RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 A0A1B0GVY2 172 aa8.01□□□□□ -1.13
TRAIP-209ENST00000488860 E9PLD3 99 aa8.01□□□□□ -1.13
TRAIP-209ENST00000488860 SLPIP03973 132 aa8.01□□□□□ -1.13
TRAIP-209ENST00000488860 CXCL5P42830 114 aa8.01□□□□□ -1.13
TRAIP-209ENST00000488860 TSPEAR-AS2P59090 65 aa8.01□□□□□ -1.13
TRAIP-209ENST00000488860 CNBPP62633 177 aaKnown RBP8.01□□□□□ -1.13
TRAIP-209ENST00000488860 MAJINQ3KP22 176 aa8.01□□□□□ -1.13
TRAIP-209ENST00000488860 ANKRD39Q53RE8 183 aa8.01□□□□□ -1.13
TRAIP-209ENST00000488860 UNQ6190/PRO20217Q6UXQ8 127 aa8.01□□□□□ -1.13
TRAIP-209ENST00000488860 J3QQQ9 107 aa8□□□□□ -1.13
TRAIP-209ENST00000488860 NMUP48645 174 aa8□□□□□ -1.13
TRAIP-209ENST00000488860 LINC01620Q4KN68 170 aa8□□□□□ -1.13
TRAIP-209ENST00000488860 C10orf25Q5T742 122 aa8□□□□□ -1.13
TRAIP-209ENST00000488860 DNAH5Q8TE73 4624 aa7.99□□□□□ -1.13
TRAIP-209ENST00000488860 IGKV2D-26A0A0A0MRZ7 120 aa7.99□□□□□ -1.13
TRAIP-209ENST00000488860 F8WDY8 70 aa7.99□□□□□ -1.13
TRAIP-209ENST00000488860 PYY3Q5JQD4 70 aa7.99□□□□□ -1.13
TRAIP-209ENST00000488860 ZNF625Q96I27 306 aaPredicted RBP7.99□□□□□ -1.13
TRAIP-209ENST00000488860 PGPEP1Q9NXJ5 209 aa7.99□□□□□ -1.13
TRAIP-209ENST00000488860 C6orf48Q9UBA6 75 aa7.99□□□□□ -1.13
TRAIP-209ENST00000488860 CDPF1Q6NVV7 123 aa7.98□□□□□ -1.13
TRAIP-209ENST00000488860 NDUFA12Q9UI09 145 aa7.98□□□□□ -1.13
TRAIP-209ENST00000488860 TRBV30A0A0K0K1B3 111 aa7.97□□□□□ -1.13
TRAIP-209ENST00000488860 LOC105371267A0A1B0GV96 52 aa7.97□□□□□ -1.13
TRAIP-209ENST00000488860 C16orf90A8MZG2 172 aa7.97□□□□□ -1.13
TRAIP-209ENST00000488860 C9orf116Q5BN46 136 aaPredicted RBP7.97□□□□□ -1.13
TRAIP-209ENST00000488860 VAMP8Q9BV40 100 aa7.97□□□□□ -1.13
TRAIP-209ENST00000488860 PAM16Q9Y3D7 125 aa7.97□□□□□ -1.13
TRAIP-209ENST00000488860 PKHD1P08F94 4074 aa7.96□□□□□ -1.13
TRAIP-209ENST00000488860 MYMXA0A1B0GTQ4 84 aa7.96□□□□□ -1.14
TRAIP-209ENST00000488860 GCSHP23434 173 aa7.96□□□□□ -1.14
TRAIP-209ENST00000488860 RPL18AQ02543 176 aaKnown RBP7.96□□□□□ -1.14
TRAIP-209ENST00000488860 SFTA2Q6UW10 78 aa7.96□□□□□ -1.14
TRAIP-209ENST00000488860 C9orf163Q8N9P6 203 aa7.96□□□□□ -1.14
TRAIP-209ENST00000488860 TTTY13Q9BZ97 58 aa7.96□□□□□ -1.14
TRAIP-209ENST00000488860 ZNF815PA8K554 130 aa7.95□□□□□ -1.14
TRAIP-209ENST00000488860 SPATA45Q537H7 98 aa7.95□□□□□ -1.14
TRAIP-209ENST00000488860 MEIG1Q5JSS6 88 aa7.95□□□□□ -1.14
TRAIP-209ENST00000488860 LOC107984640A0A0U1RRK4 108 aa7.94□□□□□ -1.14
TRAIP-209ENST00000488860 PFN2P35080 140 aa7.94□□□□□ -1.14
TRAIP-209ENST00000488860 HERV-K104P63124 156 aa7.94□□□□□ -1.14
TRAIP-209ENST00000488860 RNF151Q2KHN1 245 aa7.94□□□□□ -1.14
TRAIP-209ENST00000488860 ERG28Q9UKR5 140 aa7.94□□□□□ -1.14
TRAIP-209ENST00000488860 IGKV2-24A0A0C4DH68 120 aa7.93□□□□□ -1.14
TRAIP-209ENST00000488860 A0A0U1RRA0 63 aa7.93□□□□□ -1.14
TRAIP-209ENST00000488860 GAGE2BQ13066 116 aa7.93□□□□□ -1.14
TRAIP-209ENST00000488860 PCP2Q8IVA1 136 aa7.93□□□□□ -1.14
TRAIP-209ENST00000488860 PKIGQ9Y2B9 76 aa7.93□□□□□ -1.14
TRAIP-209ENST00000488860 DYNC1H1Q14204 4646 aaKnown RBP7.92□□□□□ -1.14
TRAIP-209ENST00000488860 LINC00158P58513 81 aa7.92□□□□□ -1.14
TRAIP-209ENST00000488860 KRTAP10-1P60331 282 aa7.92□□□□□ -1.14
TRAIP-209ENST00000488860 GAGE2EQ4V326 116 aa7.92□□□□□ -1.14
TRAIP-209ENST00000488860 GAGE2DQ9UEU5 116 aa7.92□□□□□ -1.14
TRAIP-209ENST00000488860 A0A096LNI7 61 aa7.91□□□□□ -1.14
TRAIP-209ENST00000488860 A0A0J9YXY3 114 aa7.91□□□□□ -1.14
TRAIP-209ENST00000488860 NDUFC2-KCTD14E9PQ53 114 aa7.91□□□□□ -1.14
TRAIP-209ENST00000488860 CHTF8P0CG12 524 aa7.91□□□□□ -1.14
TRAIP-209ENST00000488860 SMIM6P0DI80 62 aa7.91□□□□□ -1.14
TRAIP-209ENST00000488860 SMIM13P0DJ93 91 aa7.91□□□□□ -1.14
TRAIP-209ENST00000488860 S100A12P80511 92 aa7.91□□□□□ -1.14
TRAIP-209ENST00000488860 SCGB1D4Q6XE38 83 aa7.91□□□□□ -1.14
TRAIP-209ENST00000488860 Q6ZRP5 223 aa7.91□□□□□ -1.14
TRAIP-209ENST00000488860 TP73-AS1Q9UF72 201 aa7.91□□□□□ -1.14
TRAIP-209ENST00000488860 SDIM1Q6ZPB5 146 aa7.9□□□□□ -1.14
TRAIP-209ENST00000488860 TLX1NBP0CAT3 122 aa7.89□□□□□ -1.15
TRAIP-209ENST00000488860 PTTG1IPP53801 180 aa7.89□□□□□ -1.15
TRAIP-209ENST00000488860 C14orf144Q96I85 54 aa7.89□□□□□ -1.15
TRAIP-209ENST00000488860 DNAH8Q96JB1 4490 aa7.88□□□□□ -1.15
TRAIP-209ENST00000488860 LINC00587B1AMM8 73 aa7.88□□□□□ -1.15
TRAIP-209ENST00000488860 COX8AP10176 69 aa7.88□□□□□ -1.15
TRAIP-209ENST00000488860 COX17Q14061 63 aa7.88□□□□□ -1.15
TRAIP-209ENST00000488860 DAND5Q8N907 189 aa7.88□□□□□ -1.15
TRAIP-209ENST00000488860 DPH3Q96FX2 82 aa7.88□□□□□ -1.15
TRAIP-209ENST00000488860 XAGE1AQ9HD64 81 aa7.88□□□□□ -1.15
TRAIP-209ENST00000488860 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.88□□□□□ -1.15
TRAIP-209ENST00000488860 EPPK1P58107 5090 aaKnown RBP7.88□□□□□ -1.15
TRAIP-209ENST00000488860 LRP1BQ9NZR2 4599 aa7.87□□□□□ -1.15
TRAIP-209ENST00000488860 PANO1I0J062 215 aa7.87□□□□□ -1.15
TRAIP-209ENST00000488860 CIRBPQ14011 172 aaKnown RBP7.87□□□□□ -1.15
TRAIP-209ENST00000488860 MIR7-3HGQ8N6C7 128 aa7.87□□□□□ -1.15
TRAIP-209ENST00000488860 NPC2P61916 151 aa7.86□□□□□ -1.15
TRAIP-209ENST00000488860 HAMPP81172 84 aa7.86□□□□□ -1.15
TRAIP-209ENST00000488860 SPACA4Q8TDM5 124 aa7.86□□□□□ -1.15
TRAIP-209ENST00000488860 FAM30AQ9NZY2 134 aa7.86□□□□□ -1.15
TRAIP-209ENST00000488860 TMEM238C9JI98 176 aa7.85□□□□□ -1.15
TRAIP-209ENST00000488860 C9orf129Q5T035 196 aaKnown RBP7.85□□□□□ -1.15
TRAIP-209ENST00000488860 SLC25A34Q6PIV7 304 aa7.85□□□□□ -1.15
TRAIP-209ENST00000488860 BOD1L2Q8IYS8 172 aa7.85□□□□□ -1.15
TRAIP-209ENST00000488860 SND1-IT1Q9HBX3 110 aa7.85□□□□□ -1.15
TRAIP-209ENST00000488860 LINC00474Q9P2X8 69 aa7.85□□□□□ -1.15
TRAIP-209ENST00000488860 TIMM17BO60830 172 aa7.84□□□□□ -1.15
TRAIP-209ENST00000488860 FAM19A5Q7Z5A7 132 aaPredicted RBP7.84□□□□□ -1.15
TRAIP-209ENST00000488860 C12orf57Q99622 126 aa7.84□□□□□ -1.15
TRAIP-209ENST00000488860 MIEN1Q9BRT3 115 aa7.84□□□□□ -1.15
TRAIP-209ENST00000488860 FAM168BA1KXE4 195 aa7.83□□□□□ -1.16
TRAIP-209ENST00000488860 ADAMTSL4-AS1Q5T5F5 129 aa7.83□□□□□ -1.16
TRAIP-209ENST00000488860 Q6ZSA8 131 aa7.83□□□□□ -1.16
TRAIP-209ENST00000488860 LITAFQ99732 161 aa7.83□□□□□ -1.16
TRAIP-209ENST00000488860 PRO1933Q9H354 126 aa7.83□□□□□ -1.16
TRAIP-209ENST00000488860 DLEU1O43261 78 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms