RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 A0A096LNI7 61 aa12.5□□□□□ -0.41
SEC22A-208ENST00000487572 ZNF22P17026 224 aaPredicted RBP12.5□□□□□ -0.41
SEC22A-208ENST00000487572 CKS1BP61024 79 aa12.5□□□□□ -0.41
SEC22A-208ENST00000487572 Q8IZM0 81 aa12.5□□□□□ -0.41
SEC22A-208ENST00000487572 KRTAP17-1Q9BYP8 105 aa12.5□□□□□ -0.41
SEC22A-208ENST00000487572 MRPL35Q9NZE8 188 aaKnown RBP12.5□□□□□ -0.41
SEC22A-208ENST00000487572 PKIGQ9Y2B9 76 aa12.5□□□□□ -0.41
SEC22A-208ENST00000487572 LOC107984640A0A0U1RRK4 108 aa12.49□□□□□ -0.41
SEC22A-208ENST00000487572 TMEM170BQ5T4T1 132 aa12.49□□□□□ -0.41
SEC22A-208ENST00000487572 C6orf48Q9UBA6 75 aa12.49□□□□□ -0.41
SEC22A-208ENST00000487572 RPL18AQ02543 176 aaKnown RBP12.48□□□□□ -0.41
SEC22A-208ENST00000487572 GAGE2BQ13066 116 aa12.48□□□□□ -0.41
SEC22A-208ENST00000487572 MAJINQ3KP22 176 aa12.48□□□□□ -0.41
SEC22A-208ENST00000487572 SPACA4Q8TDM5 124 aa12.48□□□□□ -0.41
SEC22A-208ENST00000487572 COX7B2Q8TF08 81 aa12.48□□□□□ -0.41
SEC22A-208ENST00000487572 F8VRH5 84 aa12.47□□□□□ -0.41
SEC22A-208ENST00000487572 RNF151Q2KHN1 245 aa12.47□□□□□ -0.41
SEC22A-208ENST00000487572 Q8N1X5 172 aa12.47□□□□□ -0.41
SEC22A-208ENST00000487572 CIRBPQ14011 172 aaKnown RBP12.46□□□□□ -0.41
SEC22A-208ENST00000487572 ODF1Q14990 250 aa12.45□□□□□ -0.42
SEC22A-208ENST00000487572 A0A087WYN8 130 aa12.44□□□□□ -0.42
SEC22A-208ENST00000487572 TRBV30A0A0K0K1B3 111 aa12.44□□□□□ -0.42
SEC22A-208ENST00000487572 PTTG1IPP53801 180 aa12.44□□□□□ -0.42
SEC22A-208ENST00000487572 C9orf116Q5BN46 136 aaPredicted RBP12.44□□□□□ -0.42
SEC22A-208ENST00000487572 COA6Q5JTJ3 125 aaKnown RBP12.44□□□□□ -0.42
SEC22A-208ENST00000487572 MAP1LC3CQ9BXW4 147 aa12.44□□□□□ -0.42
SEC22A-208ENST00000487572 LINC00474Q9P2X8 69 aa12.43□□□□□ -0.42
SEC22A-208ENST00000487572 IGLV5-39A0A0G2JS06 123 aa12.42□□□□□ -0.42
SEC22A-208ENST00000487572 CXCL5P42830 114 aa12.42□□□□□ -0.42
SEC22A-208ENST00000487572 LINC00528Q8N1L1 170 aa12.42□□□□□ -0.42
SEC22A-208ENST00000487572 STPG4Q8N801 248 aa12.42□□□□□ -0.42
SEC22A-208ENST00000487572 PMCHL2Q9BQD1 86 aa12.42□□□□□ -0.42
SEC22A-208ENST00000487572 Q5VSD8 79 aa12.41□□□□□ -0.42
SEC22A-208ENST00000487572 KRTAP4-5Q9BYR2 181 aa12.41□□□□□ -0.42
SEC22A-208ENST00000487572 EPM2AB3EWF7 344 aa12.4□□□□□ -0.42
SEC22A-208ENST00000487572 GAGE2EQ4V326 116 aa12.4□□□□□ -0.42
SEC22A-208ENST00000487572 GAGE2DQ9UEU5 116 aa12.4□□□□□ -0.42
SEC22A-208ENST00000487572 TMEM223A0PJW6 202 aa12.39□□□□□ -0.43
SEC22A-208ENST00000487572 FAM229AH3BQW9 127 aa12.39□□□□□ -0.43
SEC22A-208ENST00000487572 TLX1NBP0CAT3 122 aa12.39□□□□□ -0.43
SEC22A-208ENST00000487572 Q6ZRP5 223 aa12.39□□□□□ -0.43
SEC22A-208ENST00000487572 PLAC8Q9NZF1 115 aa12.39□□□□□ -0.43
SEC22A-208ENST00000487572 PLNP26678 52 aa12.38□□□□□ -0.43
SEC22A-208ENST00000487572 NDUFC2-KCTD14E9PQ53 114 aa12.37□□□□□ -0.43
SEC22A-208ENST00000487572 SYS1-DBNDD2H3BUS1 97 aa12.37□□□□□ -0.43
SEC22A-208ENST00000487572 DPM2O94777 84 aa12.37□□□□□ -0.43
SEC22A-208ENST00000487572 IGKCP01834 107 aa12.35□□□□□ -0.43
SEC22A-208ENST00000487572 A0A1W2PNN7 141 aa12.33□□□□□ -0.44
SEC22A-208ENST00000487572 C3orf79P0CE67 100 aa12.33□□□□□ -0.44
SEC22A-208ENST00000487572 KRTDAPP60985 99 aa12.33□□□□□ -0.44
SEC22A-208ENST00000487572 S100A6P06703 90 aa12.32□□□□□ -0.44
SEC22A-208ENST00000487572 ZNF625Q96I27 306 aaPredicted RBP12.32□□□□□ -0.44
SEC22A-208ENST00000487572 FAM168BA1KXE4 195 aa12.31□□□□□ -0.44
SEC22A-208ENST00000487572 PLA2G1BP04054 148 aaKnown RBP12.31□□□□□ -0.44
SEC22A-208ENST00000487572 PET117Q6UWS5 81 aa12.31□□□□□ -0.44
SEC22A-208ENST00000487572 C9orf129Q5T035 196 aaKnown RBP12.3□□□□□ -0.44
SEC22A-208ENST00000487572 LINC01545Q5VT33 79 aa12.3□□□□□ -0.44
SEC22A-208ENST00000487572 FAM19A5Q7Z5A7 132 aaPredicted RBP12.3□□□□□ -0.44
SEC22A-208ENST00000487572 XAGE1AQ9HD64 81 aa12.3□□□□□ -0.44
SEC22A-208ENST00000487572 S100A2P29034 98 aa12.29□□□□□ -0.44
SEC22A-208ENST00000487572 PFN2P35080 140 aa12.29□□□□□ -0.44
SEC22A-208ENST00000487572 RPL37AP61513 92 aaKnown RBP12.29□□□□□ -0.44
SEC22A-208ENST00000487572 HERVK_113P61574 105 aa12.29□□□□□ -0.44
SEC22A-208ENST00000487572 HIST3H2BBQ8N257 126 aa12.29□□□□□ -0.44
SEC22A-208ENST00000487572 C7orf33Q8WU49 177 aa12.29□□□□□ -0.44
SEC22A-208ENST00000487572 FAT1Q14517 4588 aa12.29□□□□□ -0.44
SEC22A-208ENST00000487572 SFTA2Q6UW10 78 aa12.28□□□□□ -0.44
SEC22A-208ENST00000487572 ERG28Q9UKR5 140 aa12.28□□□□□ -0.44
SEC22A-208ENST00000487572 LEPROTO15243 131 aa12.27□□□□□ -0.45
SEC22A-208ENST00000487572 TSPEAR-AS2P59090 65 aa12.26□□□□□ -0.45
SEC22A-208ENST00000487572 PLEKHB2Q96CS7 222 aa12.26□□□□□ -0.45
SEC22A-208ENST00000487572 PHF5AQ7RTV0 110 aaKnown RBP12.25□□□□□ -0.45
SEC22A-208ENST00000487572 HIST1H2BLQ99880 126 aa12.25□□□□□ -0.45
SEC22A-208ENST00000487572 NDUFA12Q9UI09 145 aa12.25□□□□□ -0.45
SEC22A-208ENST00000487572 C20orf202A1L168 122 aa12.24□□□□□ -0.45
SEC22A-208ENST00000487572 SNRPEP62304 92 aaKnown RBP12.24□□□□□ -0.45
SEC22A-208ENST00000487572 J3QQQ9 107 aa12.23□□□□□ -0.45
SEC22A-208ENST00000487572 KRTAP7-1Q8IUC3 87 aa12.23□□□□□ -0.45
SEC22A-208ENST00000487572 VPS13BQ7Z7G8 4022 aa12.22□□□□□ -0.45
SEC22A-208ENST00000487572 A0A0U1RRA0 63 aa12.22□□□□□ -0.45
SEC22A-208ENST00000487572 MYMXA0A1B0GTQ4 84 aa12.22□□□□□ -0.45
SEC22A-208ENST00000487572 M0QXV9 152 aa12.22□□□□□ -0.45
SEC22A-208ENST00000487572 INAFM2P0DMQ5 153 aa12.22□□□□□ -0.45
SEC22A-208ENST00000487572 LGALS3P17931 250 aaKnown RBP12.22□□□□□ -0.45
SEC22A-208ENST00000487572 LINC00158P58513 81 aa12.22□□□□□ -0.45
SEC22A-208ENST00000487572 KRTAP10-4P60372 401 aaPredicted RBP12.22□□□□□ -0.45
SEC22A-208ENST00000487572 SERTAD4-AS1Q5TG53 156 aa12.22□□□□□ -0.45
SEC22A-208ENST00000487572 COX17Q14061 63 aa12.21□□□□□ -0.45
SEC22A-208ENST00000487572 MEIG1Q5JSS6 88 aa12.21□□□□□ -0.45
SEC22A-208ENST00000487572 ABCA13Q86UQ4 5058 aa12.2□□□□□ -0.46
SEC22A-208ENST00000487572 E9PLD3 99 aa12.2□□□□□ -0.46
SEC22A-208ENST00000487572 HERV-K104P63124 156 aa12.2□□□□□ -0.46
SEC22A-208ENST00000487572 SMIM13P0DJ93 91 aa12.19□□□□□ -0.46
SEC22A-208ENST00000487572 ATOH7Q8N100 152 aa12.19□□□□□ -0.46
SEC22A-208ENST00000487572 SND1-IT1Q9HBX3 110 aa12.19□□□□□ -0.46
SEC22A-208ENST00000487572 SRRM2Q9UQ35 2752 aaKnown RBP12.18□□□□□ -0.46
SEC22A-208ENST00000487572 C5orf52A6NGY3 159 aa12.17□□□□□ -0.46
SEC22A-208ENST00000487572 NMUP48645 174 aa12.17□□□□□ -0.46
SEC22A-208ENST00000487572 PRR3P79522 188 aaKnown RBP12.17□□□□□ -0.46
SEC22A-208ENST00000487572 UBE2BP63146 152 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms