RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 TOMM7Q9P0U1 55 aa6.9□□□□□ -1.3
TOP3B-216ENST00000487485 SMIM1B2RUZ4 78 aa6.89□□□□□ -1.31
TOP3B-216ENST00000487485 PRSS2P07478 247 aa6.89□□□□□ -1.31
TOP3B-216ENST00000487485 SPINK8P0C7L1 97 aa6.89□□□□□ -1.31
TOP3B-216ENST00000487485 HAMPP81172 84 aa6.89□□□□□ -1.31
TOP3B-216ENST00000487485 SYCNQ0VAF6 134 aa6.89□□□□□ -1.31
TOP3B-216ENST00000487485 TMEM170BQ5T4T1 132 aa6.89□□□□□ -1.31
TOP3B-216ENST00000487485 Q6ZRU5 148 aa6.89□□□□□ -1.31
TOP3B-216ENST00000487485 DNAH8Q96JB1 4490 aa6.89□□□□□ -1.31
TOP3B-216ENST00000487485 F8WDY8 70 aa6.88□□□□□ -1.31
TOP3B-216ENST00000487485 SYS1-DBNDD2H3BUS1 97 aa6.88□□□□□ -1.31
TOP3B-216ENST00000487485 C6orf226Q5I0X4 101 aa6.88□□□□□ -1.31
TOP3B-216ENST00000487485 CARD19Q96LW7 228 aa6.88□□□□□ -1.31
TOP3B-216ENST00000487485 FAM229AH3BQW9 127 aa6.87□□□□□ -1.31
TOP3B-216ENST00000487485 NDUFA1O15239 70 aa6.87□□□□□ -1.31
TOP3B-216ENST00000487485 S100A2P29034 98 aa6.87□□□□□ -1.31
TOP3B-216ENST00000487485 SNRPEP62304 92 aaKnown RBP6.87□□□□□ -1.31
TOP3B-216ENST00000487485 UNQ6190/PRO20217Q6UXQ8 127 aa6.87□□□□□ -1.31
TOP3B-216ENST00000487485 Q8IZM0 81 aa6.87□□□□□ -1.31
TOP3B-216ENST00000487485 HIST3H2BBQ8N257 126 aa6.87□□□□□ -1.31
TOP3B-216ENST00000487485 PMCHL2Q9BQD1 86 aa6.87□□□□□ -1.31
TOP3B-216ENST00000487485 TMEM223A0PJW6 202 aa6.86□□□□□ -1.31
TOP3B-216ENST00000487485 DPM2O94777 84 aa6.86□□□□□ -1.31
TOP3B-216ENST00000487485 C3orf79P0CE67 100 aa6.86□□□□□ -1.31
TOP3B-216ENST00000487485 PLNP26678 52 aa6.86□□□□□ -1.31
TOP3B-216ENST00000487485 CKS1BP61024 79 aa6.86□□□□□ -1.31
TOP3B-216ENST00000487485 C10orf25Q5T742 122 aa6.86□□□□□ -1.31
TOP3B-216ENST00000487485 C2orf82Q6UX34 121 aa6.86□□□□□ -1.31
TOP3B-216ENST00000487485 SDIM1Q6ZPB5 146 aa6.86□□□□□ -1.31
TOP3B-216ENST00000487485 COX7B2Q8TF08 81 aa6.86□□□□□ -1.31
TOP3B-216ENST00000487485 FAM30AQ9NZY2 134 aa6.86□□□□□ -1.31
TOP3B-216ENST00000487485 LRP1Q07954 4544 aaKnown RBP6.86□□□□□ -1.31
TOP3B-216ENST00000487485 IGLV5-39A0A0G2JS06 123 aa6.85□□□□□ -1.31
TOP3B-216ENST00000487485 C5orf52A6NGY3 159 aa6.85□□□□□ -1.31
TOP3B-216ENST00000487485 IGKCP01834 107 aa6.85□□□□□ -1.31
TOP3B-216ENST00000487485 KRTDAPP60985 99 aa6.85□□□□□ -1.31
TOP3B-216ENST00000487485 PET117Q6UWS5 81 aa6.85□□□□□ -1.31
TOP3B-216ENST00000487485 RNF151Q2KHN1 245 aa6.84□□□□□ -1.31
TOP3B-216ENST00000487485 LINC01545Q5VT33 79 aa6.84□□□□□ -1.31
TOP3B-216ENST00000487485 HIST1H2BLQ99880 126 aa6.84□□□□□ -1.31
TOP3B-216ENST00000487485 C6orf48Q9UBA6 75 aa6.84□□□□□ -1.31
TOP3B-216ENST00000487485 TRBV30A0A0K0K1B3 111 aa6.83□□□□□ -1.32
TOP3B-216ENST00000487485 CXCL5P42830 114 aa6.83□□□□□ -1.32
TOP3B-216ENST00000487485 Q6ZSA8 131 aa6.83□□□□□ -1.32
TOP3B-216ENST00000487485 PKIGQ9Y2B9 76 aa6.83□□□□□ -1.32
TOP3B-216ENST00000487485 LOC107984640A0A0U1RRK4 108 aa6.82□□□□□ -1.32
TOP3B-216ENST00000487485 KRTAP29-1A8MX34 341 aaPredicted RBP6.82□□□□□ -1.32
TOP3B-216ENST00000487485 DPH3Q96FX2 82 aa6.82□□□□□ -1.32
TOP3B-216ENST00000487485 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.82□□□□□ -1.32
TOP3B-216ENST00000487485 A0A096LNI7 61 aa6.81□□□□□ -1.32
TOP3B-216ENST00000487485 IGKV2-24A0A0C4DH68 120 aa6.81□□□□□ -1.32
TOP3B-216ENST00000487485 PANO1I0J062 215 aa6.81□□□□□ -1.32
TOP3B-216ENST00000487485 CHTF8P0CG12 524 aa6.81□□□□□ -1.32
TOP3B-216ENST00000487485 C9orf116Q5BN46 136 aaPredicted RBP6.81□□□□□ -1.32
TOP3B-216ENST00000487485 FAT3Q8TDW7 4589 aa6.81□□□□□ -1.32
TOP3B-216ENST00000487485 C20orf202A1L168 122 aa6.8□□□□□ -1.32
TOP3B-216ENST00000487485 TLX1NBP0CAT3 122 aa6.8□□□□□ -1.32
TOP3B-216ENST00000487485 HERVK_113P61574 105 aa6.8□□□□□ -1.32
TOP3B-216ENST00000487485 RPL18AQ02543 176 aaKnown RBP6.8□□□□□ -1.32
TOP3B-216ENST00000487485 GAGE2BQ13066 116 aa6.8□□□□□ -1.32
TOP3B-216ENST00000487485 LEPROTO15243 131 aa6.79□□□□□ -1.32
TOP3B-216ENST00000487485 PTTG1IPP53801 180 aa6.79□□□□□ -1.32
TOP3B-216ENST00000487485 CIRBPQ14011 172 aaKnown RBP6.79□□□□□ -1.32
TOP3B-216ENST00000487485 MAJINQ3KP22 176 aa6.79□□□□□ -1.32
TOP3B-216ENST00000487485 SERTAD4-AS1Q5TG53 156 aa6.79□□□□□ -1.32
TOP3B-216ENST00000487485 Q6ZRP5 223 aa6.79□□□□□ -1.32
TOP3B-216ENST00000487485 SCXQ7RTU7 201 aa6.79□□□□□ -1.32
TOP3B-216ENST00000487485 SPACA4Q8TDM5 124 aa6.79□□□□□ -1.32
TOP3B-216ENST00000487485 TMA7Q9Y2S6 64 aaKnown RBP6.79□□□□□ -1.32
TOP3B-216ENST00000487485 NDUFC2-KCTD14E9PQ53 114 aa6.78□□□□□ -1.32
TOP3B-216ENST00000487485 GAGE2EQ4V326 116 aa6.78□□□□□ -1.32
TOP3B-216ENST00000487485 SFTA2Q6UW10 78 aa6.78□□□□□ -1.32
TOP3B-216ENST00000487485 STPG4Q8N801 248 aa6.78□□□□□ -1.32
TOP3B-216ENST00000487485 CIRBP-AS1Q8TBR5 109 aa6.78□□□□□ -1.32
TOP3B-216ENST00000487485 PLEKHB2Q96CS7 222 aa6.78□□□□□ -1.32
TOP3B-216ENST00000487485 ZNF625Q96I27 306 aaPredicted RBP6.78□□□□□ -1.32
TOP3B-216ENST00000487485 LINC00474Q9P2X8 69 aa6.78□□□□□ -1.32
TOP3B-216ENST00000487485 GAGE2DQ9UEU5 116 aa6.78□□□□□ -1.32
TOP3B-216ENST00000487485 A0A087WYN8 130 aa6.77□□□□□ -1.33
TOP3B-216ENST00000487485 J3QQQ9 107 aa6.77□□□□□ -1.33
TOP3B-216ENST00000487485 AKR1D1P51857 326 aa6.77□□□□□ -1.33
TOP3B-216ENST00000487485 E9PLD3 99 aa6.76□□□□□ -1.33
TOP3B-216ENST00000487485 LGALS3P17931 250 aaKnown RBP6.76□□□□□ -1.33
TOP3B-216ENST00000487485 PFN2P35080 140 aa6.76□□□□□ -1.33
TOP3B-216ENST00000487485 TSPEAR-AS2P59090 65 aa6.76□□□□□ -1.33
TOP3B-216ENST00000487485 ATOH7Q8N100 152 aa6.76□□□□□ -1.33
TOP3B-216ENST00000487485 NDUFA12Q9UI09 145 aa6.76□□□□□ -1.33
TOP3B-216ENST00000487485 RNF213Q63HN8 5207 aa6.76□□□□□ -1.33
TOP3B-216ENST00000487485 MYMXA0A1B0GTQ4 84 aa6.75□□□□□ -1.33
TOP3B-216ENST00000487485 PLA2G1BP04054 148 aaKnown RBP6.75□□□□□ -1.33
TOP3B-216ENST00000487485 ERG28Q9UKR5 140 aa6.75□□□□□ -1.33
TOP3B-216ENST00000487485 SCGB1D1O95968 90 aa6.74□□□□□ -1.33
TOP3B-216ENST00000487485 NMUP48645 174 aa6.74□□□□□ -1.33
TOP3B-216ENST00000487485 HERV-K104P63124 156 aa6.74□□□□□ -1.33
TOP3B-216ENST00000487485 COX17Q14061 63 aa6.74□□□□□ -1.33
TOP3B-216ENST00000487485 PLAC8Q9NZF1 115 aa6.74□□□□□ -1.33
TOP3B-216ENST00000487485 PLA2G2DQ9UNK4 145 aa6.74□□□□□ -1.33
TOP3B-216ENST00000487485 IGKV2D-26A0A0A0MRZ7 120 aa6.73□□□□□ -1.33
TOP3B-216ENST00000487485 A0A1W2PNN7 141 aa6.73□□□□□ -1.33
TOP3B-216ENST00000487485 C9orf129Q5T035 196 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms