RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 COA6Q5JTJ3 125 aaKnown RBP8.66□□□□□ -1.02
SPTLC1-207ENST00000488921 FAM19A2Q8N3H0 131 aa8.66□□□□□ -1.02
SPTLC1-207ENST00000488921 FAM104AQ969W3 186 aa8.66□□□□□ -1.02
SPTLC1-207ENST00000488921 IGLV4-3A0A075B6K6 122 aa8.65□□□□□ -1.02
SPTLC1-207ENST00000488921 RPL18AQ02543 176 aaKnown RBP8.65□□□□□ -1.02
SPTLC1-207ENST00000488921 TIMM17AQ99595 171 aa8.65□□□□□ -1.02
SPTLC1-207ENST00000488921 C2orf88Q9BSF0 95 aa8.65□□□□□ -1.02
SPTLC1-207ENST00000488921 VCX2Q9H322 139 aa8.65□□□□□ -1.02
SPTLC1-207ENST00000488921 IGIPA6NJ69 53 aa8.64□□□□□ -1.03
SPTLC1-207ENST00000488921 NDUFA1O15239 70 aa8.64□□□□□ -1.03
SPTLC1-207ENST00000488921 NUPR1O60356 82 aa8.64□□□□□ -1.03
SPTLC1-207ENST00000488921 LEPROTL1O95214 131 aa8.64□□□□□ -1.03
SPTLC1-207ENST00000488921 TEX43Q6ZNM6 134 aa8.64□□□□□ -1.03
SPTLC1-207ENST00000488921 MRPL35Q9NZE8 188 aaKnown RBP8.64□□□□□ -1.03
SPTLC1-207ENST00000488921 HSPB8Q9UJY1 196 aa8.64□□□□□ -1.03
SPTLC1-207ENST00000488921 S100A2P29034 98 aa8.63□□□□□ -1.03
SPTLC1-207ENST00000488921 LINC00310P59036 64 aa8.63□□□□□ -1.03
SPTLC1-207ENST00000488921 PDZD11Q5EBL8 140 aa8.63□□□□□ -1.03
SPTLC1-207ENST00000488921 A0A087WZ39 114 aa8.62□□□□□ -1.03
SPTLC1-207ENST00000488921 A0A096LNJ9 63 aa8.62□□□□□ -1.03
SPTLC1-207ENST00000488921 FABP4P15090 132 aa8.62□□□□□ -1.03
SPTLC1-207ENST00000488921 Q6ZRP5 223 aa8.62□□□□□ -1.03
SPTLC1-207ENST00000488921 LINC00242Q5T6M2 205 aa8.61□□□□□ -1.03
SPTLC1-207ENST00000488921 IFI27L1Q96BM0 104 aa8.61□□□□□ -1.03
SPTLC1-207ENST00000488921 TMA7Q9Y2S6 64 aaKnown RBP8.61□□□□□ -1.03
SPTLC1-207ENST00000488921 UBE2D1P51668 147 aa8.6□□□□□ -1.03
SPTLC1-207ENST00000488921 SNRPEP62304 92 aaKnown RBP8.6□□□□□ -1.03
SPTLC1-207ENST00000488921 PMVKQ15126 192 aa8.6□□□□□ -1.03
SPTLC1-207ENST00000488921 LINC01561Q8N1V8 128 aa8.6□□□□□ -1.03
SPTLC1-207ENST00000488921 PACRGQ96M98 296 aaPredicted RBP8.6□□□□□ -1.03
SPTLC1-207ENST00000488921 MAP1LC3CQ9BXW4 147 aa8.6□□□□□ -1.03
SPTLC1-207ENST00000488921 A0A0J9YXV3 536 aa8.59□□□□□ -1.03
SPTLC1-207ENST00000488921 TLX1NBP0CAT3 122 aa8.59□□□□□ -1.03
SPTLC1-207ENST00000488921 C9orf116Q5BN46 136 aaPredicted RBP8.59□□□□□ -1.03
SPTLC1-207ENST00000488921 SPINK6Q6UWN8 80 aa8.59□□□□□ -1.03
SPTLC1-207ENST00000488921 AMELXQ99217 191 aa8.59□□□□□ -1.03
SPTLC1-207ENST00000488921 A0A1W2PNN7 141 aa8.58□□□□□ -1.04
SPTLC1-207ENST00000488921 MT1HL1P0DM35 61 aa8.58□□□□□ -1.04
SPTLC1-207ENST00000488921 SEC11AP67812 179 aa8.58□□□□□ -1.04
SPTLC1-207ENST00000488921 REG3GQ6UW15 175 aa8.58□□□□□ -1.04
SPTLC1-207ENST00000488921 CST9LQ9H4G1 147 aa8.58□□□□□ -1.04
SPTLC1-207ENST00000488921 PLA2G2DQ9UNK4 145 aa8.58□□□□□ -1.04
SPTLC1-207ENST00000488921 TRBV30A0A0K0K1B3 111 aa8.57□□□□□ -1.04
SPTLC1-207ENST00000488921 UNQ6190/PRO20217Q6UXQ8 127 aa8.57□□□□□ -1.04
SPTLC1-207ENST00000488921 LINC00173Q6ZV60 143 aa8.57□□□□□ -1.04
SPTLC1-207ENST00000488921 HIST3H2BBQ8N257 126 aa8.57□□□□□ -1.04
SPTLC1-207ENST00000488921 C6orf48Q9UBA6 75 aa8.57□□□□□ -1.04
SPTLC1-207ENST00000488921 TNXBP22105 4242 aa8.56□□□□□ -1.04
SPTLC1-207ENST00000488921 C5orf52A6NGY3 159 aa8.56□□□□□ -1.04
SPTLC1-207ENST00000488921 H0Y8G0 127 aa8.56□□□□□ -1.04
SPTLC1-207ENST00000488921 KIAA0087Q14695 138 aa8.56□□□□□ -1.04
SPTLC1-207ENST00000488921 C10orf25Q5T742 122 aa8.56□□□□□ -1.04
SPTLC1-207ENST00000488921 FAM19A3Q7Z5A8 133 aa8.56□□□□□ -1.04
SPTLC1-207ENST00000488921 GEMIN7Q9H840 131 aaKnown RBP8.56□□□□□ -1.04
SPTLC1-207ENST00000488921 TRAV12-1A0A0B4J245 112 aa8.55□□□□□ -1.04
SPTLC1-207ENST00000488921 PRSS2P07478 247 aa8.55□□□□□ -1.04
SPTLC1-207ENST00000488921 HERVK_113P63121 156 aa8.55□□□□□ -1.04
SPTLC1-207ENST00000488921 ZC2HC1BQ5TFG8 222 aa8.55□□□□□ -1.04
SPTLC1-207ENST00000488921 LINC01600Q96MT4 127 aa8.55□□□□□ -1.04
SPTLC1-207ENST00000488921 HMCN2Q8NDA2 5059 aa8.54□□□□□ -1.04
SPTLC1-207ENST00000488921 LORP23490 312 aaPredicted RBP8.54□□□□□ -1.04
SPTLC1-207ENST00000488921 KRTDAPP60985 99 aa8.54□□□□□ -1.04
SPTLC1-207ENST00000488921 PSORS1C2Q9UIG4 136 aa8.54□□□□□ -1.04
SPTLC1-207ENST00000488921 CHTOPQ9Y3Y2 248 aaKnown RBP8.54□□□□□ -1.04
SPTLC1-207ENST00000488921 NDUFC2-KCTD14E9PQ53 114 aa8.53□□□□□ -1.04
SPTLC1-207ENST00000488921 SRSF9Q13242 221 aaKnown RBP eCLIP8.53□□□□□ -1.04
SPTLC1-207ENST00000488921 GAGE2EQ4V326 116 aa8.53□□□□□ -1.04
SPTLC1-207ENST00000488921 C4orf48Q5BLP8 95 aa8.53□□□□□ -1.04
SPTLC1-207ENST00000488921 PHF5AQ7RTV0 110 aaKnown RBP8.53□□□□□ -1.04
SPTLC1-207ENST00000488921 Q8IZM0 81 aa8.53□□□□□ -1.04
SPTLC1-207ENST00000488921 HIST1H2BLQ99880 126 aa8.53□□□□□ -1.04
SPTLC1-207ENST00000488921 GAGE2DQ9UEU5 116 aa8.53□□□□□ -1.04
SPTLC1-207ENST00000488921 TINCRA0A1B0GVN0 87 aa8.52□□□□□ -1.05
SPTLC1-207ENST00000488921 SYS1-DBNDD2H3BUS1 97 aa8.52□□□□□ -1.05
SPTLC1-207ENST00000488921 CKS1BP61024 79 aa8.52□□□□□ -1.05
SPTLC1-207ENST00000488921 PET117Q6UWS5 81 aa8.52□□□□□ -1.05
SPTLC1-207ENST00000488921 C2orf82Q6UX34 121 aa8.52□□□□□ -1.05
SPTLC1-207ENST00000488921 TOMM7Q9P0U1 55 aa8.52□□□□□ -1.05
SPTLC1-207ENST00000488921 C20orf202A1L168 122 aa8.51□□□□□ -1.05
SPTLC1-207ENST00000488921 C6orf226Q5I0X4 101 aa8.51□□□□□ -1.05
SPTLC1-207ENST00000488921 C1orf137Q5JT78 98 aa8.51□□□□□ -1.05
SPTLC1-207ENST00000488921 FAM19A5Q7Z5A7 132 aaPredicted RBP8.51□□□□□ -1.05
SPTLC1-207ENST00000488921 FAM168BA1KXE4 195 aa8.5□□□□□ -1.05
SPTLC1-207ENST00000488921 F8VRH5 84 aa8.5□□□□□ -1.05
SPTLC1-207ENST00000488921 H3BRM9 83 aa8.5□□□□□ -1.05
SPTLC1-207ENST00000488921 C3orf79P0CE67 100 aa8.5□□□□□ -1.05
SPTLC1-207ENST00000488921 LINC00469Q8N7U9 141 aa8.5□□□□□ -1.05
SPTLC1-207ENST00000488921 CDKN2A-AS1Q9UH64 79 aa8.5□□□□□ -1.05
SPTLC1-207ENST00000488921 M0QXV9 152 aa8.49□□□□□ -1.05
SPTLC1-207ENST00000488921 IGLC3P0DOY3 106 aa8.49□□□□□ -1.05
SPTLC1-207ENST00000488921 PLNP26678 52 aa8.49□□□□□ -1.05
SPTLC1-207ENST00000488921 CXCL5P42830 114 aa8.49□□□□□ -1.05
SPTLC1-207ENST00000488921 AKR1D1P51857 326 aa8.49□□□□□ -1.05
SPTLC1-207ENST00000488921 ODF1Q14990 250 aa8.49□□□□□ -1.05
SPTLC1-207ENST00000488921 DPM2O94777 84 aa8.48□□□□□ -1.05
SPTLC1-207ENST00000488921 TMEM170BQ5T4T1 132 aa8.48□□□□□ -1.05
SPTLC1-207ENST00000488921 IGKCP01834 107 aa8.47□□□□□ -1.05
SPTLC1-207ENST00000488921 UBE2BP63146 152 aa8.47□□□□□ -1.05
SPTLC1-207ENST00000488921 C11orf86A6NJI1 115 aa8.46□□□□□ -1.06
SPTLC1-207ENST00000488921 IGLV7-43P04211 117 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms