RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 PMCHL2Q9BQD1 86 aa10.9□□□□□ -0.66
SHROOM1-205ENST00000488072 GAGE2BQ13066 116 aa10.89□□□□□ -0.67
SHROOM1-205ENST00000488072 NDUFA1O15239 70 aa10.88□□□□□ -0.67
SHROOM1-205ENST00000488072 ODF1Q14990 250 aa10.88□□□□□ -0.67
SHROOM1-205ENST00000488072 MAJINQ3KP22 176 aa10.88□□□□□ -0.67
SHROOM1-205ENST00000488072 SPACA4Q8TDM5 124 aa10.88□□□□□ -0.67
SHROOM1-205ENST00000488072 A0A087WYN8 130 aa10.87□□□□□ -0.67
SHROOM1-205ENST00000488072 TRAV12-1A0A0B4J245 112 aa10.87□□□□□ -0.67
SHROOM1-205ENST00000488072 CIRBPQ14011 172 aaKnown RBP10.87□□□□□ -0.67
SHROOM1-205ENST00000488072 Q8N1X5 172 aa10.87□□□□□ -0.67
SHROOM1-205ENST00000488072 C6orf226Q5I0X4 101 aa10.86□□□□□ -0.67
SHROOM1-205ENST00000488072 TMEM170BQ5T4T1 132 aa10.86□□□□□ -0.67
SHROOM1-205ENST00000488072 Q8IZM0 81 aa10.86□□□□□ -0.67
SHROOM1-205ENST00000488072 COX7B2Q8TF08 81 aa10.86□□□□□ -0.67
SHROOM1-205ENST00000488072 DPH3Q96FX2 82 aa10.86□□□□□ -0.67
SHROOM1-205ENST00000488072 ABCA13Q86UQ4 5058 aa10.86□□□□□ -0.67
SHROOM1-205ENST00000488072 PRSS2P07478 247 aa10.85□□□□□ -0.67
SHROOM1-205ENST00000488072 RPL18AQ02543 176 aaKnown RBP10.85□□□□□ -0.67
SHROOM1-205ENST00000488072 COA6Q5JTJ3 125 aaKnown RBP10.85□□□□□ -0.67
SHROOM1-205ENST00000488072 IGLV5-39A0A0G2JS06 123 aa10.84□□□□□ -0.67
SHROOM1-205ENST00000488072 LOC107984640A0A0U1RRK4 108 aa10.84□□□□□ -0.67
SHROOM1-205ENST00000488072 F8VRH5 84 aa10.84□□□□□ -0.67
SHROOM1-205ENST00000488072 PTTG1IPP53801 180 aa10.84□□□□□ -0.67
SHROOM1-205ENST00000488072 Q6ZRP5 223 aa10.84□□□□□ -0.67
SHROOM1-205ENST00000488072 HSPB8Q9UJY1 196 aa10.84□□□□□ -0.67
SHROOM1-205ENST00000488072 VPS13BQ7Z7G8 4022 aa10.84□□□□□ -0.67
SHROOM1-205ENST00000488072 A0A1W2PNN7 141 aa10.83□□□□□ -0.68
SHROOM1-205ENST00000488072 H3BRM9 83 aa10.83□□□□□ -0.68
SHROOM1-205ENST00000488072 CKS1BP61024 79 aa10.83□□□□□ -0.68
SHROOM1-205ENST00000488072 RNF151Q2KHN1 245 aa10.83□□□□□ -0.68
SHROOM1-205ENST00000488072 Q5VSD8 79 aa10.83□□□□□ -0.68
SHROOM1-205ENST00000488072 LINC00528Q8N1L1 170 aa10.83□□□□□ -0.68
SHROOM1-205ENST00000488072 STPG4Q8N801 248 aa10.83□□□□□ -0.68
SHROOM1-205ENST00000488072 GAGE2EQ4V326 116 aa10.82□□□□□ -0.68
SHROOM1-205ENST00000488072 GAGE2DQ9UEU5 116 aa10.82□□□□□ -0.68
SHROOM1-205ENST00000488072 TMEM223A0PJW6 202 aa10.81□□□□□ -0.68
SHROOM1-205ENST00000488072 FAM168BA1KXE4 195 aa10.81□□□□□ -0.68
SHROOM1-205ENST00000488072 F8WDY8 70 aa10.8□□□□□ -0.68
SHROOM1-205ENST00000488072 PLAC8Q9NZF1 115 aa10.8□□□□□ -0.68
SHROOM1-205ENST00000488072 TRBV30A0A0K0K1B3 111 aa10.79□□□□□ -0.68
SHROOM1-205ENST00000488072 EPM2AB3EWF7 344 aa10.79□□□□□ -0.68
SHROOM1-205ENST00000488072 KRTAP7-1Q8IUC3 87 aa10.79□□□□□ -0.68
SHROOM1-205ENST00000488072 SYS1-DBNDD2H3BUS1 97 aa10.78□□□□□ -0.68
SHROOM1-205ENST00000488072 ZNF625Q96I27 306 aaPredicted RBP10.78□□□□□ -0.68
SHROOM1-205ENST00000488072 MAP1LC3CQ9BXW4 147 aa10.78□□□□□ -0.68
SHROOM1-205ENST00000488072 TLX1NBP0CAT3 122 aa10.77□□□□□ -0.69
SHROOM1-205ENST00000488072 C3orf79P0CE67 100 aa10.77□□□□□ -0.69
SHROOM1-205ENST00000488072 TSPEAR-AS2P59090 65 aa10.77□□□□□ -0.69
SHROOM1-205ENST00000488072 KRTAP10-4P60372 401 aaPredicted RBP10.77□□□□□ -0.69
SHROOM1-205ENST00000488072 C9orf129Q5T035 196 aaKnown RBP10.77□□□□□ -0.69
SHROOM1-205ENST00000488072 XAGE1AQ9HD64 81 aa10.76□□□□□ -0.69
SHROOM1-205ENST00000488072 NDUFC2-KCTD14E9PQ53 114 aa10.75□□□□□ -0.69
SHROOM1-205ENST00000488072 DPM2O94777 84 aa10.75□□□□□ -0.69
SHROOM1-205ENST00000488072 IGKCP01834 107 aa10.74□□□□□ -0.69
SHROOM1-205ENST00000488072 KRTDAPP60985 99 aa10.74□□□□□ -0.69
SHROOM1-205ENST00000488072 HIST3H2BBQ8N257 126 aa10.74□□□□□ -0.69
SHROOM1-205ENST00000488072 PCLOQ9Y6V0 5065 aa10.73□□□□□ -0.69
SHROOM1-205ENST00000488072 FAM229AH3BQW9 127 aa10.73□□□□□ -0.69
SHROOM1-205ENST00000488072 CXCL5P42830 114 aa10.73□□□□□ -0.69
SHROOM1-205ENST00000488072 PHF5AQ7RTV0 110 aaKnown RBP10.73□□□□□ -0.69
SHROOM1-205ENST00000488072 FAM19A5Q7Z5A7 132 aaPredicted RBP10.73□□□□□ -0.69
SHROOM1-205ENST00000488072 PFN2P35080 140 aa10.72□□□□□ -0.69
SHROOM1-205ENST00000488072 HNRNPA3P51991 378 aaKnown RBP10.72□□□□□ -0.69
SHROOM1-205ENST00000488072 SERTAD4-AS1Q5TG53 156 aa10.72□□□□□ -0.69
SHROOM1-205ENST00000488072 LINC01545Q5VT33 79 aa10.72□□□□□ -0.69
SHROOM1-205ENST00000488072 KRTAP11-1Q8IUC1 163 aa10.72□□□□□ -0.69
SHROOM1-205ENST00000488072 A0A0U1RRA0 63 aa10.71□□□□□ -0.69
SHROOM1-205ENST00000488072 SNRPEP62304 92 aaKnown RBP10.71□□□□□ -0.69
SHROOM1-205ENST00000488072 LINC00474Q9P2X8 69 aa10.71□□□□□ -0.69
SHROOM1-205ENST00000488072 PLNP26678 52 aa10.7□□□□□ -0.7
SHROOM1-205ENST00000488072 PET117Q6UWS5 81 aa10.7□□□□□ -0.7
SHROOM1-205ENST00000488072 HIST1H2BLQ99880 126 aa10.7□□□□□ -0.7
SHROOM1-205ENST00000488072 RPL37AP61513 92 aaKnown RBP10.69□□□□□ -0.7
SHROOM1-205ENST00000488072 PKIGQ9Y2B9 76 aa10.69□□□□□ -0.7
SHROOM1-205ENST00000488072 PKHD1L1Q86WI1 4243 aa10.69□□□□□ -0.7
SHROOM1-205ENST00000488072 LEPROTO15243 131 aa10.68□□□□□ -0.7
SHROOM1-205ENST00000488072 ATOH7Q8N100 152 aa10.68□□□□□ -0.7
SHROOM1-205ENST00000488072 ERG28Q9UKR5 140 aa10.68□□□□□ -0.7
SHROOM1-205ENST00000488072 SRRM2Q9UQ35 2752 aaKnown RBP10.66□□□□□ -0.7
SHROOM1-205ENST00000488072 S100A6P06703 90 aa10.66□□□□□ -0.7
SHROOM1-205ENST00000488072 INAFM2P0DMQ5 153 aa10.66□□□□□ -0.7
SHROOM1-205ENST00000488072 Q8NDZ9 215 aa10.66□□□□□ -0.7
SHROOM1-205ENST00000488072 NDUFA12Q9UI09 145 aa10.66□□□□□ -0.7
SHROOM1-205ENST00000488072 IGKV2D-26A0A0A0MRZ7 120 aa10.65□□□□□ -0.7
SHROOM1-205ENST00000488072 SMIM13P0DJ93 91 aa10.65□□□□□ -0.7
SHROOM1-205ENST00000488072 TTTY13Q9BZ97 58 aa10.65□□□□□ -0.7
SHROOM1-205ENST00000488072 C5orf52A6NGY3 159 aa10.64□□□□□ -0.71
SHROOM1-205ENST00000488072 J3QQQ9 107 aa10.64□□□□□ -0.71
SHROOM1-205ENST00000488072 PLA2G1BP04054 148 aaKnown RBP10.64□□□□□ -0.71
SHROOM1-205ENST00000488072 S100A2P29034 98 aa10.64□□□□□ -0.71
SHROOM1-205ENST00000488072 M0QXV9 152 aa10.63□□□□□ -0.71
SHROOM1-205ENST00000488072 LINC00158P58513 81 aa10.63□□□□□ -0.71
SHROOM1-205ENST00000488072 PLEKHB2Q96CS7 222 aa10.63□□□□□ -0.71
SHROOM1-205ENST00000488072 SND1-IT1Q9HBX3 110 aa10.63□□□□□ -0.71
SHROOM1-205ENST00000488072 E9PLD3 99 aa10.62□□□□□ -0.71
SHROOM1-205ENST00000488072 HERVK_113P61574 105 aa10.62□□□□□ -0.71
SHROOM1-205ENST00000488072 ANKRD39Q53RE8 183 aa10.62□□□□□ -0.71
SHROOM1-205ENST00000488072 C7orf33Q8WU49 177 aa10.62□□□□□ -0.71
SHROOM1-205ENST00000488072 C22orf24Q9Y442 160 aa10.62□□□□□ -0.71
SHROOM1-205ENST00000488072 FLG2Q5D862 2391 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms