RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 SMIM1B2RUZ4 78 aa10.07□□□□□ -0.8
SEMA4D-219ENST00000486935 USP17L23D6RBM5 183 aa10.07□□□□□ -0.8
SEMA4D-219ENST00000486935 APOMO95445 188 aa10.07□□□□□ -0.8
SEMA4D-219ENST00000486935 HERVK_113P61574 105 aa10.07□□□□□ -0.8
SEMA4D-219ENST00000486935 PYY3Q5JQD4 70 aa10.07□□□□□ -0.8
SEMA4D-219ENST00000486935 ORAOV1Q8WV07 137 aa10.07□□□□□ -0.8
SEMA4D-219ENST00000486935 IGHV1-58A0A0C4DH39 117 aa10.06□□□□□ -0.8
SEMA4D-219ENST00000486935 HIGD2BQ4VC39 106 aa10.06□□□□□ -0.8
SEMA4D-219ENST00000486935 LINC01561Q8N1V8 128 aa10.06□□□□□ -0.8
SEMA4D-219ENST00000486935 STPG4Q8N801 248 aa10.06□□□□□ -0.8
SEMA4D-219ENST00000486935 C15orf56Q8N910 161 aa10.06□□□□□ -0.8
SEMA4D-219ENST00000486935 SRRM2Q9UQ35 2752 aaKnown RBP10.06□□□□□ -0.8
SEMA4D-219ENST00000486935 HERC1Q15751 4861 aa10.05□□□□□ -0.8
SEMA4D-219ENST00000486935 MAJINQ3KP22 176 aa10.05□□□□□ -0.8
SEMA4D-219ENST00000486935 CFAP161Q6P656 301 aa10.05□□□□□ -0.8
SEMA4D-219ENST00000486935 Q6ZSA8 131 aa10.05□□□□□ -0.8
SEMA4D-219ENST00000486935 TOMM7Q9P0U1 55 aa10.05□□□□□ -0.8
SEMA4D-219ENST00000486935 HSBP1L1C9JCN9 74 aa10.04□□□□□ -0.8
SEMA4D-219ENST00000486935 SPAG11BQ08648 103 aa10.04□□□□□ -0.8
SEMA4D-219ENST00000486935 LINC00526Q96FQ7 95 aa10.03□□□□□ -0.8
SEMA4D-219ENST00000486935 PRSS2P07478 247 aa10.02□□□□□ -0.81
SEMA4D-219ENST00000486935 ANKRD39Q53RE8 183 aa10.02□□□□□ -0.81
SEMA4D-219ENST00000486935 COX7B2Q8TF08 81 aa10.02□□□□□ -0.81
SEMA4D-219ENST00000486935 GVQW2A0A096LPI5 108 aaPredicted RBP10.01□□□□□ -0.81
SEMA4D-219ENST00000486935 IGLV5-39A0A0G2JS06 123 aa10.01□□□□□ -0.81
SEMA4D-219ENST00000486935 E9PLD3 99 aa10.01□□□□□ -0.81
SEMA4D-219ENST00000486935 ZNF561-AS1K7EIQ3 104 aa10.01□□□□□ -0.81
SEMA4D-219ENST00000486935 LEPROTO15243 131 aa10.01□□□□□ -0.81
SEMA4D-219ENST00000486935 C14orf177Q52M58 125 aa10.01□□□□□ -0.81
SEMA4D-219ENST00000486935 LINC00528Q8N1L1 170 aa10.01□□□□□ -0.81
SEMA4D-219ENST00000486935 VAMP8Q9BV40 100 aa10.01□□□□□ -0.81
SEMA4D-219ENST00000486935 PLA2G1BP04054 148 aaKnown RBP10□□□□□ -0.81
SEMA4D-219ENST00000486935 Q8IZM0 81 aa10□□□□□ -0.81
SEMA4D-219ENST00000486935 PLEKHB2Q96CS7 222 aa10□□□□□ -0.81
SEMA4D-219ENST00000486935 PAM16Q9Y3D7 125 aa10□□□□□ -0.81
SEMA4D-219ENST00000486935 IGKV2D-26A0A0A0MRZ7 120 aa9.99□□□□□ -0.81
SEMA4D-219ENST00000486935 SMIM6P0DI80 62 aa9.99□□□□□ -0.81
SEMA4D-219ENST00000486935 LGALS3P17931 250 aaKnown RBP9.99□□□□□ -0.81
SEMA4D-219ENST00000486935 NMUP48645 174 aa9.99□□□□□ -0.81
SEMA4D-219ENST00000486935 TSPEAR-AS2P59090 65 aa9.99□□□□□ -0.81
SEMA4D-219ENST00000486935 C6orf226Q5I0X4 101 aa9.99□□□□□ -0.81
SEMA4D-219ENST00000486935 SCXQ7RTU7 201 aa9.99□□□□□ -0.81
SEMA4D-219ENST00000486935 MYCBP2O75592 4640 aa9.98□□□□□ -0.81
SEMA4D-219ENST00000486935 J3QQQ9 107 aa9.98□□□□□ -0.81
SEMA4D-219ENST00000486935 KIAA0087Q14695 138 aa9.98□□□□□ -0.81
SEMA4D-219ENST00000486935 CKS1BP61024 79 aa9.97□□□□□ -0.81
SEMA4D-219ENST00000486935 SPATA45Q537H7 98 aa9.97□□□□□ -0.81
SEMA4D-219ENST00000486935 C2orf82Q6UX34 121 aa9.97□□□□□ -0.81
SEMA4D-219ENST00000486935 CAMK2N2Q96S95 79 aa9.96□□□□□ -0.82
SEMA4D-219ENST00000486935 NDUFA1O15239 70 aa9.95□□□□□ -0.82
SEMA4D-219ENST00000486935 S100A12P80511 92 aa9.95□□□□□ -0.82
SEMA4D-219ENST00000486935 CIRBP-AS1Q8TBR5 109 aa9.95□□□□□ -0.82
SEMA4D-219ENST00000486935 C2orf48Q96LS8 159 aa9.95□□□□□ -0.82
SEMA4D-219ENST00000486935 TTTY13Q9BZ97 58 aa9.95□□□□□ -0.82
SEMA4D-219ENST00000486935 NDUFA12Q9UI09 145 aa9.95□□□□□ -0.82
SEMA4D-219ENST00000486935 CXCL5P42830 114 aa9.94□□□□□ -0.82
SEMA4D-219ENST00000486935 J3QL48 77 aa9.93□□□□□ -0.82
SEMA4D-219ENST00000486935 SYCNQ0VAF6 134 aa9.93□□□□□ -0.82
SEMA4D-219ENST00000486935 C10orf25Q5T742 122 aa9.93□□□□□ -0.82
SEMA4D-219ENST00000486935 UNQ6190/PRO20217Q6UXQ8 127 aa9.93□□□□□ -0.82
SEMA4D-219ENST00000486935 Q6ZRU5 148 aa9.93□□□□□ -0.82
SEMA4D-219ENST00000486935 PCP2Q8IVA1 136 aa9.93□□□□□ -0.82
SEMA4D-219ENST00000486935 CARD19Q96LW7 228 aa9.93□□□□□ -0.82
SEMA4D-219ENST00000486935 MYMXA0A1B0GTQ4 84 aa9.92□□□□□ -0.82
SEMA4D-219ENST00000486935 ZNF815PA8K554 130 aa9.92□□□□□ -0.82
SEMA4D-219ENST00000486935 SLPIP03973 132 aa9.92□□□□□ -0.82
SEMA4D-219ENST00000486935 ZNF625Q96I27 306 aaPredicted RBP9.92□□□□□ -0.82
SEMA4D-219ENST00000486935 F8WDY8 70 aa9.91□□□□□ -0.82
SEMA4D-219ENST00000486935 C12orf57Q99622 126 aa9.91□□□□□ -0.82
SEMA4D-219ENST00000486935 C6orf48Q9UBA6 75 aa9.91□□□□□ -0.82
SEMA4D-219ENST00000486935 CNBPP62633 177 aaKnown RBP9.9□□□□□ -0.82
SEMA4D-219ENST00000486935 SFTA2Q6UW10 78 aa9.9□□□□□ -0.82
SEMA4D-219ENST00000486935 C9orf163Q8N9P6 203 aa9.9□□□□□ -0.82
SEMA4D-219ENST00000486935 C14orf144Q96I85 54 aa9.9□□□□□ -0.82
SEMA4D-219ENST00000486935 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.89□□□□□ -0.83
SEMA4D-219ENST00000486935 C9orf116Q5BN46 136 aaPredicted RBP9.89□□□□□ -0.83
SEMA4D-219ENST00000486935 TP73-AS1Q9UF72 201 aa9.89□□□□□ -0.83
SEMA4D-219ENST00000486935 FLG2Q5D862 2391 aaPredicted RBP9.88□□□□□ -0.83
SEMA4D-219ENST00000486935 TRBV30A0A0K0K1B3 111 aa9.88□□□□□ -0.83
SEMA4D-219ENST00000486935 COX8AP10176 69 aa9.88□□□□□ -0.83
SEMA4D-219ENST00000486935 HERV-K104P63124 156 aa9.88□□□□□ -0.83
SEMA4D-219ENST00000486935 MEIG1Q5JSS6 88 aa9.88□□□□□ -0.83
SEMA4D-219ENST00000486935 DMBT1Q9UGM3 2413 aaPredicted RBP9.87□□□□□ -0.83
SEMA4D-219ENST00000486935 KRTAP10-4P60372 401 aaPredicted RBP9.87□□□□□ -0.83
SEMA4D-219ENST00000486935 LINC00518Q8N0U6 118 aa9.87□□□□□ -0.83
SEMA4D-219ENST00000486935 ERG28Q9UKR5 140 aa9.87□□□□□ -0.83
SEMA4D-219ENST00000486935 A0A0J9YXY3 114 aa9.86□□□□□ -0.83
SEMA4D-219ENST00000486935 A0A0U1RRA0 63 aa9.86□□□□□ -0.83
SEMA4D-219ENST00000486935 KRTAP29-1A8MX34 341 aaPredicted RBP9.86□□□□□ -0.83
SEMA4D-219ENST00000486935 PFN2P35080 140 aa9.86□□□□□ -0.83
SEMA4D-219ENST00000486935 SCGB1D4Q6XE38 83 aa9.86□□□□□ -0.83
SEMA4D-219ENST00000486935 SDIM1Q6ZPB5 146 aa9.86□□□□□ -0.83
SEMA4D-219ENST00000486935 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.86□□□□□ -0.83
SEMA4D-219ENST00000486935 RNF151Q2KHN1 245 aa9.85□□□□□ -0.83
SEMA4D-219ENST00000486935 BOD1L2Q8IYS8 172 aa9.85□□□□□ -0.83
SEMA4D-219ENST00000486935 PRO1933Q9H354 126 aa9.85□□□□□ -0.83
SEMA4D-219ENST00000486935 PANO1I0J062 215 aa9.84□□□□□ -0.83
SEMA4D-219ENST00000486935 SMIM13P0DJ93 91 aa9.84□□□□□ -0.83
SEMA4D-219ENST00000486935 LINC00158P58513 81 aa9.84□□□□□ -0.83
SEMA4D-219ENST00000486935 SLC25A34Q6PIV7 304 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms