RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 NDUFA1O15239 70 aa10.49□□□□□ -0.73
CLDN11-208ENST00000488989 COX8AP10176 69 aa10.49□□□□□ -0.73
CLDN11-208ENST00000488989 SFTA2Q6UW10 78 aa10.49□□□□□ -0.73
CLDN11-208ENST00000488989 PCP2Q8IVA1 136 aa10.49□□□□□ -0.73
CLDN11-208ENST00000488989 NDUFA12Q9UI09 145 aa10.49□□□□□ -0.73
CLDN11-208ENST00000488989 DLEU1O43261 78 aa10.48□□□□□ -0.73
CLDN11-208ENST00000488989 BOD1L2Q8IYS8 172 aa10.48□□□□□ -0.73
CLDN11-208ENST00000488989 LINC00526Q96FQ7 95 aa10.48□□□□□ -0.73
CLDN11-208ENST00000488989 TTTY13Q9BZ97 58 aa10.48□□□□□ -0.73
CLDN11-208ENST00000488989 MYMXA0A1B0GTQ4 84 aa10.47□□□□□ -0.73
CLDN11-208ENST00000488989 ZNF815PA8K554 130 aa10.46□□□□□ -0.73
CLDN11-208ENST00000488989 CKS1BP61024 79 aa10.46□□□□□ -0.73
CLDN11-208ENST00000488989 HERV-K104P63124 156 aa10.46□□□□□ -0.73
CLDN11-208ENST00000488989 C2orf82Q6UX34 121 aa10.46□□□□□ -0.73
CLDN11-208ENST00000488989 HECTD4Q9Y4D8 3996 aa10.46□□□□□ -0.73
CLDN11-208ENST00000488989 SLPIP03973 132 aa10.45□□□□□ -0.74
CLDN11-208ENST00000488989 TNP2Q05952 138 aa10.45□□□□□ -0.74
CLDN11-208ENST00000488989 Q8N814 137 aa10.45□□□□□ -0.74
CLDN11-208ENST00000488989 C14orf144Q96I85 54 aa10.45□□□□□ -0.74
CLDN11-208ENST00000488989 CAMK2N2Q96S95 79 aa10.45□□□□□ -0.74
CLDN11-208ENST00000488989 CNBPP62633 177 aaKnown RBP10.44□□□□□ -0.74
CLDN11-208ENST00000488989 SYCNQ0VAF6 134 aa10.44□□□□□ -0.74
CLDN11-208ENST00000488989 C10orf25Q5T742 122 aa10.44□□□□□ -0.74
CLDN11-208ENST00000488989 UNQ6190/PRO20217Q6UXQ8 127 aa10.44□□□□□ -0.74
CLDN11-208ENST00000488989 TRBV30A0A0K0K1B3 111 aa10.43□□□□□ -0.74
CLDN11-208ENST00000488989 RNF151Q2KHN1 245 aa10.43□□□□□ -0.74
CLDN11-208ENST00000488989 SLC25A34Q6PIV7 304 aa10.43□□□□□ -0.74
CLDN11-208ENST00000488989 Q6ZRU5 148 aa10.43□□□□□ -0.74
CLDN11-208ENST00000488989 A0A0J9YXY3 114 aa10.42□□□□□ -0.74
CLDN11-208ENST00000488989 C6orf48Q9UBA6 75 aa10.42□□□□□ -0.74
CLDN11-208ENST00000488989 LINC00336Q6ZUF6 198 aa10.41□□□□□ -0.74
CLDN11-208ENST00000488989 CARD19Q96LW7 228 aa10.41□□□□□ -0.74
CLDN11-208ENST00000488989 UQCR10Q9UDW1 63 aa10.41□□□□□ -0.74
CLDN11-208ENST00000488989 EREGO14944 169 aa10.4□□□□□ -0.74
CLDN11-208ENST00000488989 TIMM17BO60830 172 aa10.4□□□□□ -0.74
CLDN11-208ENST00000488989 PRO1933Q9H354 126 aa10.4□□□□□ -0.74
CLDN11-208ENST00000488989 TP73-AS1Q9UF72 201 aa10.4□□□□□ -0.74
CLDN11-208ENST00000488989 DNAH5Q8TE73 4624 aa10.39□□□□□ -0.75
CLDN11-208ENST00000488989 LINC00587B1AMM8 73 aa10.39□□□□□ -0.75
CLDN11-208ENST00000488989 COX17Q14061 63 aa10.39□□□□□ -0.75
CLDN11-208ENST00000488989 ERG28Q9UKR5 140 aa10.39□□□□□ -0.75
CLDN11-208ENST00000488989 RYR3Q15413 4870 aa10.39□□□□□ -0.75
CLDN11-208ENST00000488989 PKD1P98161 4303 aa10.38□□□□□ -0.75
CLDN11-208ENST00000488989 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.38□□□□□ -0.75
CLDN11-208ENST00000488989 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.38□□□□□ -0.75
CLDN11-208ENST00000488989 C2orf91Q6ZV80 131 aa10.38□□□□□ -0.75
CLDN11-208ENST00000488989 LITAFQ99732 161 aa10.38□□□□□ -0.75
CLDN11-208ENST00000488989 MIEN1Q9BRT3 115 aa10.38□□□□□ -0.75
CLDN11-208ENST00000488989 HIGD1BQ9P298 99 aa10.38□□□□□ -0.75
CLDN11-208ENST00000488989 TSTD3H0UI37 97 aa10.37□□□□□ -0.75
CLDN11-208ENST00000488989 TLX1NBP0CAT3 122 aa10.37□□□□□ -0.75
CLDN11-208ENST00000488989 C9orf116Q5BN46 136 aaPredicted RBP10.37□□□□□ -0.75
CLDN11-208ENST00000488989 MEIG1Q5JSS6 88 aa10.37□□□□□ -0.75
CLDN11-208ENST00000488989 SCGB1D4Q6XE38 83 aa10.37□□□□□ -0.75
CLDN11-208ENST00000488989 C9orf163Q8N9P6 203 aa10.37□□□□□ -0.75
CLDN11-208ENST00000488989 SMIM13P0DJ93 91 aa10.36□□□□□ -0.75
CLDN11-208ENST00000488989 CIRBPQ14011 172 aaKnown RBP10.35□□□□□ -0.75
CLDN11-208ENST00000488989 SPANXB1Q9NS25 103 aaPredicted RBP10.35□□□□□ -0.75
CLDN11-208ENST00000488989 TMEM238C9JI98 176 aa10.34□□□□□ -0.75
CLDN11-208ENST00000488989 ADAMTSL4-AS1Q5T5F5 129 aa10.34□□□□□ -0.75
CLDN11-208ENST00000488989 SPANXDQ9BXN6 97 aa10.34□□□□□ -0.75
CLDN11-208ENST00000488989 SPANXCQ9NY87 97 aa10.34□□□□□ -0.75
CLDN11-208ENST00000488989 NDUFC2-KCTD14E9PQ53 114 aa10.33□□□□□ -0.76
CLDN11-208ENST00000488989 PFN2P35080 140 aa10.33□□□□□ -0.76
CLDN11-208ENST00000488989 LINC00158P58513 81 aa10.33□□□□□ -0.76
CLDN11-208ENST00000488989 DNAH8Q96JB1 4490 aa10.33□□□□□ -0.76
CLDN11-208ENST00000488989 Q6ZVH6 145 aa10.32□□□□□ -0.76
CLDN11-208ENST00000488989 A0A0U1RRA0 63 aa10.31□□□□□ -0.76
CLDN11-208ENST00000488989 LOC107984640A0A0U1RRK4 108 aa10.31□□□□□ -0.76
CLDN11-208ENST00000488989 HNRNPA3P51991 378 aaKnown RBP10.31□□□□□ -0.76
CLDN11-208ENST00000488989 PTTG1IPP53801 180 aa10.31□□□□□ -0.76
CLDN11-208ENST00000488989 MIR7-3HGQ8N6C7 128 aa10.31□□□□□ -0.76
CLDN11-208ENST00000488989 PGPEP1Q9NXJ5 209 aa10.31□□□□□ -0.76
CLDN11-208ENST00000488989 PKIGQ9Y2B9 76 aa10.31□□□□□ -0.76
CLDN11-208ENST00000488989 IGLV5-52A0A0A0MRZ9 124 aa10.3□□□□□ -0.76
CLDN11-208ENST00000488989 A0A1B0GVY2 172 aa10.3□□□□□ -0.76
CLDN11-208ENST00000488989 KRTAP10-2P60368 255 aa10.3□□□□□ -0.76
CLDN11-208ENST00000488989 Q6ZRP5 223 aa10.3□□□□□ -0.76
CLDN11-208ENST00000488989 PPDPFQ9H3Y8 114 aa10.3□□□□□ -0.76
CLDN11-208ENST00000488989 LOC107984156A0A0G2JMH3 177 aa10.29□□□□□ -0.76
CLDN11-208ENST00000488989 TAL2Q16559 108 aa10.29□□□□□ -0.76
CLDN11-208ENST00000488989 SDIM1Q6ZPB5 146 aa10.29□□□□□ -0.76
CLDN11-208ENST00000488989 ARL17AQ8IVW1 177 aa10.29□□□□□ -0.76
CLDN11-208ENST00000488989 IFITM1P13164 125 aa10.28□□□□□ -0.76
CLDN11-208ENST00000488989 DAND5Q8N907 189 aa10.28□□□□□ -0.76
CLDN11-208ENST00000488989 SND1-IT1Q9HBX3 110 aa10.28□□□□□ -0.76
CLDN11-208ENST00000488989 FUSP35637 526 aaKnown RBP eCLIP10.27□□□□□ -0.77
CLDN11-208ENST00000488989 SRSF9Q13242 221 aaKnown RBP eCLIP10.27□□□□□ -0.77
CLDN11-208ENST00000488989 LINC00308Q8TCZ7 52 aa10.27□□□□□ -0.77
CLDN11-208ENST00000488989 C16orf90A8MZG2 172 aa10.26□□□□□ -0.77
CLDN11-208ENST00000488989 DDTP30046 118 aa10.26□□□□□ -0.77
CLDN11-208ENST00000488989 RPL18AQ02543 176 aaKnown RBP10.26□□□□□ -0.77
CLDN11-208ENST00000488989 HSD52Q0P140 79 aa10.26□□□□□ -0.77
CLDN11-208ENST00000488989 SOSTDC1Q6X4U4 206 aa10.26□□□□□ -0.77
CLDN11-208ENST00000488989 DYNC1H1Q14204 4646 aaKnown RBP10.25□□□□□ -0.77
CLDN11-208ENST00000488989 GCSHP23434 173 aa10.25□□□□□ -0.77
CLDN11-208ENST00000488989 LINC01620Q4KN68 170 aa10.25□□□□□ -0.77
CLDN11-208ENST00000488989 COPS9Q8WXC6 57 aa10.25□□□□□ -0.77
CLDN11-208ENST00000488989 HIST1H4GQ99525 98 aa10.25□□□□□ -0.77
CLDN11-208ENST00000488989 A0A096LNI7 61 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms