RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 PTH2Q96A98 100 aa1.14□□□□□ -2.23
ITGB1-214ENST00000488427 DERL1Q9BUN8 251 aa1.14□□□□□ -2.23
ITGB1-214ENST00000488427 PRELID1Q9Y255 219 aa1.14□□□□□ -2.23
ITGB1-214ENST00000488427 IGHV1-24A0A0C4DH33 117 aa1.13□□□□□ -2.23
ITGB1-214ENST00000488427 GNGT2O14610 69 aa1.13□□□□□ -2.23
ITGB1-214ENST00000488427 NPYP01303 97 aa1.13□□□□□ -2.23
ITGB1-214ENST00000488427 TCRAP04437 139 aa1.13□□□□□ -2.23
ITGB1-214ENST00000488427 S100GP29377 79 aa1.13□□□□□ -2.23
ITGB1-214ENST00000488427 IQCJQ1A5X6 159 aa1.13□□□□□ -2.23
ITGB1-214ENST00000488427 IFT20Q8IY31 132 aa1.13□□□□□ -2.23
ITGB1-214ENST00000488427 TMSB15BA0A087X1C1 80 aa1.12□□□□□ -2.23
ITGB1-214ENST00000488427 TRAV21A0A0B4J279 112 aa1.12□□□□□ -2.23
ITGB1-214ENST00000488427 IGKV3D-7A0A0C4DH55 119 aa1.12□□□□□ -2.23
ITGB1-214ENST00000488427 A0A0G2JND7 137 aa1.12□□□□□ -2.23
ITGB1-214ENST00000488427 TRBV6-1A0A0K0K1D8 114 aa1.12□□□□□ -2.23
ITGB1-214ENST00000488427 H3BQ15 152 aa1.12□□□□□ -2.23
ITGB1-214ENST00000488427 IL5P05113 134 aa1.12□□□□□ -2.23
ITGB1-214ENST00000488427 IGLC2P0DOY2 106 aa1.12□□□□□ -2.23
ITGB1-214ENST00000488427 SLC38A11Q08AI6 406 aa1.12□□□□□ -2.23
ITGB1-214ENST00000488427 KRTAP19-8Q3LI54 63 aa1.12□□□□□ -2.23
ITGB1-214ENST00000488427 KRTAP20-2Q3LI61 65 aa1.12□□□□□ -2.23
ITGB1-214ENST00000488427 DYNC2LI1Q8TCX1 351 aa1.12□□□□□ -2.23
ITGB1-214ENST00000488427 CYGBQ8WWM9 190 aa1.12□□□□□ -2.23
ITGB1-214ENST00000488427 PLEKHB2Q96CS7 222 aa1.12□□□□□ -2.23
ITGB1-214ENST00000488427 DIRAS2Q96HU8 199 aa1.12□□□□□ -2.23
ITGB1-214ENST00000488427 C22orf24Q9Y442 160 aa1.12□□□□□ -2.23
ITGB1-214ENST00000488427 U3KQ87 197 aa1.12□□□□□ -2.23
ITGB1-214ENST00000488427 M0R036 132 aa1.11□□□□□ -2.23
ITGB1-214ENST00000488427 CCL25O15444 150 aa1.11□□□□□ -2.23
ITGB1-214ENST00000488427 AKR1C3P42330 323 aa1.11□□□□□ -2.23
ITGB1-214ENST00000488427 GNG2P59768 71 aa1.11□□□□□ -2.23
ITGB1-214ENST00000488427 PRLHP81277 87 aa1.11□□□□□ -2.23
ITGB1-214ENST00000488427 AKR1C1Q04828 323 aa1.11□□□□□ -2.23
ITGB1-214ENST00000488427 IZUMO2Q6UXV1 221 aa1.11□□□□□ -2.23
ITGB1-214ENST00000488427 CYP2G1PQ6ZSU1 146 aa1.11□□□□□ -2.23
ITGB1-214ENST00000488427 LINC00305Q7Z4B0 112 aa1.11□□□□□ -2.23
ITGB1-214ENST00000488427 SMCR5Q8TEV8 140 aa1.11□□□□□ -2.23
ITGB1-214ENST00000488427 BTF3L4Q96K17 158 aa1.11□□□□□ -2.23
ITGB1-214ENST00000488427 PACRGQ96M98 296 aaPredicted RBP1.11□□□□□ -2.23
ITGB1-214ENST00000488427 FAM210AQ96ND0 272 aa1.11□□□□□ -2.23
ITGB1-214ENST00000488427 SPRR4Q96PI1 79 aa1.11□□□□□ -2.23
ITGB1-214ENST00000488427 LIMD2Q9BT23 127 aa1.11□□□□□ -2.23
ITGB1-214ENST00000488427 CCDC90BQ9GZT6 254 aa1.11□□□□□ -2.23
ITGB1-214ENST00000488427 CST9LQ9H4G1 147 aa1.11□□□□□ -2.23
ITGB1-214ENST00000488427 EFCAB1Q9HAE3 211 aa1.11□□□□□ -2.23
ITGB1-214ENST00000488427 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.11□□□□□ -2.23
ITGB1-214ENST00000488427 FGFR1OP2Q9NVK5 253 aa1.11□□□□□ -2.23
ITGB1-214ENST00000488427 MED9Q9NWA0 146 aa1.11□□□□□ -2.23
ITGB1-214ENST00000488427 NKIRAS1Q9NYS0 192 aa1.11□□□□□ -2.23
ITGB1-214ENST00000488427 MRPL35Q9NZE8 188 aaKnown RBP1.11□□□□□ -2.23
ITGB1-214ENST00000488427 IL36BQ9NZH7 164 aa1.11□□□□□ -2.23
ITGB1-214ENST00000488427 EDF1O60869 148 aaKnown RBP1.1□□□□□ -2.23
ITGB1-214ENST00000488427 RNASE3P12724 160 aaKnown RBP1.1□□□□□ -2.23
ITGB1-214ENST00000488427 S100A4P26447 101 aaKnown RBP1.1□□□□□ -2.23
ITGB1-214ENST00000488427 DAPP51397 102 aa1.1□□□□□ -2.23
ITGB1-214ENST00000488427 SPAG11BQ08648 103 aa1.1□□□□□ -2.23
ITGB1-214ENST00000488427 PATE2Q6UY27 113 aa1.1□□□□□ -2.23
ITGB1-214ENST00000488427 STOML3Q8TAV4 291 aa1.1□□□□□ -2.23
ITGB1-214ENST00000488427 CANT1Q8WVQ1 401 aa1.1□□□□□ -2.23
ITGB1-214ENST00000488427 SLC25A21Q9BQT8 299 aaPredicted RBP1.1□□□□□ -2.23
ITGB1-214ENST00000488427 CCDC32Q9BV29 185 aa1.1□□□□□ -2.23
ITGB1-214ENST00000488427 GNB1LQ9BYB4 327 aa1.1□□□□□ -2.23
ITGB1-214ENST00000488427 FXYD6Q9H0Q3 95 aa1.1□□□□□ -2.23
ITGB1-214ENST00000488427 TIMM9Q9Y5J7 89 aa1.1□□□□□ -2.23
ITGB1-214ENST00000488427 LENEPQ9Y5L5 61 aa1.1□□□□□ -2.23
ITGB1-214ENST00000488427 TRBV19A0A075B6N1 114 aa1.09□□□□□ -2.23
ITGB1-214ENST00000488427 F6UZH7 168 aa1.09□□□□□ -2.23
ITGB1-214ENST00000488427 COX7A2LO14548 114 aa1.09□□□□□ -2.23
ITGB1-214ENST00000488427 NDUFA1O15239 70 aa1.09□□□□□ -2.23
ITGB1-214ENST00000488427 CASQ1P31415 396 aa1.09□□□□□ -2.23
ITGB1-214ENST00000488427 ZNF80P51504 273 aaPredicted RBP1.09□□□□□ -2.23
ITGB1-214ENST00000488427 NKX2-5P52952 324 aaPredicted RBP1.09□□□□□ -2.23
ITGB1-214ENST00000488427 LINC00313P59037 77 aa1.09□□□□□ -2.23
ITGB1-214ENST00000488427 ZNF56Q15929 161 aa1.09□□□□□ -2.23
ITGB1-214ENST00000488427 SSBP3-AS1Q7Z2R9 100 aa1.09□□□□□ -2.23
ITGB1-214ENST00000488427 ATG5Q9H1Y0 275 aa1.09□□□□□ -2.23
ITGB1-214ENST00000488427 SAR1AQ9NR31 198 aa1.09□□□□□ -2.23
ITGB1-214ENST00000488427 SCN3BQ9NY72 215 aa1.09□□□□□ -2.23
ITGB1-214ENST00000488427 PAIP2BQ9ULR5 123 aaKnown RBP1.09□□□□□ -2.23
ITGB1-214ENST00000488427 TRBV6-5A0A0K0K1A5 114 aa1.08□□□□□ -2.24
ITGB1-214ENST00000488427 LINC00959A0A1B0GUT2 108 aa1.08□□□□□ -2.24
ITGB1-214ENST00000488427 A8MUN3 132 aa1.08□□□□□ -2.24
ITGB1-214ENST00000488427 H2BFSP57053 126 aa1.08□□□□□ -2.24
ITGB1-214ENST00000488427 RAB4BP61018 213 aa1.08□□□□□ -2.24
ITGB1-214ENST00000488427 HERVK_113P63121 156 aa1.08□□□□□ -2.24
ITGB1-214ENST00000488427 PDE6HQ13956 83 aa1.08□□□□□ -2.24
ITGB1-214ENST00000488427 IAH1Q2TAA2 248 aaPredicted RBP1.08□□□□□ -2.24
ITGB1-214ENST00000488427 UNQ6190/PRO20217Q6UXQ8 127 aa1.08□□□□□ -2.24
ITGB1-214ENST00000488427 TREM1Q9NP99 234 aa1.08□□□□□ -2.24
ITGB1-214ENST00000488427 C6orf48Q9UBA6 75 aa1.08□□□□□ -2.24
ITGB1-214ENST00000488427 CACFD1Q9UGQ2 172 aa1.08□□□□□ -2.24
ITGB1-214ENST00000488427 LOC107984156A0A0G2JMH3 177 aa1.07□□□□□ -2.24
ITGB1-214ENST00000488427 A0A1B0GW54 56 aa1.07□□□□□ -2.24
ITGB1-214ENST00000488427 LINC00614P0C842 121 aa1.07□□□□□ -2.24
ITGB1-214ENST00000488427 UBE2G2P60604 165 aa1.07□□□□□ -2.24
ITGB1-214ENST00000488427 PPP1R1AQ13522 171 aa1.07□□□□□ -2.24
ITGB1-214ENST00000488427 WHAMMP3Q1A5X7 153 aa1.07□□□□□ -2.24
ITGB1-214ENST00000488427 C10orf113Q5VZT2 155 aa1.07□□□□□ -2.24
ITGB1-214ENST00000488427 ATP5L2Q7Z4Y8 100 aa1.07□□□□□ -2.24
ITGB1-214ENST00000488427 Q86TA4 180 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms