RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 Q6ZRU5 148 aa8.59□□□□□ -1.03
COL4A6-207ENST00000487645 COX7B2Q8TF08 81 aa8.59□□□□□ -1.03
COL4A6-207ENST00000487645 PKIGQ9Y2B9 76 aa8.59□□□□□ -1.03
COL4A6-207ENST00000487645 CXCL5P42830 114 aa8.58□□□□□ -1.04
COL4A6-207ENST00000487645 LINC01620Q4KN68 170 aa8.58□□□□□ -1.04
COL4A6-207ENST00000487645 UNQ6190/PRO20217Q6UXQ8 127 aa8.58□□□□□ -1.04
COL4A6-207ENST00000487645 PMCHL2Q9BQD1 86 aa8.57□□□□□ -1.04
COL4A6-207ENST00000487645 DNAH5Q8TE73 4624 aa8.56□□□□□ -1.04
COL4A6-207ENST00000487645 TRBV30A0A0K0K1B3 111 aa8.56□□□□□ -1.04
COL4A6-207ENST00000487645 AKR1D1P51857 326 aa8.56□□□□□ -1.04
COL4A6-207ENST00000487645 C10orf25Q5T742 122 aa8.56□□□□□ -1.04
COL4A6-207ENST00000487645 C2orf82Q6UX34 121 aa8.56□□□□□ -1.04
COL4A6-207ENST00000487645 C20orf202A1L168 122 aa8.55□□□□□ -1.04
COL4A6-207ENST00000487645 Q6ZSA8 131 aa8.55□□□□□ -1.04
COL4A6-207ENST00000487645 DYNC1H1Q14204 4646 aaKnown RBP8.54□□□□□ -1.04
COL4A6-207ENST00000487645 LOC107984640A0A0U1RRK4 108 aa8.54□□□□□ -1.04
COL4A6-207ENST00000487645 HERVK_113P61574 105 aa8.54□□□□□ -1.04
COL4A6-207ENST00000487645 SFTA2Q6UW10 78 aa8.54□□□□□ -1.04
COL4A6-207ENST00000487645 C6orf48Q9UBA6 75 aa8.54□□□□□ -1.04
COL4A6-207ENST00000487645 CDK2AP2O75956 126 aa8.53□□□□□ -1.04
COL4A6-207ENST00000487645 TLX1NBP0CAT3 122 aa8.53□□□□□ -1.04
COL4A6-207ENST00000487645 FAM30AQ9NZY2 134 aa8.53□□□□□ -1.04
COL4A6-207ENST00000487645 LEPROTO15243 131 aa8.52□□□□□ -1.05
COL4A6-207ENST00000487645 S100A12P80511 92 aa8.52□□□□□ -1.05
COL4A6-207ENST00000487645 CIRBPQ14011 172 aaKnown RBP8.52□□□□□ -1.05
COL4A6-207ENST00000487645 PLEKHB2Q96CS7 222 aa8.52□□□□□ -1.05
COL4A6-207ENST00000487645 LINC00474Q9P2X8 69 aa8.52□□□□□ -1.05
COL4A6-207ENST00000487645 TMA7Q9Y2S6 64 aaKnown RBP8.51□□□□□ -1.05
COL4A6-207ENST00000487645 LRP1BQ9NZR2 4599 aa8.51□□□□□ -1.05
COL4A6-207ENST00000487645 E9PLD3 99 aa8.5□□□□□ -1.05
COL4A6-207ENST00000487645 NDUFC2-KCTD14E9PQ53 114 aa8.5□□□□□ -1.05
COL4A6-207ENST00000487645 PTTG1IPP53801 180 aa8.5□□□□□ -1.05
COL4A6-207ENST00000487645 XGP55808 180 aa8.5□□□□□ -1.05
COL4A6-207ENST00000487645 ZNF625Q96I27 306 aaPredicted RBP8.5□□□□□ -1.05
COL4A6-207ENST00000487645 A0A096LNI7 61 aa8.49□□□□□ -1.05
COL4A6-207ENST00000487645 C9orf116Q5BN46 136 aaPredicted RBP8.49□□□□□ -1.05
COL4A6-207ENST00000487645 SPACA4Q8TDM5 124 aa8.49□□□□□ -1.05
COL4A6-207ENST00000487645 DPH3Q96FX2 82 aa8.49□□□□□ -1.05
COL4A6-207ENST00000487645 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.49□□□□□ -1.05
COL4A6-207ENST00000487645 J3QQQ9 107 aa8.48□□□□□ -1.05
COL4A6-207ENST00000487645 HERV-K104P63124 156 aa8.48□□□□□ -1.05
COL4A6-207ENST00000487645 RPL18AQ02543 176 aaKnown RBP8.48□□□□□ -1.05
COL4A6-207ENST00000487645 GAGE2BQ13066 116 aa8.48□□□□□ -1.05
COL4A6-207ENST00000487645 COX17Q14061 63 aa8.48□□□□□ -1.05
COL4A6-207ENST00000487645 Q6ZRP5 223 aa8.48□□□□□ -1.05
COL4A6-207ENST00000487645 STPG4Q8N801 248 aa8.48□□□□□ -1.05
COL4A6-207ENST00000487645 IGKV2-24A0A0C4DH68 120 aa8.47□□□□□ -1.05
COL4A6-207ENST00000487645 MYMXA0A1B0GTQ4 84 aa8.47□□□□□ -1.05
COL4A6-207ENST00000487645 PANO1I0J062 215 aa8.47□□□□□ -1.05
COL4A6-207ENST00000487645 CHTF8P0CG12 524 aa8.47□□□□□ -1.05
COL4A6-207ENST00000487645 NMUP48645 174 aa8.47□□□□□ -1.05
COL4A6-207ENST00000487645 MAJINQ3KP22 176 aa8.47□□□□□ -1.05
COL4A6-207ENST00000487645 NDUFA12Q9UI09 145 aa8.47□□□□□ -1.05
COL4A6-207ENST00000487645 LINC00587B1AMM8 73 aa8.46□□□□□ -1.06
COL4A6-207ENST00000487645 LGALS3P17931 250 aaKnown RBP8.46□□□□□ -1.06
COL4A6-207ENST00000487645 DNAH8Q96JB1 4490 aa8.46□□□□□ -1.06
COL4A6-207ENST00000487645 A0A087WYN8 130 aa8.45□□□□□ -1.06
COL4A6-207ENST00000487645 SCGB1D1O95968 90 aa8.45□□□□□ -1.06
COL4A6-207ENST00000487645 TSPEAR-AS2P59090 65 aa8.45□□□□□ -1.06
COL4A6-207ENST00000487645 SCXQ7RTU7 201 aa8.45□□□□□ -1.06
COL4A6-207ENST00000487645 ATOH7Q8N100 152 aa8.45□□□□□ -1.06
COL4A6-207ENST00000487645 CIRBP-AS1Q8TBR5 109 aa8.45□□□□□ -1.06
COL4A6-207ENST00000487645 PLAC8Q9NZF1 115 aa8.45□□□□□ -1.06
COL4A6-207ENST00000487645 ERG28Q9UKR5 140 aa8.45□□□□□ -1.06
COL4A6-207ENST00000487645 EPM2AB3EWF7 344 aa8.44□□□□□ -1.06
COL4A6-207ENST00000487645 GAGE2EQ4V326 116 aa8.44□□□□□ -1.06
COL4A6-207ENST00000487645 GAGE2DQ9UEU5 116 aa8.44□□□□□ -1.06
COL4A6-207ENST00000487645 BIRC6Q9NR09 4857 aa8.44□□□□□ -1.06
COL4A6-207ENST00000487645 PFN2P35080 140 aa8.43□□□□□ -1.06
COL4A6-207ENST00000487645 IGKV2D-26A0A0A0MRZ7 120 aa8.42□□□□□ -1.06
COL4A6-207ENST00000487645 APOBP04114 4563 aaKnown RBP8.42□□□□□ -1.06
COL4A6-207ENST00000487645 HSBP1L1C9JCN9 74 aa8.41□□□□□ -1.06
COL4A6-207ENST00000487645 LINC00158P58513 81 aa8.41□□□□□ -1.06
COL4A6-207ENST00000487645 HAMPP81172 84 aa8.41□□□□□ -1.06
COL4A6-207ENST00000487645 JOSD1Q15040 202 aaPredicted RBP8.41□□□□□ -1.06
COL4A6-207ENST00000487645 ANKRD39Q53RE8 183 aa8.41□□□□□ -1.06
COL4A6-207ENST00000487645 C9orf129Q5T035 196 aaKnown RBP8.41□□□□□ -1.06
COL4A6-207ENST00000487645 A0A1W2PNN7 141 aa8.4□□□□□ -1.06
COL4A6-207ENST00000487645 MEIG1Q5JSS6 88 aa8.4□□□□□ -1.06
COL4A6-207ENST00000487645 KIAA1109Q2LD37 5005 aa8.39□□□□□ -1.07
COL4A6-207ENST00000487645 SMIM13P0DJ93 91 aa8.39□□□□□ -1.07
COL4A6-207ENST00000487645 LINC00518Q8N0U6 118 aa8.39□□□□□ -1.07
COL4A6-207ENST00000487645 SND1-IT1Q9HBX3 110 aa8.39□□□□□ -1.07
COL4A6-207ENST00000487645 XAGE1AQ9HD64 81 aa8.39□□□□□ -1.07
COL4A6-207ENST00000487645 PLA2G2DQ9UNK4 145 aa8.39□□□□□ -1.07
COL4A6-207ENST00000487645 A0A0J9YXY3 114 aa8.38□□□□□ -1.07
COL4A6-207ENST00000487645 ZNF815PA8K554 130 aa8.38□□□□□ -1.07
COL4A6-207ENST00000487645 FAM168BA1KXE4 195 aa8.37□□□□□ -1.07
COL4A6-207ENST00000487645 SMR3BP02814 79 aaPredicted RBP8.37□□□□□ -1.07
COL4A6-207ENST00000487645 HSPG2P98160 4391 aa8.37□□□□□ -1.07
COL4A6-207ENST00000487645 RYR1P21817 5038 aa8.36□□□□□ -1.07
COL4A6-207ENST00000487645 A0A0U1RRA0 63 aa8.36□□□□□ -1.07
COL4A6-207ENST00000487645 TIMM17BO60830 172 aa8.36□□□□□ -1.07
COL4A6-207ENST00000487645 KRTAP7-1Q8IUC3 87 aa8.36□□□□□ -1.07
COL4A6-207ENST00000487645 Q8N1X5 172 aa8.36□□□□□ -1.07
COL4A6-207ENST00000487645 MIR7-3HGQ8N6C7 128 aa8.36□□□□□ -1.07
COL4A6-207ENST00000487645 FAM229AH3BQW9 127 aa8.35□□□□□ -1.07
COL4A6-207ENST00000487645 FAM19A5Q7Z5A7 132 aaPredicted RBP8.35□□□□□ -1.07
COL4A6-207ENST00000487645 TTTY13Q9BZ97 58 aa8.35□□□□□ -1.07
COL4A6-207ENST00000487645 LOC107984156A0A0G2JMH3 177 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms