RNA–Protein interactions for RNA: ENST00000487006.2

BUD23-217, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, humanhuman

TSL 3

Gene BUD23, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD23-217ENST00000487006 PRSS2P07478 247 aa13.54□□□□□ -0.24
BUD23-217ENST00000487006 BAGE3Q86Y29 109 aa13.54□□□□□ -0.24
BUD23-217ENST00000487006 SMIM1B2RUZ4 78 aa13.53□□□□□ -0.24
BUD23-217ENST00000487006 ATP5LO75964 103 aa13.52□□□□□ -0.25
BUD23-217ENST00000487006 Q8IZM0 81 aa13.52□□□□□ -0.25
BUD23-217ENST00000487006 PKHD1L1Q86WI1 4243 aa13.51□□□□□ -0.25
BUD23-217ENST00000487006 SPINK8P0C7L1 97 aa13.51□□□□□ -0.25
BUD23-217ENST00000487006 IGLC3P0DOY3 106 aa13.51□□□□□ -0.25
BUD23-217ENST00000487006 TRBV30A0A0K0K1B3 111 aa13.5□□□□□ -0.25
BUD23-217ENST00000487006 LINC00310P59036 64 aa13.5□□□□□ -0.25
BUD23-217ENST00000487006 C9orf116Q5BN46 136 aaPredicted RBP13.5□□□□□ -0.25
BUD23-217ENST00000487006 C6orf226Q5I0X4 101 aa13.5□□□□□ -0.25
BUD23-217ENST00000487006 Q6ZRP5 223 aa13.5□□□□□ -0.25
BUD23-217ENST00000487006 FAM19A2Q8N3H0 131 aa13.5□□□□□ -0.25
BUD23-217ENST00000487006 A0A1W2PNN7 141 aa13.49□□□□□ -0.25
BUD23-217ENST00000487006 HSBP1O75506 76 aa13.49□□□□□ -0.25
BUD23-217ENST00000487006 CKS1BP61024 79 aa13.49□□□□□ -0.25
BUD23-217ENST00000487006 SERF1AO75920 110 aa13.48□□□□□ -0.25
BUD23-217ENST00000487006 TLX1NBP0CAT3 122 aa13.48□□□□□ -0.25
BUD23-217ENST00000487006 HNRNPA3P51991 378 aaKnown RBP13.47□□□□□ -0.25
BUD23-217ENST00000487006 GAGE2EQ4V326 116 aa13.47□□□□□ -0.25
BUD23-217ENST00000487006 COX7B2Q8TF08 81 aa13.47□□□□□ -0.25
BUD23-217ENST00000487006 C7orf33Q8WU49 177 aa13.47□□□□□ -0.25
BUD23-217ENST00000487006 GAGE2DQ9UEU5 116 aa13.47□□□□□ -0.25
BUD23-217ENST00000487006 DMBT1Q9UGM3 2413 aaPredicted RBP13.47□□□□□ -0.25
BUD23-217ENST00000487006 ZNF22P17026 224 aaPredicted RBP13.46□□□□□ -0.25
BUD23-217ENST00000487006 C11orf86A6NJI1 115 aa13.45□□□□□ -0.26
BUD23-217ENST00000487006 H3BRM9 83 aa13.45□□□□□ -0.26
BUD23-217ENST00000487006 IFI27L1Q96BM0 104 aa13.45□□□□□ -0.26
BUD23-217ENST00000487006 FAM168BA1KXE4 195 aa13.44□□□□□ -0.26
BUD23-217ENST00000487006 NUPR1O60356 82 aa13.44□□□□□ -0.26
BUD23-217ENST00000487006 NDUFC2-KCTD14E9PQ53 114 aa13.43□□□□□ -0.26
BUD23-217ENST00000487006 F8VRH5 84 aa13.43□□□□□ -0.26
BUD23-217ENST00000487006 CHTOPQ9Y3Y2 248 aaKnown RBP13.43□□□□□ -0.26
BUD23-217ENST00000487006 CXCL5P42830 114 aa13.42□□□□□ -0.26
BUD23-217ENST00000487006 TRAV12-1A0A0B4J245 112 aa13.4□□□□□ -0.26
BUD23-217ENST00000487006 IGLV5-39A0A0G2JS06 123 aa13.4□□□□□ -0.26
BUD23-217ENST00000487006 C9orf129Q5T035 196 aaKnown RBP13.4□□□□□ -0.26
BUD23-217ENST00000487006 TMEM170BQ5T4T1 132 aa13.4□□□□□ -0.26
BUD23-217ENST00000487006 PRR3P79522 188 aaKnown RBP13.39□□□□□ -0.27
BUD23-217ENST00000487006 PHF5AQ7RTV0 110 aaKnown RBP13.39□□□□□ -0.27
BUD23-217ENST00000487006 FAM19A5Q7Z5A7 132 aaPredicted RBP13.39□□□□□ -0.27
BUD23-217ENST00000487006 LRP1Q07954 4544 aaKnown RBP13.39□□□□□ -0.27
BUD23-217ENST00000487006 KRTAP7-1Q8IUC3 87 aa13.38□□□□□ -0.27
BUD23-217ENST00000487006 H0Y8G0 127 aa13.37□□□□□ -0.27
BUD23-217ENST00000487006 HIST1H2BKO60814 126 aa13.37□□□□□ -0.27
BUD23-217ENST00000487006 LEPROTL1O95214 131 aa13.37□□□□□ -0.27
BUD23-217ENST00000487006 HIST1H2BJP06899 126 aa13.37□□□□□ -0.27
BUD23-217ENST00000487006 HIST1H2BOP23527 126 aa13.37□□□□□ -0.27
BUD23-217ENST00000487006 HIST1H2BBP33778 126 aa13.37□□□□□ -0.27
BUD23-217ENST00000487006 HIST1H2BDP58876 126 aa13.37□□□□□ -0.27
BUD23-217ENST00000487006 HIST1H2BCP62807 126 aa13.37□□□□□ -0.27
BUD23-217ENST00000487006 HIST2H2BEQ16778 126 aa13.37□□□□□ -0.27
BUD23-217ENST00000487006 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.37□□□□□ -0.27
BUD23-217ENST00000487006 HIST1H2BHQ93079 126 aa13.37□□□□□ -0.27
BUD23-217ENST00000487006 HIST1H2BNQ99877 126 aa13.37□□□□□ -0.27
BUD23-217ENST00000487006 HIST1H2BMQ99879 126 aa13.37□□□□□ -0.27
BUD23-217ENST00000487006 FAT3Q8TDW7 4589 aa13.36□□□□□ -0.27
BUD23-217ENST00000487006 XAGE1AQ9HD64 81 aa13.36□□□□□ -0.27
BUD23-217ENST00000487006 FABP4P15090 132 aa13.35□□□□□ -0.27
BUD23-217ENST00000487006 ODF1Q14990 250 aa13.33□□□□□ -0.28
BUD23-217ENST00000487006 TMEM223A0PJW6 202 aa13.32□□□□□ -0.28
BUD23-217ENST00000487006 M0QXV9 152 aa13.31□□□□□ -0.28
BUD23-217ENST00000487006 SERTAD4-AS1Q5TG53 156 aa13.31□□□□□ -0.28
BUD23-217ENST00000487006 KRTAP11-1Q8IUC1 163 aa13.31□□□□□ -0.28
BUD23-217ENST00000487006 HSPB8Q9UJY1 196 aa13.31□□□□□ -0.28
BUD23-217ENST00000487006 PSORS1C2Q9UIG4 136 aa13.3□□□□□ -0.28
BUD23-217ENST00000487006 KRTAP29-1A8MX34 341 aaPredicted RBP13.29□□□□□ -0.28
BUD23-217ENST00000487006 HERC1Q15751 4861 aa13.29□□□□□ -0.28
BUD23-217ENST00000487006 ZNF625Q96I27 306 aaPredicted RBP13.28□□□□□ -0.28
BUD23-217ENST00000487006 J3QL48 77 aa13.27□□□□□ -0.29
BUD23-217ENST00000487006 PFN2P35080 140 aa13.27□□□□□ -0.29
BUD23-217ENST00000487006 PMCHL2Q9BQD1 86 aa13.27□□□□□ -0.29
BUD23-217ENST00000487006 ATP6V1G1O75348 118 aa13.26□□□□□ -0.29
BUD23-217ENST00000487006 ERG28Q9UKR5 140 aa13.25□□□□□ -0.29
BUD23-217ENST00000487006 C1orf137Q5JT78 98 aa13.24□□□□□ -0.29
BUD23-217ENST00000487006 UBE2BP63146 152 aa13.23□□□□□ -0.29
BUD23-217ENST00000487006 C22orf24Q9Y442 160 aa13.23□□□□□ -0.29
BUD23-217ENST00000487006 OXTP01178 125 aa13.22□□□□□ -0.29
BUD23-217ENST00000487006 S100A1P23297 94 aa13.22□□□□□ -0.29
BUD23-217ENST00000487006 MAP1LC3CQ9BXW4 147 aa13.22□□□□□ -0.29
BUD23-217ENST00000487006 DPM2O94777 84 aa13.21□□□□□ -0.29
BUD23-217ENST00000487006 PLNP26678 52 aa13.21□□□□□ -0.29
BUD23-217ENST00000487006 SRSF9Q13242 221 aaKnown RBP eCLIP13.2□□□□□ -0.3
BUD23-217ENST00000487006 SFTA2Q6UW10 78 aa13.19□□□□□ -0.3
BUD23-217ENST00000487006 IGKCP01834 107 aa13.18□□□□□ -0.3
BUD23-217ENST00000487006 TSPEAR-AS2P59090 65 aa13.18□□□□□ -0.3
BUD23-217ENST00000487006 COA6Q5JTJ3 125 aaKnown RBP13.18□□□□□ -0.3
BUD23-217ENST00000487006 SPINK6Q6UWN8 80 aa13.18□□□□□ -0.3
BUD23-217ENST00000487006 SND1-IT1Q9HBX3 110 aa13.18□□□□□ -0.3
BUD23-217ENST00000487006 A0A0U1RRA0 63 aa13.17□□□□□ -0.3
BUD23-217ENST00000487006 COX17Q14061 63 aa13.17□□□□□ -0.3
BUD23-217ENST00000487006 MRPL55Q7Z7F7 128 aaKnown RBP13.17□□□□□ -0.3
BUD23-217ENST00000487006 PLA2G2DQ9UNK4 145 aa13.17□□□□□ -0.3
BUD23-217ENST00000487006 SYS1-DBNDD2H3BUS1 97 aa13.16□□□□□ -0.3
BUD23-217ENST00000487006 IGLV7-43P04211 117 aa13.16□□□□□ -0.3
BUD23-217ENST00000487006 TP73-AS1Q9UF72 201 aa13.16□□□□□ -0.3
BUD23-217ENST00000487006 LBHQ53QV2 105 aaPredicted RBP13.15□□□□□ -0.3
BUD23-217ENST00000487006 NDUFA12Q9UI09 145 aa13.15□□□□□ -0.3
BUD23-217ENST00000487006 GAGE10A6NGK3 116 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms