RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 TMEM136Q6ZRR5 245 aa3.15□□□□□ -1.91
COL4A3-206ENST00000487633 ORMDL3Q8N138 153 aa3.15□□□□□ -1.91
COL4A3-206ENST00000487633 DAND5Q8N907 189 aa3.15□□□□□ -1.91
COL4A3-206ENST00000487633 TMEM101Q96IK0 257 aa3.15□□□□□ -1.91
COL4A3-206ENST00000487633 KIR2DL4Q99706 377 aa3.15□□□□□ -1.91
COL4A3-206ENST00000487633 CDC42SE2Q9NRR3 84 aa3.15□□□□□ -1.91
COL4A3-206ENST00000487633 TMEM242Q9NWH2 141 aa3.15□□□□□ -1.91
COL4A3-206ENST00000487633 MRPL35Q9NZE8 188 aaKnown RBP3.15□□□□□ -1.91
COL4A3-206ENST00000487633 C22orf24Q9Y442 160 aa3.15□□□□□ -1.91
COL4A3-206ENST00000487633 TRAV9-1A0A075B6T8 112 aa3.14□□□□□ -1.91
COL4A3-206ENST00000487633 LOC389332A0A1B0GUA5 103 aa3.14□□□□□ -1.91
COL4A3-206ENST00000487633 TNFRSF6BO95407 300 aa3.14□□□□□ -1.91
COL4A3-206ENST00000487633 RAB5AP20339 215 aa3.14□□□□□ -1.91
COL4A3-206ENST00000487633 MALP21145 153 aa3.14□□□□□ -1.91
COL4A3-206ENST00000487633 NRACQ8N912 160 aa3.14□□□□□ -1.91
COL4A3-206ENST00000487633 PRELID3AQ96N28 172 aa3.14□□□□□ -1.91
COL4A3-206ENST00000487633 C20orf78Q9BR46 151 aa3.14□□□□□ -1.91
COL4A3-206ENST00000487633 KRTAP9-3Q9BYQ3 159 aa3.14□□□□□ -1.91
COL4A3-206ENST00000487633 TRBV24-1A0A075B6N3 115 aa3.13□□□□□ -1.91
COL4A3-206ENST00000487633 TRBV27A0A0K0K1C4 114 aa3.13□□□□□ -1.91
COL4A3-206ENST00000487633 LOC105371267A0A1B0GV96 52 aa3.13□□□□□ -1.91
COL4A3-206ENST00000487633 RPL37AP8A6NKH3 93 aa3.13□□□□□ -1.91
COL4A3-206ENST00000487633 COLCA2A8K830 154 aa3.13□□□□□ -1.91
COL4A3-206ENST00000487633 COX7A2LO14548 114 aa3.13□□□□□ -1.91
COL4A3-206ENST00000487633 TCAPO15273 167 aa3.13□□□□□ -1.91
COL4A3-206ENST00000487633 BCE1O60756 84 aa3.13□□□□□ -1.91
COL4A3-206ENST00000487633 NPYP01303 97 aa3.13□□□□□ -1.91
COL4A3-206ENST00000487633 MT2AP02795 61 aa3.13□□□□□ -1.91
COL4A3-206ENST00000487633 MT1FP04733 61 aa3.13□□□□□ -1.91
COL4A3-206ENST00000487633 POLR2KP53803 58 aaKnown RBP3.13□□□□□ -1.91
COL4A3-206ENST00000487633 SMAGPQ0VAQ4 97 aa3.13□□□□□ -1.91
COL4A3-206ENST00000487633 KRTAP19-6Q3LI70 58 aa3.13□□□□□ -1.91
COL4A3-206ENST00000487633 COX19Q49B96 90 aa3.13□□□□□ -1.91
COL4A3-206ENST00000487633 FAM229BQ4G0N7 80 aa3.13□□□□□ -1.91
COL4A3-206ENST00000487633 C2orf82Q6UX34 121 aa3.13□□□□□ -1.91
COL4A3-206ENST00000487633 LINC00469Q8N7U9 141 aa3.13□□□□□ -1.91
COL4A3-206ENST00000487633 TMEM18Q96B42 140 aa3.13□□□□□ -1.91
COL4A3-206ENST00000487633 YPEL4Q96NS1 127 aa3.13□□□□□ -1.91
COL4A3-206ENST00000487633 MAP1LC3AQ9H492 121 aa3.13□□□□□ -1.91
COL4A3-206ENST00000487633 LAMTOR2Q9Y2Q5 125 aa3.13□□□□□ -1.91
COL4A3-206ENST00000487633 IGKV2D-26A0A0A0MRZ7 120 aa3.12□□□□□ -1.91
COL4A3-206ENST00000487633 TGIF2-C20orf24A0A0A6YYL0 155 aa3.12□□□□□ -1.91
COL4A3-206ENST00000487633 H7C423 109 aa3.12□□□□□ -1.91
COL4A3-206ENST00000487633 NUPR1O60356 82 aa3.12□□□□□ -1.91
COL4A3-206ENST00000487633 RPL28P46779 137 aaKnown RBP3.12□□□□□ -1.91
COL4A3-206ENST00000487633 FABP9Q0Z7S8 132 aa3.12□□□□□ -1.91
COL4A3-206ENST00000487633 KIAA0087Q14695 138 aa3.12□□□□□ -1.91
COL4A3-206ENST00000487633 KIAA1644Q3SXP7 199 aa3.12□□□□□ -1.91
COL4A3-206ENST00000487633 ORAOV1Q8WV07 137 aa3.12□□□□□ -1.91
COL4A3-206ENST00000487633 FAM104AQ969W3 186 aa3.12□□□□□ -1.91
COL4A3-206ENST00000487633 SMIM2Q9BVW6 85 aa3.12□□□□□ -1.91
COL4A3-206ENST00000487633 GNB1LQ9BYB4 327 aa3.12□□□□□ -1.91
COL4A3-206ENST00000487633 MRPL18Q9H0U6 180 aaKnown RBP3.12□□□□□ -1.91
COL4A3-206ENST00000487633 SMCO4Q9NRQ5 59 aa3.12□□□□□ -1.91
COL4A3-206ENST00000487633 TRAV13-1A0A0B4J241 112 aa3.11□□□□□ -1.91
COL4A3-206ENST00000487633 ZNF25P17030 456 aaPredicted RBP3.11□□□□□ -1.91
COL4A3-206ENST00000487633 RPL32P62910 135 aaKnown RBP3.11□□□□□ -1.91
COL4A3-206ENST00000487633 PRLHP81277 87 aa3.11□□□□□ -1.91
COL4A3-206ENST00000487633 XAGE1AQ9HD64 81 aa3.11□□□□□ -1.91
COL4A3-206ENST00000487633 TRAPPC1Q9Y5R8 145 aa3.11□□□□□ -1.91
COL4A3-206ENST00000487633 NDUFA1O15239 70 aa3.1□□□□□ -1.91
COL4A3-206ENST00000487633 IFI27P40305 119 aaPredicted RBP3.1□□□□□ -1.91
COL4A3-206ENST00000487633 RPL39P62891 51 aaKnown RBP3.1□□□□□ -1.91
COL4A3-206ENST00000487633 ORMDL2Q53FV1 153 aa3.1□□□□□ -1.91
COL4A3-206ENST00000487633 COX6B2Q6YFQ2 88 aa3.1□□□□□ -1.91
COL4A3-206ENST00000487633 FA2HQ7L5A8 372 aa3.1□□□□□ -1.91
COL4A3-206ENST00000487633 MRPL52Q86TS9 123 aaKnown RBP3.1□□□□□ -1.91
COL4A3-206ENST00000487633 Q8N8P6 123 aa3.1□□□□□ -1.91
COL4A3-206ENST00000487633 ALKBH7Q9BT30 221 aaPredicted RBP3.1□□□□□ -1.91
COL4A3-206ENST00000487633 NXT2Q9NPJ8 142 aaKnown RBP3.1□□□□□ -1.91
COL4A3-206ENST00000487633 SPANXA1Q9NS26 97 aa3.1□□□□□ -1.91
COL4A3-206ENST00000487633 UBE2D4Q9Y2X8 147 aa3.1□□□□□ -1.91
COL4A3-206ENST00000487633 GAGE10A6NGK3 116 aa3.09□□□□□ -1.91
COL4A3-206ENST00000487633 PRSS47A8MTI9 375 aa3.09□□□□□ -1.91
COL4A3-206ENST00000487633 K7EMI3 77 aa3.09□□□□□ -1.91
COL4A3-206ENST00000487633 CFC1P0CG37 223 aa3.09□□□□□ -1.91
COL4A3-206ENST00000487633 G0S2P27469 103 aa3.09□□□□□ -1.91
COL4A3-206ENST00000487633 Q6ZUT4 128 aa3.09□□□□□ -1.91
COL4A3-206ENST00000487633 Q8N377 158 aa3.09□□□□□ -1.91
COL4A3-206ENST00000487633 Q8NBF4 154 aa3.09□□□□□ -1.91
COL4A3-206ENST00000487633 LINC00167Q96N53 147 aa3.09□□□□□ -1.91
COL4A3-206ENST00000487633 CYSLTR1Q9Y271 337 aa3.09□□□□□ -1.91
COL4A3-206ENST00000487633 IGHV3OR16-9A0A0B4J2B5 98 aa3.08□□□□□ -1.92
COL4A3-206ENST00000487633 C9orf92A6NGG3 77 aa3.08□□□□□ -1.92
COL4A3-206ENST00000487633 IFITM10A6NMD0 228 aa3.08□□□□□ -1.92
COL4A3-206ENST00000487633 C1orf196B1AJZ1 125 aa3.08□□□□□ -1.92
COL4A3-206ENST00000487633 CTAG1AP78358 180 aa3.08□□□□□ -1.92
COL4A3-206ENST00000487633 C2orf66Q6UXQ4 117 aa3.08□□□□□ -1.92
COL4A3-206ENST00000487633 Q6ZN92 141 aa3.08□□□□□ -1.92
COL4A3-206ENST00000487633 MRPL55Q7Z7F7 128 aaKnown RBP3.08□□□□□ -1.92
COL4A3-206ENST00000487633 OR10D4PQ8NGN7 298 aa3.08□□□□□ -1.92
COL4A3-206ENST00000487633 TIMM21Q9BVV7 248 aa3.08□□□□□ -1.92
COL4A3-206ENST00000487633 CSDC2Q9Y534 153 aaKnown RBP3.08□□□□□ -1.92
COL4A3-206ENST00000487633 NDUFC2-KCTD14E9PQ53 114 aa3.07□□□□□ -1.92
COL4A3-206ENST00000487633 TRGC2P03986 189 aa3.07□□□□□ -1.92
COL4A3-206ENST00000487633 RAB5BP61020 215 aa3.07□□□□□ -1.92
COL4A3-206ENST00000487633 MRPS36P82909 103 aaKnown RBP3.07□□□□□ -1.92
COL4A3-206ENST00000487633 PAPPA-AS1Q5QFB9 102 aa3.07□□□□□ -1.92
COL4A3-206ENST00000487633 TEX43Q6ZNM6 134 aa3.07□□□□□ -1.92
COL4A3-206ENST00000487633 BAGE3Q86Y29 109 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms