK3B-205ENST00000490360 GAGE10A6NGK3 116 aa11.29□□□□□ -0.6
UPK3B-205ENST00000490360 PNRC1Q12796 327 aaPredicted RBP11.29□□□□□ -0.6
UPK3B-205ENST00000490360 LINC00337Q8N6G1 96 aa11.29□□□□□ -0.6
UPK3B-205ENST00000490360 GEMIN7Q9H840 131 aaKnown RBP11.29□□□□□ -0.6
UPK3B-205ENST00000490360 CDKN2A-AS1Q9UH64 79 aa11.29□□□□□ -0.6
UPK3B-205ENST00000490360 ZC2HC1BQ5TFG8 222 aa11.28□□□□□ -0.6
UPK3B-205ENST00000490360 MAP1LC3AQ9H492 121 aa11.28□□□□□ -0.6
UPK3B-205ENST00000490360 K7EMI3 77 aa11.27□□□□□ -0.61
UPK3B-205ENST00000490360 ASB16-AS1Q495Z4 193 aa11.27□□□□□ -0.61
UPK3B-205ENST00000490360 ORMDL2Q53FV1 153 aa11.27□□□□□ -0.61
UPK3B-205ENST00000490360 ATP5L2Q7Z4Y8 100 aa11.27□□□□□ -0.61
UPK3B-205ENST00000490360 FSIP2Q5CZC0 6907 aa11.27□□□□□ -0.61
UPK3B-205ENST00000490360 IGIPA6NJ69 53 aa11.26□□□□□ -0.61
UPK3B-205ENST00000490360 Q8N8P6 123 aa11.26□□□□□ -0.61
UPK3B-205ENST00000490360 LOC389332A0A1B0GUA5 103 aa11.25□□□□□ -0.61
UPK3B-205ENST00000490360 G0S2P27469 103 aa11.25□□□□□ -0.61
UPK3B-205ENST00000490360 PDZD11Q5EBL8 140 aa11.23□□□□□ -0.61
UPK3B-205ENST00000490360 SEC61BP60468 96 aaKnown RBP11.22□□□□□ -0.61
UPK3B-205ENST00000490360 GNB1LQ9BYB4 327 aa11.22□□□□□ -0.61
UPK3B-205ENST00000490360 IGKV2-28A0A075B6P5 120 aa11.21□□□□□ -0.61
UPK3B-205ENST00000490360 IGKV2D-28P01615 120 aa11.21□□□□□ -0.61
UPK3B-205ENST00000490360 PRLHP81277 87 aa11.21□□□□□ -0.61
UPK3B-205ENST00000490360 C4orf48Q5BLP8 95 aa11.21□□□□□ -0.61
UPK3B-205ENST00000490360 COX7B2Q8TF08 81 aa11.21□□□□□ -0.61
UPK3B-205ENST00000490360 SMIM1B2RUZ4 78 aa11.2□□□□□ -0.62
UPK3B-205ENST00000490360 KRTAP13-3Q3SY46 172 aa11.2□□□□□ -0.62
UPK3B-205ENST00000490360 FAM19A1Q7Z5A9 133 aa11.2□□□□□ -0.62
UPK3B-205ENST00000490360 PLEKHB2Q96CS7 222 aa11.2□□□□□ -0.62
UPK3B-205ENST00000490360 TIMM17AQ99595 171 aa11.2□□□□□ -0.62
UPK3B-205ENST00000490360 C3orf22Q8N5N4 141 aa11.18□□□□□ -0.62
UPK3B-205ENST00000490360 TMEM126AQ9H061 195 aa11.18□□□□□ -0.62
UPK3B-205ENST00000490360 RAB5BP61020 215 aa11.17□□□□□ -0.62
UPK3B-205ENST00000490360 NXT2Q9NPJ8 142 aaKnown RBP11.17□□□□□ -0.62
UPK3B-205ENST00000490360 SRSF3P84103 164 aaKnown RBP11.16□□□□□ -0.62
UPK3B-205ENST00000490360 PEA15Q15121 130 aa11.16□□□□□ -0.62
UPK3B-205ENST00000490360 CBLN2Q8IUK8 224 aa11.16□□□□□ -0.62
UPK3B-205ENST00000490360 TINCRA0A1B0GVN0 87 aa11.15□□□□□ -0.62
UPK3B-205ENST00000490360 IGLV5-45A0A087WSX0 123 aa11.14□□□□□ -0.63
UPK3B-205ENST00000490360 C9JQL5 133 aa11.14□□□□□ -0.63
UPK3B-205ENST00000490360 ATP5LO75964 103 aa11.14□□□□□ -0.63
UPK3B-205ENST00000490360 RPL24P83731 157 aaKnown RBP11.13□□□□□ -0.63
UPK3B-205ENST00000490360 AKAP14Q86UN6 197 aa11.13□□□□□ -0.63
UPK3B-205ENST00000490360 TOMM6Q96B49 74 aa11.13□□□□□ -0.63
UPK3B-205ENST00000490360 A0A1B0GVG6 124 aa11.12□□□□□ -0.63
UPK3B-205ENST00000490360 TMEM238C9JI98 176 aa11.12□□□□□ -0.63
UPK3B-205ENST00000490360 M0R378 163 aa11.12□□□□□ -0.63
UPK3B-205ENST00000490360 SCO1O75880 301 aa11.12□□□□□ -0.63
UPK3B-205ENST00000490360 ERASQ7Z444 233 aa11.12□□□□□ -0.63
UPK3B-205ENST00000490360 ZNF706Q9Y5V0 76 aaPredicted RBP11.12□□□□□ -0.63
UPK3B-205ENST00000490360 KRTAP4-1Q9BYQ7 146 aa11.11□□□□□ -0.63
UPK3B-205ENST00000490360 LINC01549A6NIU2 74 aa11.1□□□□□ -0.63
UPK3B-205ENST00000490360 SPINK1P00995 79 aa11.1□□□□□ -0.63
UPK3B-205ENST00000490360 VPREB1P12018 145 aa11.1□□□□□ -0.63
UPK3B-205ENST00000490360 HIGD2AQ9BW72 106 aa11.1□□□□□ -0.63
UPK3B-205ENST00000490360 MRPL18Q9H0U6 180 aaKnown RBP11.1□□□□□ -0.63
UPK3B-205ENST00000490360 NDUFA12Q9UI09 145 aa11.1□□□□□ -0.63
UPK3B-205ENST00000490360 SPRR4Q96PI1 79 aa11.09□□□□□ -0.63
UPK3B-205ENST00000490360 SCGB3A1Q96QR1 104 aa11.09□□□□□ -0.63
UPK3B-205ENST00000490360 H3BRM9 83 aa11.07□□□□□ -0.64
UPK3B-205ENST00000490360 SPINK8P0C7L1 97 aa11.07□□□□□ -0.64
UPK3B-205ENST00000490360 PFN2P35080 140 aa11.07□□□□□ -0.64
UPK3B-205ENST00000490360 COX17Q14061 63 aa11.07□□□□□ -0.64
UPK3B-205ENST00000490360 DAND5Q8N907 189 aa11.07□□□□□ -0.64
UPK3B-205ENST00000490360 SND1-IT1Q9HBX3 110 aa11.07□□□□□ -0.64
UPK3B-205ENST00000490360 Q8NBF4 154 aa11.06□□□□□ -0.64
UPK3B-205ENST00000490360 FAM19A2Q8N3H0 131 aa11.05□□□□□ -0.64
UPK3B-205ENST00000490360 CST9LQ9H4G1 147 aa11.05□□□□□ -0.64
UPK3B-205ENST00000490360 ERG28Q9UKR5 140 aa11.03□□□□□ -0.64
UPK3B-205ENST00000490360 RPS29P62273 56 aaKnown RBP11.02□□□□□ -0.65
UPK3B-205ENST00000490360 CFC1BP0CG36 223 aa11.01□□□□□ -0.65
UPK3B-205ENST00000490360 RAB14P61106 215 aa11.01□□□□□ -0.65
UPK3B-205ENST00000490360 PMVKQ15126 192 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms