RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 NOTCH1P46531 2555 aa12.97□□□□□ -0.33
POLR2J3-205ENST00000489144 NXPH4O95158 308 aa12.97□□□□□ -0.33
POLR2J3-205ENST00000489144 IL17DQ8TAD2 202 aa12.97□□□□□ -0.33
POLR2J3-205ENST00000489144 SUMO4Q6EEV6 95 aa12.97□□□□□ -0.33
POLR2J3-205ENST00000489144 C11orf72Q8NBR9 251 aa12.96□□□□□ -0.34
POLR2J3-205ENST00000489144 Q9UF83 564 aa12.96□□□□□ -0.34
POLR2J3-205ENST00000489144 BAALC-AS2P0C853 105 aa12.95□□□□□ -0.34
POLR2J3-205ENST00000489144 PPP1R17O96001 155 aa12.94□□□□□ -0.34
POLR2J3-205ENST00000489144 FAM222AQ5U5X8 452 aa12.94□□□□□ -0.34
POLR2J3-205ENST00000489144 IGHV3-64A0A075B6Q5 118 aa12.93□□□□□ -0.34
POLR2J3-205ENST00000489144 MRPS36P82909 103 aaKnown RBP12.93□□□□□ -0.34
POLR2J3-205ENST00000489144 C22orf24Q9Y442 160 aa12.93□□□□□ -0.34
POLR2J3-205ENST00000489144 COX7A2LO14548 114 aa12.93□□□□□ -0.34
POLR2J3-205ENST00000489144 IGHV3-53P01767 116 aa12.93□□□□□ -0.34
POLR2J3-205ENST00000489144 MIAQ16674 131 aa12.92□□□□□ -0.34
POLR2J3-205ENST00000489144 ADAMTSL4-AS1Q5T5F5 129 aa12.92□□□□□ -0.34
POLR2J3-205ENST00000489144 RPL39P62891 51 aaKnown RBP12.92□□□□□ -0.34
POLR2J3-205ENST00000489144 Q6ZSN1 163 aa12.92□□□□□ -0.34
POLR2J3-205ENST00000489144 TRGV1A0A0A0MS02 117 aa12.91□□□□□ -0.34
POLR2J3-205ENST00000489144 UBE2D4Q9Y2X8 147 aa12.91□□□□□ -0.34
POLR2J3-205ENST00000489144 XCL1P47992 114 aa12.91□□□□□ -0.34
POLR2J3-205ENST00000489144 FAM19A1Q7Z5A9 133 aa12.91□□□□□ -0.34
POLR2J3-205ENST00000489144 NOP10Q9NPE3 64 aaKnown RBP12.91□□□□□ -0.34
POLR2J3-205ENST00000489144 A0A0U1RRA0 63 aa12.9□□□□□ -0.34
POLR2J3-205ENST00000489144 Q6ZTI0 123 aa12.9□□□□□ -0.34
POLR2J3-205ENST00000489144 C20orf197Q8N268 126 aa12.9□□□□□ -0.34
POLR2J3-205ENST00000489144 CSNK1G2-AS1Q8NCQ2 148 aa12.9□□□□□ -0.34
POLR2J3-205ENST00000489144 GHRHP01286 108 aa12.89□□□□□ -0.35
POLR2J3-205ENST00000489144 CMC4P56277 68 aaPredicted RBP12.89□□□□□ -0.35
POLR2J3-205ENST00000489144 CIRBPQ14011 172 aaKnown RBP12.89□□□□□ -0.35
POLR2J3-205ENST00000489144 H7BZZ5 65 aa12.88□□□□□ -0.35
POLR2J3-205ENST00000489144 COPS9Q8WXC6 57 aa12.88□□□□□ -0.35
POLR2J3-205ENST00000489144 DNAL4O96015 105 aa12.88□□□□□ -0.35
POLR2J3-205ENST00000489144 DEFB4AO15263 64 aa12.87□□□□□ -0.35
POLR2J3-205ENST00000489144 WFDC9Q8NEX5 89 aa12.87□□□□□ -0.35
POLR2J3-205ENST00000489144 IGHV3-30-3P0DP02 117 aa12.87□□□□□ -0.35
POLR2J3-205ENST00000489144 DEFB135Q30KP9 77 aa12.87□□□□□ -0.35
POLR2J3-205ENST00000489144 M0QY20 66 aa12.86□□□□□ -0.35
POLR2J3-205ENST00000489144 NBEAL1Q6ZS30 2694 aa12.86□□□□□ -0.35
POLR2J3-205ENST00000489144 KRTAP10-11P60412 298 aa12.86□□□□□ -0.35
POLR2J3-205ENST00000489144 LYPD5Q6UWN5 251 aa12.86□□□□□ -0.35
POLR2J3-205ENST00000489144 PLAC8L1A1L4L8 177 aa12.85□□□□□ -0.35
POLR2J3-205ENST00000489144 LINC00846Q9NV44 126 aa12.85□□□□□ -0.35
POLR2J3-205ENST00000489144 POLR2KP53803 58 aaKnown RBP12.84□□□□□ -0.35
POLR2J3-205ENST00000489144 PMAIP1Q13794 54 aa12.84□□□□□ -0.35
POLR2J3-205ENST00000489144 VSIG2Q96IQ7 327 aa12.84□□□□□ -0.35
POLR2J3-205ENST00000489144 VCYO14598 125 aa12.83□□□□□ -0.36
POLR2J3-205ENST00000489144 PRB2P02812 416 aaPredicted RBP12.82□□□□□ -0.36
POLR2J3-205ENST00000489144 LINC00467Q9BRT7 94 aa12.82□□□□□ -0.36
POLR2J3-205ENST00000489144 LINC00474Q9P2X8 69 aa12.82□□□□□ -0.36
POLR2J3-205ENST00000489144 IGHV3-38A0A0C4DH36 116 aa12.82□□□□□ -0.36
POLR2J3-205ENST00000489144 NDUFA12Q9UI09 145 aa12.82□□□□□ -0.36
POLR2J3-205ENST00000489144 MGAM2Q2M2H8 2515 aa12.82□□□□□ -0.36
POLR2J3-205ENST00000489144 IGHV4-30-4P0DP06 118 aa12.81□□□□□ -0.36
POLR2J3-205ENST00000489144 A0A0J9YXV3 536 aa12.8□□□□□ -0.36
POLR2J3-205ENST00000489144 DEFB130BP0DP73 79 aa12.8□□□□□ -0.36
POLR2J3-205ENST00000489144 DEFB130AP0DP74 79 aa12.8□□□□□ -0.36
POLR2J3-205ENST00000489144 OPRPNQ99935 248 aaPredicted RBP12.8□□□□□ -0.36
POLR2J3-205ENST00000489144 RPL28P46779 137 aaKnown RBP12.79□□□□□ -0.36
POLR2J3-205ENST00000489144 TRGV2A0A075B6R0 118 aa12.79□□□□□ -0.36
POLR2J3-205ENST00000489144 CCKP06307 115 aa12.79□□□□□ -0.36
POLR2J3-205ENST00000489144 C16orf74Q96GX8 76 aa12.78□□□□□ -0.36
POLR2J3-205ENST00000489144 TRBV7-6A0A0J9YX20 115 aa12.78□□□□□ -0.36
POLR2J3-205ENST00000489144 TIMM17BO60830 172 aa12.78□□□□□ -0.36
POLR2J3-205ENST00000489144 X6R8D5 127 aa12.78□□□□□ -0.36
POLR2J3-205ENST00000489144 SS18Q15532 418 aa12.77□□□□□ -0.36
POLR2J3-205ENST00000489144 RETNQ9HD89 108 aa12.77□□□□□ -0.36
POLR2J3-205ENST00000489144 TRAV23DV6A0A075B6W5 121 aa12.77□□□□□ -0.37
POLR2J3-205ENST00000489144 TENM3Q9P273 2699 aa12.77□□□□□ -0.37
POLR2J3-205ENST00000489144 TRBV27A0A0K0K1C4 114 aa12.76□□□□□ -0.37
POLR2J3-205ENST00000489144 MDFIQ99750 246 aa12.76□□□□□ -0.37
POLR2J3-205ENST00000489144 IGHV1-58A0A0C4DH39 117 aa12.76□□□□□ -0.37
POLR2J3-205ENST00000489144 LOC100131303A0A0U1RQF7 123 aa12.76□□□□□ -0.37
POLR2J3-205ENST00000489144 KLKP1Q107X0 134 aa12.76□□□□□ -0.37
POLR2J3-205ENST00000489144 C14orf132Q9NPU4 83 aa12.76□□□□□ -0.37
POLR2J3-205ENST00000489144 FAM218AQ96MZ4 157 aa12.75□□□□□ -0.37
POLR2J3-205ENST00000489144 RBM3P98179 157 aaKnown RBP12.75□□□□□ -0.37
POLR2J3-205ENST00000489144 CD164Q04900 197 aa12.73□□□□□ -0.37
POLR2J3-205ENST00000489144 OBSCN-AS1Q96MR7 158 aa12.73□□□□□ -0.37
POLR2J3-205ENST00000489144 TRBV6-5A0A0K0K1A5 114 aa12.72□□□□□ -0.37
POLR2J3-205ENST00000489144 Q9HAA7 133 aa12.72□□□□□ -0.37
POLR2J3-205ENST00000489144 ATP5EP2Q5VTU8 51 aa12.72□□□□□ -0.37
POLR2J3-205ENST00000489144 DNAH3Q8TD57 4116 aa12.72□□□□□ -0.37
POLR2J3-205ENST00000489144 TRAV7A0A075B6U4 112 aa12.71□□□□□ -0.37
POLR2J3-205ENST00000489144 BCE1O60756 84 aa12.71□□□□□ -0.37
POLR2J3-205ENST00000489144 APOC4P55056 127 aa12.71□□□□□ -0.37
POLR2J3-205ENST00000489144 IGHV4-28A0A0C4DH34 117 aa12.7□□□□□ -0.38
POLR2J3-205ENST00000489144 S100A7L2Q5SY68 101 aa12.7□□□□□ -0.38
POLR2J3-205ENST00000489144 RNASE13Q5GAN3 156 aaKnown RBP12.7□□□□□ -0.38
POLR2J3-205ENST00000489144 IGLV4-3A0A075B6K6 122 aa12.69□□□□□ -0.38
POLR2J3-205ENST00000489144 TRGV4A0A0C4DH28 118 aa12.69□□□□□ -0.38
POLR2J3-205ENST00000489144 ZNF561-AS1K7EIQ3 104 aa12.69□□□□□ -0.38
POLR2J3-205ENST00000489144 C9orf129Q5T035 196 aaKnown RBP12.69□□□□□ -0.38
POLR2J3-205ENST00000489144 PRR15Q8IV56 129 aa12.69□□□□□ -0.38
POLR2J3-205ENST00000489144 CELA1Q9UNI1 258 aa12.69□□□□□ -0.38
POLR2J3-205ENST00000489144 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.69□□□□□ -0.38
POLR2J3-205ENST00000489144 IGKV2-29A2NJV5 120 aaPredicted RBP12.69□□□□□ -0.38
POLR2J3-205ENST00000489144 ATP5EP56381 51 aaPredicted RBP12.69□□□□□ -0.38
POLR2J3-205ENST00000489144 PIK3CD-AS1Q5SR53 167 aa12.69□□□□□ -0.38
POLR2J3-205ENST00000489144 LINC00308Q8TCZ7 52 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms