RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 LINC00587B1AMM8 73 aa5.39□□□□□ -1.55
TRAPPC12-221ENST00000489032 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC12-221ENST00000489032 INAFM2P0DMQ5 153 aa5.39□□□□□ -1.55
TRAPPC12-221ENST00000489032 POLR2KP53803 58 aaKnown RBP5.39□□□□□ -1.55
TRAPPC12-221ENST00000489032 Q6ZN92 141 aa5.39□□□□□ -1.55
TRAPPC12-221ENST00000489032 TOMM6Q96B49 74 aa5.39□□□□□ -1.55
TRAPPC12-221ENST00000489032 TMEM243Q9BU79 118 aa5.39□□□□□ -1.55
TRAPPC12-221ENST00000489032 UQCR10Q9UDW1 63 aa5.39□□□□□ -1.55
TRAPPC12-221ENST00000489032 EPM2AB3EWF7 344 aa5.38□□□□□ -1.55
TRAPPC12-221ENST00000489032 MRPL52Q86TS9 123 aaKnown RBP5.38□□□□□ -1.55
TRAPPC12-221ENST00000489032 ATOH7Q8N100 152 aa5.38□□□□□ -1.55
TRAPPC12-221ENST00000489032 SCGB3A1Q96QR1 104 aa5.38□□□□□ -1.55
TRAPPC12-221ENST00000489032 CYSLTR1Q9Y271 337 aa5.38□□□□□ -1.55
TRAPPC12-221ENST00000489032 TRAV8-3A0A0A6YYJ7 113 aa5.37□□□□□ -1.55
TRAPPC12-221ENST00000489032 TRAV12-1A0A0B4J245 112 aa5.37□□□□□ -1.55
TRAPPC12-221ENST00000489032 IBA57-AS1B1ANH7 110 aa5.37□□□□□ -1.55
TRAPPC12-221ENST00000489032 CRPP02741 224 aa5.37□□□□□ -1.55
TRAPPC12-221ENST00000489032 IGLC3P0DOY3 106 aa5.37□□□□□ -1.55
TRAPPC12-221ENST00000489032 C2orf66Q6UXQ4 117 aa5.37□□□□□ -1.55
TRAPPC12-221ENST00000489032 NTM-AS1Q6ZSK4 140 aa5.37□□□□□ -1.55
TRAPPC12-221ENST00000489032 ERASQ7Z444 233 aa5.37□□□□□ -1.55
TRAPPC12-221ENST00000489032 RMI2Q96E14 147 aa5.37□□□□□ -1.55
TRAPPC12-221ENST00000489032 TMEM141Q96I45 108 aa5.37□□□□□ -1.55
TRAPPC12-221ENST00000489032 FAM218AQ96MZ4 157 aa5.37□□□□□ -1.55
TRAPPC12-221ENST00000489032 PMCHL2Q9BQD1 86 aa5.37□□□□□ -1.55
TRAPPC12-221ENST00000489032 PSCAO43653 123 aa5.36□□□□□ -1.55
TRAPPC12-221ENST00000489032 ANGP03950 147 aaKnown RBP5.36□□□□□ -1.55
TRAPPC12-221ENST00000489032 PLNP26678 52 aa5.36□□□□□ -1.55
TRAPPC12-221ENST00000489032 SMAGPQ0VAQ4 97 aa5.36□□□□□ -1.55
TRAPPC12-221ENST00000489032 AMMECR1LQ6DCA0 310 aa5.36□□□□□ -1.55
TRAPPC12-221ENST00000489032 Q9HAA7 133 aa5.36□□□□□ -1.55
TRAPPC12-221ENST00000489032 KLK12Q9UKR0 248 aa5.36□□□□□ -1.55
TRAPPC12-221ENST00000489032 DPM2O94777 84 aa5.35□□□□□ -1.55
TRAPPC12-221ENST00000489032 IGKCP01834 107 aa5.35□□□□□ -1.55
TRAPPC12-221ENST00000489032 HNRNPA3P51991 378 aaKnown RBP5.35□□□□□ -1.55
TRAPPC12-221ENST00000489032 MPV17L2Q567V2 206 aa5.35□□□□□ -1.55
TRAPPC12-221ENST00000489032 DEFB104AQ8WTQ1 72 aa5.35□□□□□ -1.55
TRAPPC12-221ENST00000489032 UBE2WQ96B02 151 aa5.35□□□□□ -1.55
TRAPPC12-221ENST00000489032 TMEM101Q96IK0 257 aa5.35□□□□□ -1.55
TRAPPC12-221ENST00000489032 TIMM17AQ99595 171 aa5.35□□□□□ -1.55
TRAPPC12-221ENST00000489032 M0R143 59 aa5.34□□□□□ -1.55
TRAPPC12-221ENST00000489032 RBX1P62877 108 aa5.34□□□□□ -1.55
TRAPPC12-221ENST00000489032 MAJINQ3KP22 176 aa5.34□□□□□ -1.55
TRAPPC12-221ENST00000489032 SLC25A34Q6PIV7 304 aa5.34□□□□□ -1.55
TRAPPC12-221ENST00000489032 Q6ZVQ6 151 aa5.34□□□□□ -1.55
TRAPPC12-221ENST00000489032 C14orf144Q96I85 54 aa5.34□□□□□ -1.55
TRAPPC12-221ENST00000489032 SRRM2Q9UQ35 2752 aaKnown RBP5.33□□□□□ -1.56
TRAPPC12-221ENST00000489032 IGKV2D-24A0A075B6R9 120 aa5.33□□□□□ -1.56
TRAPPC12-221ENST00000489032 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.33□□□□□ -1.56
TRAPPC12-221ENST00000489032 IGKV2-29A2NJV5 120 aaPredicted RBP5.33□□□□□ -1.56
TRAPPC12-221ENST00000489032 IGIPA6NJ69 53 aa5.33□□□□□ -1.56
TRAPPC12-221ENST00000489032 F8VRH5 84 aa5.33□□□□□ -1.56
TRAPPC12-221ENST00000489032 FGF6P10767 208 aa5.33□□□□□ -1.56
TRAPPC12-221ENST00000489032 ZNF25P17030 456 aaPredicted RBP5.33□□□□□ -1.56
TRAPPC12-221ENST00000489032 PMVKQ15126 192 aa5.33□□□□□ -1.56
TRAPPC12-221ENST00000489032 MIAQ16674 131 aa5.33□□□□□ -1.56
TRAPPC12-221ENST00000489032 C20orf203Q8NBC4 194 aa5.33□□□□□ -1.56
TRAPPC12-221ENST00000489032 OR5A1Q8NGJ0 315 aa5.33□□□□□ -1.56
TRAPPC12-221ENST00000489032 CHTOPQ9Y3Y2 248 aaKnown RBP5.33□□□□□ -1.56
TRAPPC12-221ENST00000489032 APOBP04114 4563 aaKnown RBP5.33□□□□□ -1.56
TRAPPC12-221ENST00000489032 COX8AP10176 69 aa5.32□□□□□ -1.56
TRAPPC12-221ENST00000489032 REG3AQ06141 175 aa5.32□□□□□ -1.56
TRAPPC12-221ENST00000489032 LINC00269Q8N2A0 174 aa5.32□□□□□ -1.56
TRAPPC12-221ENST00000489032 Q8NBF4 154 aa5.32□□□□□ -1.56
TRAPPC12-221ENST00000489032 BAALCQ8WXS3 180 aa5.32□□□□□ -1.56
TRAPPC12-221ENST00000489032 MRPL35Q9NZE8 188 aaKnown RBP5.32□□□□□ -1.56
TRAPPC12-221ENST00000489032 TRAV8-4A0A0B4J246 113 aa5.31□□□□□ -1.56
TRAPPC12-221ENST00000489032 DLEU1O43261 78 aa5.31□□□□□ -1.56
TRAPPC12-221ENST00000489032 CTAG1AP78358 180 aa5.31□□□□□ -1.56
TRAPPC12-221ENST00000489032 CLPSL2Q6UWE3 100 aa5.31□□□□□ -1.56
TRAPPC12-221ENST00000489032 Q6ZRN7 208 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC12-221ENST00000489032 LRP1BQ9NZR2 4599 aa5.31□□□□□ -1.56
TRAPPC12-221ENST00000489032 IGLV4-60A0A075B6I1 120 aa5.3□□□□□ -1.56
TRAPPC12-221ENST00000489032 HERVK_113P61574 105 aa5.3□□□□□ -1.56
TRAPPC12-221ENST00000489032 RPL39P62891 51 aaKnown RBP5.3□□□□□ -1.56
TRAPPC12-221ENST00000489032 ENHOQ6UWT2 76 aa5.3□□□□□ -1.56
TRAPPC12-221ENST00000489032 VCX2Q9H322 139 aa5.3□□□□□ -1.56
TRAPPC12-221ENST00000489032 CST9LQ9H4G1 147 aa5.3□□□□□ -1.56
TRAPPC12-221ENST00000489032 SPANXA1Q9NS26 97 aa5.3□□□□□ -1.56
TRAPPC12-221ENST00000489032 PRR34Q9NV39 138 aa5.3□□□□□ -1.56
TRAPPC12-221ENST00000489032 IGKV3OR2-268A0A0C4DH90 116 aa5.29□□□□□ -1.56
TRAPPC12-221ENST00000489032 NMUP48645 174 aa5.29□□□□□ -1.56
TRAPPC12-221ENST00000489032 BOD1L2Q8IYS8 172 aa5.29□□□□□ -1.56
TRAPPC12-221ENST00000489032 C2orf88Q9BSF0 95 aa5.29□□□□□ -1.56
TRAPPC12-221ENST00000489032 TIMM21Q9BVV7 248 aa5.29□□□□□ -1.56
TRAPPC12-221ENST00000489032 SNHG12Q9BXW3 62 aa5.29□□□□□ -1.56
TRAPPC12-221ENST00000489032 CSDC2Q9Y534 153 aaKnown RBP5.29□□□□□ -1.56
TRAPPC12-221ENST00000489032 MYCBP2O75592 4640 aa5.28□□□□□ -1.56
TRAPPC12-221ENST00000489032 A0A087WTM6 91 aa5.28□□□□□ -1.56
TRAPPC12-221ENST00000489032 SS18Q15532 418 aa5.28□□□□□ -1.56
TRAPPC12-221ENST00000489032 COL5A1-AS1Q5SY13 56 aa5.28□□□□□ -1.56
TRAPPC12-221ENST00000489032 Q5VSD8 79 aa5.28□□□□□ -1.56
TRAPPC12-221ENST00000489032 CDC42SE2Q9NRR3 84 aa5.28□□□□□ -1.56
TRAPPC12-221ENST00000489032 UBE2D4Q9Y2X8 147 aa5.28□□□□□ -1.56
TRAPPC12-221ENST00000489032 IGLV10-54A0A075B6I4 117 aa5.27□□□□□ -1.57
TRAPPC12-221ENST00000489032 IGLV4-3A0A075B6K6 122 aa5.27□□□□□ -1.57
TRAPPC12-221ENST00000489032 C11orf86A6NJI1 115 aa5.27□□□□□ -1.57
TRAPPC12-221ENST00000489032 CCL25O15444 150 aa5.27□□□□□ -1.57
TRAPPC12-221ENST00000489032 MRPS36P82909 103 aaKnown RBP5.27□□□□□ -1.57
TRAPPC12-221ENST00000489032 BATFQ16520 125 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms