RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 MT-ND6P03923 174 aa2.37□□□□□ -2.03
SNRNP40-205ENST00000486941 SMIM6P0DI80 62 aa2.37□□□□□ -2.03
SNRNP40-205ENST00000486941 TAGLN2P37802 199 aaKnown RBP2.37□□□□□ -2.03
SNRNP40-205ENST00000486941 POLR2KP53803 58 aaKnown RBP2.37□□□□□ -2.03
SNRNP40-205ENST00000486941 FOXA3P55318 350 aaPredicted RBP2.37□□□□□ -2.03
SNRNP40-205ENST00000486941 NDUFV3P56181 108 aaKnown RBP2.37□□□□□ -2.03
SNRNP40-205ENST00000486941 C9orf116Q5BN46 136 aaPredicted RBP2.37□□□□□ -2.03
SNRNP40-205ENST00000486941 C10orf91Q5T1B1 145 aa2.37□□□□□ -2.03
SNRNP40-205ENST00000486941 NUP35Q8NFH5 326 aa2.37□□□□□ -2.03
SNRNP40-205ENST00000486941 OCC1Q8TAD7 63 aa2.37□□□□□ -2.03
SNRNP40-205ENST00000486941 DIRC1Q969H9 104 aa2.37□□□□□ -2.03
SNRNP40-205ENST00000486941 MRAP2Q96G30 205 aa2.37□□□□□ -2.03
SNRNP40-205ENST00000486941 RNASE7Q9H1E1 156 aaKnown RBP2.37□□□□□ -2.03
SNRNP40-205ENST00000486941 ST20Q9HBF5 79 aa2.37□□□□□ -2.03
SNRNP40-205ENST00000486941 CHTOPQ9Y3Y2 248 aaKnown RBP2.37□□□□□ -2.03
SNRNP40-205ENST00000486941 CSDC2Q9Y534 153 aaKnown RBP2.37□□□□□ -2.03
SNRNP40-205ENST00000486941 LPAP08519 4548 aa2.36□□□□□ -2.03
SNRNP40-205ENST00000486941 IGLV1-50A0A075B6I6 118 aa2.36□□□□□ -2.03
SNRNP40-205ENST00000486941 FAM168BA1KXE4 195 aa2.36□□□□□ -2.03
SNRNP40-205ENST00000486941 C7orf77A4D0Y5 90 aa2.36□□□□□ -2.03
SNRNP40-205ENST00000486941 C5orf52A6NGY3 159 aa2.36□□□□□ -2.03
SNRNP40-205ENST00000486941 A8MWL6 223 aa2.36□□□□□ -2.03
SNRNP40-205ENST00000486941 F8WDY8 70 aa2.36□□□□□ -2.03
SNRNP40-205ENST00000486941 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.36□□□□□ -2.03
SNRNP40-205ENST00000486941 K7EN84 100 aa2.36□□□□□ -2.03
SNRNP40-205ENST00000486941 COX7A2LO14548 114 aa2.36□□□□□ -2.03
SNRNP40-205ENST00000486941 IGLV7-43P04211 117 aa2.36□□□□□ -2.03
SNRNP40-205ENST00000486941 BCL2P10415 239 aa2.36□□□□□ -2.03
SNRNP40-205ENST00000486941 S100PP25815 95 aa2.36□□□□□ -2.03
SNRNP40-205ENST00000486941 RAB14P61106 215 aa2.36□□□□□ -2.03
SNRNP40-205ENST00000486941 SMAGPQ0VAQ4 97 aa2.36□□□□□ -2.03
SNRNP40-205ENST00000486941 C1orf137Q5JT78 98 aa2.36□□□□□ -2.03
SNRNP40-205ENST00000486941 FAM231DQ6ZW35 169 aa2.36□□□□□ -2.03
SNRNP40-205ENST00000486941 TSKUQ8WUA8 353 aa2.36□□□□□ -2.03
SNRNP40-205ENST00000486941 CAMK2N2Q96S95 79 aa2.36□□□□□ -2.03
SNRNP40-205ENST00000486941 C2orf88Q9BSF0 95 aa2.36□□□□□ -2.03
SNRNP40-205ENST00000486941 TMEM242Q9NWH2 141 aa2.36□□□□□ -2.03
SNRNP40-205ENST00000486941 PCP4L1A6NKN8 68 aa2.35□□□□□ -2.03
SNRNP40-205ENST00000486941 H0Y9J4 135 aa2.35□□□□□ -2.03
SNRNP40-205ENST00000486941 PPP1R17O96001 155 aa2.35□□□□□ -2.03
SNRNP40-205ENST00000486941 TLX1NBP0CAT3 122 aa2.35□□□□□ -2.03
SNRNP40-205ENST00000486941 RAB4AP20338 218 aa2.35□□□□□ -2.03
SNRNP40-205ENST00000486941 RPL18AQ02543 176 aaKnown RBP2.35□□□□□ -2.03
SNRNP40-205ENST00000486941 TMEM241Q24JQ0 296 aa2.35□□□□□ -2.03
SNRNP40-205ENST00000486941 PHF5AQ7RTV0 110 aaKnown RBP2.35□□□□□ -2.03
SNRNP40-205ENST00000486941 COMMD7Q86VX2 200 aa2.35□□□□□ -2.03
SNRNP40-205ENST00000486941 OR10D4PQ8NGN7 298 aa2.35□□□□□ -2.03
SNRNP40-205ENST00000486941 BORCS7Q96B45 105 aa2.35□□□□□ -2.03
SNRNP40-205ENST00000486941 IMMP2LQ96T52 175 aa2.35□□□□□ -2.03
SNRNP40-205ENST00000486941 TIMM21Q9BVV7 248 aa2.35□□□□□ -2.03
SNRNP40-205ENST00000486941 TMEM191AQ9H0A3 160 aa2.35□□□□□ -2.03
SNRNP40-205ENST00000486941 MRPL35Q9NZE8 188 aaKnown RBP2.35□□□□□ -2.03
SNRNP40-205ENST00000486941 UBE2D4Q9Y2X8 147 aa2.35□□□□□ -2.03
SNRNP40-205ENST00000486941 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
SNRNP40-205ENST00000486941 A0A087WZ39 114 aa2.34□□□□□ -2.03
SNRNP40-205ENST00000486941 TRAV13-1A0A0B4J241 112 aa2.34□□□□□ -2.03
SNRNP40-205ENST00000486941 A0A0U1RQV1 116 aa2.34□□□□□ -2.03
SNRNP40-205ENST00000486941 A0A1B0GUT8 65 aa2.34□□□□□ -2.03
SNRNP40-205ENST00000486941 RPL37AP8A6NKH3 93 aa2.34□□□□□ -2.03
SNRNP40-205ENST00000486941 TMEM250H0YL14 139 aa2.34□□□□□ -2.03
SNRNP40-205ENST00000486941 NDUFA1O15239 70 aa2.34□□□□□ -2.03
SNRNP40-205ENST00000486941 S100A8P05109 93 aa2.34□□□□□ -2.03
SNRNP40-205ENST00000486941 FCER1GP30273 86 aa2.34□□□□□ -2.03
SNRNP40-205ENST00000486941 RPL13AP40429 203 aaKnown RBP2.34□□□□□ -2.03
SNRNP40-205ENST00000486941 SPAG11BQ08648 103 aa2.34□□□□□ -2.03
SNRNP40-205ENST00000486941 FAM74A3Q4VXF1 159 aa2.34□□□□□ -2.03
SNRNP40-205ENST00000486941 LBHQ53QV2 105 aaPredicted RBP2.34□□□□□ -2.03
SNRNP40-205ENST00000486941 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.03
SNRNP40-205ENST00000486941 C5orf38Q86SI9 138 aa2.34□□□□□ -2.03
SNRNP40-205ENST00000486941 C14orf144Q96I85 54 aa2.34□□□□□ -2.03
SNRNP40-205ENST00000486941 KIR2DL4Q99706 377 aa2.34□□□□□ -2.03
SNRNP40-205ENST00000486941 CARHSP1Q9Y2V2 147 aaKnown RBP2.34□□□□□ -2.03
SNRNP40-205ENST00000486941 TRBV24-1A0A075B6N3 115 aa2.33□□□□□ -2.04
SNRNP40-205ENST00000486941 IGHV3OR16-9A0A0B4J2B5 98 aa2.33□□□□□ -2.04
SNRNP40-205ENST00000486941 HIGD1CA8MV81 97 aa2.33□□□□□ -2.04
SNRNP40-205ENST00000486941 PPP1R2P9O14990 202 aa2.33□□□□□ -2.04
SNRNP40-205ENST00000486941 TCAPO15273 167 aa2.33□□□□□ -2.04
SNRNP40-205ENST00000486941 RPL32P62910 135 aaKnown RBP2.33□□□□□ -2.04
SNRNP40-205ENST00000486941 PRR4Q16378 134 aa2.33□□□□□ -2.04
SNRNP40-205ENST00000486941 Q1RN00 199 aa2.33□□□□□ -2.04
SNRNP40-205ENST00000486941 RNASE13Q5GAN3 156 aaKnown RBP2.33□□□□□ -2.04
SNRNP40-205ENST00000486941 UNQ6190/PRO20217Q6UXQ8 127 aa2.33□□□□□ -2.04
SNRNP40-205ENST00000486941 AMN1Q8IY45 258 aa2.33□□□□□ -2.04
SNRNP40-205ENST00000486941 ORAOV1Q8WV07 137 aa2.33□□□□□ -2.04
SNRNP40-205ENST00000486941 OSTCQ9NRP0 149 aa2.33□□□□□ -2.04
SNRNP40-205ENST00000486941 MUC2Q02817 5179 aa2.33□□□□□ -2.04
SNRNP40-205ENST00000486941 TRBV30A0A0K0K1B3 111 aa2.32□□□□□ -2.04
SNRNP40-205ENST00000486941 COLCA2A8K830 154 aa2.32□□□□□ -2.04
SNRNP40-205ENST00000486941 SMKR1H3BMG3 65 aa2.32□□□□□ -2.04
SNRNP40-205ENST00000486941 UBE2D1P51668 147 aa2.32□□□□□ -2.04
SNRNP40-205ENST00000486941 UBE2BP63146 152 aa2.32□□□□□ -2.04
SNRNP40-205ENST00000486941 MRPS36P82909 103 aaKnown RBP2.32□□□□□ -2.04
SNRNP40-205ENST00000486941 Q6ZUT4 128 aa2.32□□□□□ -2.04
SNRNP40-205ENST00000486941 FAM19A5Q7Z5A7 132 aaPredicted RBP2.32□□□□□ -2.04
SNRNP40-205ENST00000486941 LINC01551Q86U37 167 aa2.32□□□□□ -2.04
SNRNP40-205ENST00000486941 FAM104AQ969W3 186 aa2.32□□□□□ -2.04
SNRNP40-205ENST00000486941 YPEL4Q96NS1 127 aa2.32□□□□□ -2.04
SNRNP40-205ENST00000486941 C20orf78Q9BR46 151 aa2.32□□□□□ -2.04
SNRNP40-205ENST00000486941 SMDT1Q9H4I9 107 aa2.32□□□□□ -2.04
SNRNP40-205ENST00000486941 SPANXA1Q9NS26 97 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms