RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 MIFP14174 115 aa18.09■□□□□ 0.49
HLA-C-208ENST00000487245 IGHV4-28A0A0C4DH34 117 aa18.08■□□□□ 0.49
HLA-C-208ENST00000487245 CCL18P55774 89 aa18.08■□□□□ 0.49
HLA-C-208ENST00000487245 C2CD3Q4AC94 2353 aa18.08■□□□□ 0.48
HLA-C-208ENST00000487245 DAD1P61803 113 aa18.07■□□□□ 0.48
HLA-C-208ENST00000487245 FAM218AQ96MZ4 157 aa18.07■□□□□ 0.48
HLA-C-208ENST00000487245 WIPF1O43516 503 aa18.07■□□□□ 0.48
HLA-C-208ENST00000487245 C5orf38Q86SI9 138 aa18.07■□□□□ 0.48
HLA-C-208ENST00000487245 TRAV26-1A0A087WT03 109 aa18.06■□□□□ 0.48
HLA-C-208ENST00000487245 BAALC-AS2P0C853 105 aa18.05■□□□□ 0.48
HLA-C-208ENST00000487245 ANAPC13Q9BS18 74 aa18.05■□□□□ 0.48
HLA-C-208ENST00000487245 FLNBO75369 2602 aaKnown RBP18.05■□□□□ 0.48
HLA-C-208ENST00000487245 C22orf24Q9Y442 160 aa18.03■□□□□ 0.48
HLA-C-208ENST00000487245 OTOGQ6ZRI0 2925 aa18.03■□□□□ 0.48
HLA-C-208ENST00000487245 FN1P02751 2386 aaKnown RBP18.03■□□□□ 0.48
HLA-C-208ENST00000487245 ATP5G1P05496 136 aa18.03■□□□□ 0.48
HLA-C-208ENST00000487245 Q8IZM0 81 aa18.03■□□□□ 0.48
HLA-C-208ENST00000487245 Q8NAQ8 132 aa18.02■□□□□ 0.48
HLA-C-208ENST00000487245 H0YGX0 51 aa18.01■□□□□ 0.47
HLA-C-208ENST00000487245 SMIM11BQ8TCY0 68 aa18.01■□□□□ 0.47
HLA-C-208ENST00000487245 DEFB4AO15263 64 aa18■□□□□ 0.47
HLA-C-208ENST00000487245 SPART-AS1P0CW21 52 aa18■□□□□ 0.47
HLA-C-208ENST00000487245 NDUFV3P56181 108 aaKnown RBP18■□□□□ 0.47
HLA-C-208ENST00000487245 C6orf226Q5I0X4 101 aa18■□□□□ 0.47
HLA-C-208ENST00000487245 A0A096LPF7 62 aa17.99■□□□□ 0.47
HLA-C-208ENST00000487245 BAHCC1Q9P281 2608 aa17.98■□□□□ 0.47
HLA-C-208ENST00000487245 TRBV7-7A0A0K0K1E9 115 aa17.98■□□□□ 0.47
HLA-C-208ENST00000487245 NHLRC4P0CG21 123 aaPredicted RBP17.98■□□□□ 0.47
HLA-C-208ENST00000487245 XCL1P47992 114 aa17.98■□□□□ 0.47
HLA-C-208ENST00000487245 TTC32Q5I0X7 151 aa17.98■□□□□ 0.47
HLA-C-208ENST00000487245 PFN2P35080 140 aa17.97■□□□□ 0.47
HLA-C-208ENST00000487245 INAFM2P0DMQ5 153 aa17.96■□□□□ 0.47
HLA-C-208ENST00000487245 IGHV4-30-4P0DP06 118 aa17.96■□□□□ 0.47
HLA-C-208ENST00000487245 MALP21145 153 aa17.96■□□□□ 0.47
HLA-C-208ENST00000487245 NSD1Q96L73 2696 aaPredicted RBP17.96■□□□□ 0.46
HLA-C-208ENST00000487245 SDIM1Q6ZPB5 146 aa17.95■□□□□ 0.46
HLA-C-208ENST00000487245 CELA1Q9UNI1 258 aa17.95■□□□□ 0.46
HLA-C-208ENST00000487245 CD164L2Q6UWJ8 174 aa17.93■□□□□ 0.46
HLA-C-208ENST00000487245 LINC00269Q8N2A0 174 aa17.91■□□□□ 0.46
HLA-C-208ENST00000487245 IMUPQ9GZP8 106 aa17.91■□□□□ 0.46
HLA-C-208ENST00000487245 CXCL5P42830 114 aa17.9■□□□□ 0.46
HLA-C-208ENST00000487245 Q9HAA7 133 aa17.9■□□□□ 0.46
HLA-C-208ENST00000487245 CLPSL2Q6UWE3 100 aa17.9■□□□□ 0.46
HLA-C-208ENST00000487245 A0A087WYN8 130 aa17.89■□□□□ 0.45
HLA-C-208ENST00000487245 DNAL4O96015 105 aa17.89■□□□□ 0.45
HLA-C-208ENST00000487245 ANGP03950 147 aaKnown RBP17.88■□□□□ 0.45
HLA-C-208ENST00000487245 COX17Q14061 63 aa17.88■□□□□ 0.45
HLA-C-208ENST00000487245 KIAA0087Q14695 138 aa17.88■□□□□ 0.45
HLA-C-208ENST00000487245 LELP1Q5T871 98 aa17.88■□□□□ 0.45
HLA-C-208ENST00000487245 LINC00643Q86TS7 51 aa17.88■□□□□ 0.45
HLA-C-208ENST00000487245 REG3AQ06141 175 aa17.88■□□□□ 0.45
HLA-C-208ENST00000487245 CHCHD10Q8WYQ3 142 aaPredicted RBP17.87■□□□□ 0.45
HLA-C-208ENST00000487245 C11orf68Q9H3H3 251 aaKnown RBP17.86■□□□□ 0.45
HLA-C-208ENST00000487245 NDUFC2O95298 119 aa17.86■□□□□ 0.45
HLA-C-208ENST00000487245 OBSCN-AS1Q96MR7 158 aa17.86■□□□□ 0.45
HLA-C-208ENST00000487245 HIVEP1P15822 2718 aa17.85■□□□□ 0.45
HLA-C-208ENST00000487245 CFAP161Q6P656 301 aa17.84■□□□□ 0.45
HLA-C-208ENST00000487245 HTN3P15516 51 aa17.84■□□□□ 0.45
HLA-C-208ENST00000487245 OR13C6PQ8NH95 151 aa17.84■□□□□ 0.45
HLA-C-208ENST00000487245 SMCR5Q8TEV8 140 aa17.84■□□□□ 0.45
HLA-C-208ENST00000487245 A0A1B0GX51 115 aa17.81■□□□□ 0.44
HLA-C-208ENST00000487245 VWFP04275 2813 aa17.8■□□□□ 0.44
HLA-C-208ENST00000487245 LECT2O14960 151 aa17.8■□□□□ 0.44
HLA-C-208ENST00000487245 LINC00167Q96N53 147 aa17.8■□□□□ 0.44
HLA-C-208ENST00000487245 NANOS2P60321 138 aaKnown RBP17.77■□□□□ 0.43
HLA-C-208ENST00000487245 MUC7Q8TAX7 377 aa17.77■□□□□ 0.43
HLA-C-208ENST00000487245 CYSRT1A8MQ03 144 aa17.76■□□□□ 0.43
HLA-C-208ENST00000487245 Q8N3U1 123 aa17.76■□□□□ 0.43
HLA-C-208ENST00000487245 IGLV10-54A0A075B6I4 117 aa17.75■□□□□ 0.43
HLA-C-208ENST00000487245 GAGE2AQ6NT46 116 aa17.75■□□□□ 0.43
HLA-C-208ENST00000487245 KLK5Q9Y337 293 aaPredicted RBP17.75■□□□□ 0.43
HLA-C-208ENST00000487245 TEP1Q99973 2627 aaKnown RBP17.75■□□□□ 0.43
HLA-C-208ENST00000487245 H3BNG1 76 aa17.74■□□□□ 0.43
HLA-C-208ENST00000487245 PRR34Q9NV39 138 aa17.73■□□□□ 0.43
HLA-C-208ENST00000487245 NBEAL2Q6ZNJ1 2754 aa17.73■□□□□ 0.43
HLA-C-208ENST00000487245 TENM1Q9UKZ4 2725 aa17.73■□□□□ 0.43
HLA-C-208ENST00000487245 OXLD1Q5BKU9 147 aa17.73■□□□□ 0.43
HLA-C-208ENST00000487245 TMEM126AQ9H061 195 aa17.73■□□□□ 0.43
HLA-C-208ENST00000487245 ORMDL1Q9P0S3 153 aa17.73■□□□□ 0.43
HLA-C-208ENST00000487245 LYPD5Q6UWN5 251 aa17.71■□□□□ 0.43
HLA-C-208ENST00000487245 CCDC179H3BU77 68 aa17.71■□□□□ 0.43
HLA-C-208ENST00000487245 KRTAP10-11P60412 298 aa17.71■□□□□ 0.43
HLA-C-208ENST00000487245 EGFEM1PQ0D2K5 195 aa17.71■□□□□ 0.43
HLA-C-208ENST00000487245 C9orf129Q5T035 196 aaKnown RBP17.71■□□□□ 0.43
HLA-C-208ENST00000487245 ATRQ13535 2644 aa17.7■□□□□ 0.42
HLA-C-208ENST00000487245 F8P00451 2351 aa17.69■□□□□ 0.42
HLA-C-208ENST00000487245 C14orf132Q9NPU4 83 aa17.68■□□□□ 0.42
HLA-C-208ENST00000487245 KLK12Q9UKR0 248 aa17.68■□□□□ 0.42
HLA-C-208ENST00000487245 B5MCH6 92 aa17.67■□□□□ 0.42
HLA-C-208ENST00000487245 PRR3P79522 188 aaKnown RBP17.66■□□□□ 0.42
HLA-C-208ENST00000487245 KRTAP24-1Q3LI83 254 aa17.66■□□□□ 0.42
HLA-C-208ENST00000487245 Q8N814 137 aa17.66■□□□□ 0.42
HLA-C-208ENST00000487245 A0A0J9YWU9 116 aa17.65■□□□□ 0.42
HLA-C-208ENST00000487245 SPAG11BQ08648 103 aa17.65■□□□□ 0.42
HLA-C-208ENST00000487245 FAM236AA0A1B0GUQ0 79 aa17.65■□□□□ 0.42
HLA-C-208ENST00000487245 FAM236BA0A1B0GV22 79 aa17.65■□□□□ 0.42
HLA-C-208ENST00000487245 SLPIP03973 132 aa17.65■□□□□ 0.42
HLA-C-208ENST00000487245 C9orf116Q5BN46 136 aaPredicted RBP17.64■□□□□ 0.41
HLA-C-208ENST00000487245 ENHOQ6UWT2 76 aa17.64■□□□□ 0.41
HLA-C-208ENST00000487245 C3orf56Q8N813 242 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms