RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 C6orf226Q5I0X4 101 aa11.95□□□□□ -0.5
EPHB4-207ENST00000489808 Q6ZRP5 223 aa11.95□□□□□ -0.5
EPHB4-207ENST00000489808 PACRGQ96M98 296 aaPredicted RBP11.95□□□□□ -0.5
EPHB4-207ENST00000489808 TOMM7Q9P0U1 55 aa11.95□□□□□ -0.5
EPHB4-207ENST00000489808 DMBT1Q9UGM3 2413 aaPredicted RBP11.95□□□□□ -0.5
EPHB4-207ENST00000489808 CBLN2Q8IUK8 224 aa11.94□□□□□ -0.5
EPHB4-207ENST00000489808 Q8IZM0 81 aa11.94□□□□□ -0.5
EPHB4-207ENST00000489808 LINC00469Q8N7U9 141 aa11.94□□□□□ -0.5
EPHB4-207ENST00000489808 HBDP02042 147 aa11.93□□□□□ -0.5
EPHB4-207ENST00000489808 IGLV5-45A0A087WSX0 123 aa11.92□□□□□ -0.5
EPHB4-207ENST00000489808 OXTP01178 125 aa11.92□□□□□ -0.5
EPHB4-207ENST00000489808 CKS1BP61024 79 aa11.92□□□□□ -0.5
EPHB4-207ENST00000489808 PMCHL1Q16048 86 aa11.92□□□□□ -0.5
EPHB4-207ENST00000489808 GAGE2EQ4V326 116 aa11.91□□□□□ -0.5
EPHB4-207ENST00000489808 PDZD11Q5EBL8 140 aa11.91□□□□□ -0.5
EPHB4-207ENST00000489808 GAGE2DQ9UEU5 116 aa11.91□□□□□ -0.5
EPHB4-207ENST00000489808 SMIM1B2RUZ4 78 aa11.9□□□□□ -0.5
EPHB4-207ENST00000489808 PRR3P79522 188 aaKnown RBP11.9□□□□□ -0.5
EPHB4-207ENST00000489808 NDUFC2-KCTD14E9PQ53 114 aa11.89□□□□□ -0.51
EPHB4-207ENST00000489808 NDUFA6P56556 154 aa11.89□□□□□ -0.51
EPHB4-207ENST00000489808 ATP5LO75964 103 aa11.88□□□□□ -0.51
EPHB4-207ENST00000489808 CHCHD1Q96BP2 118 aaKnown RBP11.87□□□□□ -0.51
EPHB4-207ENST00000489808 FAM168BA1KXE4 195 aa11.86□□□□□ -0.51
EPHB4-207ENST00000489808 F8VRH5 84 aa11.86□□□□□ -0.51
EPHB4-207ENST00000489808 IGLC3P0DOY3 106 aa11.86□□□□□ -0.51
EPHB4-207ENST00000489808 PHF5AQ7RTV0 110 aaKnown RBP11.86□□□□□ -0.51
EPHB4-207ENST00000489808 COX7B2Q8TF08 81 aa11.86□□□□□ -0.51
EPHB4-207ENST00000489808 H3BRM9 83 aa11.85□□□□□ -0.51
EPHB4-207ENST00000489808 TRGC2P03986 189 aa11.85□□□□□ -0.51
EPHB4-207ENST00000489808 SPINK8P0C7L1 97 aa11.85□□□□□ -0.51
EPHB4-207ENST00000489808 CXCL5P42830 114 aa11.85□□□□□ -0.51
EPHB4-207ENST00000489808 C9orf129Q5T035 196 aaKnown RBP11.84□□□□□ -0.51
EPHB4-207ENST00000489808 BAGE3Q86Y29 109 aa11.84□□□□□ -0.51
EPHB4-207ENST00000489808 KRTAP7-1Q8IUC3 87 aa11.83□□□□□ -0.52
EPHB4-207ENST00000489808 ZNF22P17026 224 aaPredicted RBP11.82□□□□□ -0.52
EPHB4-207ENST00000489808 SRSF9Q13242 221 aaKnown RBP eCLIP11.82□□□□□ -0.52
EPHB4-207ENST00000489808 FAM19A5Q7Z5A7 132 aaPredicted RBP11.82□□□□□ -0.52
EPHB4-207ENST00000489808 COLCA2A8K830 154 aa11.81□□□□□ -0.52
EPHB4-207ENST00000489808 PSORS1C2Q9UIG4 136 aa11.81□□□□□ -0.52
EPHB4-207ENST00000489808 SPINK6Q6UWN8 80 aa11.8□□□□□ -0.52
EPHB4-207ENST00000489808 IGLV5-39A0A0G2JS06 123 aa11.79□□□□□ -0.52
EPHB4-207ENST00000489808 C11orf86A6NJI1 115 aa11.79□□□□□ -0.52
EPHB4-207ENST00000489808 IFI27L1Q96BM0 104 aa11.79□□□□□ -0.52
EPHB4-207ENST00000489808 HSBP1O75506 76 aa11.78□□□□□ -0.52
EPHB4-207ENST00000489808 FAM19A2Q8N3H0 131 aa11.78□□□□□ -0.52
EPHB4-207ENST00000489808 XAGE1AQ9HD64 81 aa11.78□□□□□ -0.52
EPHB4-207ENST00000489808 TRAV12-1A0A0B4J245 112 aa11.77□□□□□ -0.53
EPHB4-207ENST00000489808 KRTAP11-1Q8IUC1 163 aa11.77□□□□□ -0.53
EPHB4-207ENST00000489808 CHTOPQ9Y3Y2 248 aaKnown RBP11.77□□□□□ -0.53
EPHB4-207ENST00000489808 M0QXV9 152 aa11.76□□□□□ -0.53
EPHB4-207ENST00000489808 C1orf137Q5JT78 98 aa11.76□□□□□ -0.53
EPHB4-207ENST00000489808 TMEM170BQ5T4T1 132 aa11.75□□□□□ -0.53
EPHB4-207ENST00000489808 SERTAD4-AS1Q5TG53 156 aa11.75□□□□□ -0.53
EPHB4-207ENST00000489808 SERF1AO75920 110 aa11.74□□□□□ -0.53
EPHB4-207ENST00000489808 MT1HL1P0DM35 61 aa11.74□□□□□ -0.53
EPHB4-207ENST00000489808 C22orf24Q9Y442 160 aa11.74□□□□□ -0.53
EPHB4-207ENST00000489808 LINC00310P59036 64 aa11.73□□□□□ -0.53
EPHB4-207ENST00000489808 UBE2BP63146 152 aa11.72□□□□□ -0.53
EPHB4-207ENST00000489808 LINC01600Q96MT4 127 aa11.72□□□□□ -0.53
EPHB4-207ENST00000489808 TNXBP22105 4242 aa11.72□□□□□ -0.53
EPHB4-207ENST00000489808 NUPR1O60356 82 aa11.71□□□□□ -0.53
EPHB4-207ENST00000489808 ODF1Q14990 250 aa11.71□□□□□ -0.53
EPHB4-207ENST00000489808 SCO1O75880 301 aa11.7□□□□□ -0.54
EPHB4-207ENST00000489808 LEPROTL1O95214 131 aa11.7□□□□□ -0.54
EPHB4-207ENST00000489808 IGLV7-43P04211 117 aa11.7□□□□□ -0.54
EPHB4-207ENST00000489808 LBHQ53QV2 105 aaPredicted RBP11.7□□□□□ -0.54
EPHB4-207ENST00000489808 REG3GQ6UW15 175 aa11.7□□□□□ -0.54
EPHB4-207ENST00000489808 TMEM223A0PJW6 202 aa11.69□□□□□ -0.54
EPHB4-207ENST00000489808 PLA2G2DQ9UNK4 145 aa11.69□□□□□ -0.54
EPHB4-207ENST00000489808 PFN2P35080 140 aa11.68□□□□□ -0.54
EPHB4-207ENST00000489808 TP73-AS1Q9UF72 201 aa11.68□□□□□ -0.54
EPHB4-207ENST00000489808 SFTA2Q6UW10 78 aa11.66□□□□□ -0.54
EPHB4-207ENST00000489808 MRPL55Q7Z7F7 128 aaKnown RBP11.66□□□□□ -0.54
EPHB4-207ENST00000489808 ZNF625Q96I27 306 aaPredicted RBP11.66□□□□□ -0.54
EPHB4-207ENST00000489808 ERG28Q9UKR5 140 aa11.66□□□□□ -0.54
EPHB4-207ENST00000489808 H0Y8G0 127 aa11.65□□□□□ -0.54
EPHB4-207ENST00000489808 COX17Q14061 63 aa11.65□□□□□ -0.54
EPHB4-207ENST00000489808 HSPB8Q9UJY1 196 aa11.65□□□□□ -0.54
EPHB4-207ENST00000489808 FABP4P15090 132 aa11.64□□□□□ -0.55
EPHB4-207ENST00000489808 DIRC1Q969H9 104 aa11.64□□□□□ -0.55
EPHB4-207ENST00000489808 IGLV5-37A0A075B6J1 123 aa11.63□□□□□ -0.55
EPHB4-207ENST00000489808 KRTAP10-8P60410 259 aa11.63□□□□□ -0.55
EPHB4-207ENST00000489808 LINC00167Q96N53 147 aa11.63□□□□□ -0.55
EPHB4-207ENST00000489808 HMCN2Q8NDA2 5059 aa11.62□□□□□ -0.55
EPHB4-207ENST00000489808 SND1-IT1Q9HBX3 110 aa11.62□□□□□ -0.55
EPHB4-207ENST00000489808 HIST1H2BKO60814 126 aa11.6□□□□□ -0.55
EPHB4-207ENST00000489808 HIST1H2BJP06899 126 aa11.6□□□□□ -0.55
EPHB4-207ENST00000489808 HIST1H2BOP23527 126 aa11.6□□□□□ -0.55
EPHB4-207ENST00000489808 HIST1H2BBP33778 126 aa11.6□□□□□ -0.55
EPHB4-207ENST00000489808 HIST1H2BDP58876 126 aa11.6□□□□□ -0.55
EPHB4-207ENST00000489808 HIST1H2BCP62807 126 aa11.6□□□□□ -0.55
EPHB4-207ENST00000489808 HIST2H2BEQ16778 126 aa11.6□□□□□ -0.55
EPHB4-207ENST00000489808 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.6□□□□□ -0.55
EPHB4-207ENST00000489808 HIST1H2BHQ93079 126 aa11.6□□□□□ -0.55
EPHB4-207ENST00000489808 HIST1H2BNQ99877 126 aa11.6□□□□□ -0.55
EPHB4-207ENST00000489808 HIST1H2BMQ99879 126 aa11.6□□□□□ -0.55
EPHB4-207ENST00000489808 RPL37AP8A6NKH3 93 aa11.59□□□□□ -0.55
EPHB4-207ENST00000489808 H0Y9J4 135 aa11.59□□□□□ -0.55
EPHB4-207ENST00000489808 NKAPP1Q8N9T2 125 aa11.59□□□□□ -0.55
EPHB4-207ENST00000489808 GAGE10A6NGK3 116 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms