RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 A0A096LNI7 61 aa7.59□□□□□ -1.19
HLA-DOA-204ENST00000485901 RPL37AP61513 92 aaKnown RBP7.59□□□□□ -1.19
HLA-DOA-204ENST00000485901 C6orf226Q5I0X4 101 aa7.59□□□□□ -1.19
HLA-DOA-204ENST00000485901 UNQ6190/PRO20217Q6UXQ8 127 aa7.59□□□□□ -1.19
HLA-DOA-204ENST00000485901 LINC00469Q8N7U9 141 aa7.59□□□□□ -1.19
HLA-DOA-204ENST00000485901 PLAC8Q9NZF1 115 aa7.59□□□□□ -1.19
HLA-DOA-204ENST00000485901 PTTG1IPP53801 180 aa7.58□□□□□ -1.2
HLA-DOA-204ENST00000485901 GAGE2BQ13066 116 aa7.58□□□□□ -1.2
HLA-DOA-204ENST00000485901 STPG4Q8N801 248 aa7.58□□□□□ -1.2
HLA-DOA-204ENST00000485901 TOMM7Q9P0U1 55 aa7.58□□□□□ -1.2
HLA-DOA-204ENST00000485901 IGLV5-45A0A087WSX0 123 aa7.57□□□□□ -1.2
HLA-DOA-204ENST00000485901 HSBP1O75506 76 aa7.57□□□□□ -1.2
HLA-DOA-204ENST00000485901 CKS1BP61024 79 aa7.57□□□□□ -1.2
HLA-DOA-204ENST00000485901 C10orf25Q5T742 122 aa7.57□□□□□ -1.2
HLA-DOA-204ENST00000485901 Q8IZM0 81 aa7.57□□□□□ -1.2
HLA-DOA-204ENST00000485901 TRBV30A0A0K0K1B3 111 aa7.56□□□□□ -1.2
HLA-DOA-204ENST00000485901 H3BRM9 83 aa7.56□□□□□ -1.2
HLA-DOA-204ENST00000485901 C2orf82Q6UX34 121 aa7.56□□□□□ -1.2
HLA-DOA-204ENST00000485901 C6orf48Q9UBA6 75 aa7.56□□□□□ -1.2
HLA-DOA-204ENST00000485901 TLX1NBP0CAT3 122 aa7.55□□□□□ -1.2
HLA-DOA-204ENST00000485901 IGLC3P0DOY3 106 aa7.55□□□□□ -1.2
HLA-DOA-204ENST00000485901 RPL18AQ02543 176 aaKnown RBP7.55□□□□□ -1.2
HLA-DOA-204ENST00000485901 C7orf33Q8WU49 177 aa7.55□□□□□ -1.2
HLA-DOA-204ENST00000485901 IFI27L1Q96BM0 104 aa7.55□□□□□ -1.2
HLA-DOA-204ENST00000485901 SMIM1B2RUZ4 78 aa7.54□□□□□ -1.2
HLA-DOA-204ENST00000485901 SCO1O75880 301 aa7.54□□□□□ -1.2
HLA-DOA-204ENST00000485901 CXCL5P42830 114 aa7.54□□□□□ -1.2
HLA-DOA-204ENST00000485901 FAM19A2Q8N3H0 131 aa7.54□□□□□ -1.2
HLA-DOA-204ENST00000485901 Q6ZRP5 223 aa7.53□□□□□ -1.2
HLA-DOA-204ENST00000485901 COX7B2Q8TF08 81 aa7.53□□□□□ -1.2
HLA-DOA-204ENST00000485901 TRAV12-1A0A0B4J245 112 aa7.52□□□□□ -1.21
HLA-DOA-204ENST00000485901 F8VRH5 84 aa7.52□□□□□ -1.21
HLA-DOA-204ENST00000485901 SERF1AO75920 110 aa7.52□□□□□ -1.21
HLA-DOA-204ENST00000485901 SPINK8P0C7L1 97 aa7.52□□□□□ -1.21
HLA-DOA-204ENST00000485901 C9orf116Q5BN46 136 aaPredicted RBP7.52□□□□□ -1.21
HLA-DOA-204ENST00000485901 CHTOPQ9Y3Y2 248 aaKnown RBP7.52□□□□□ -1.21
HLA-DOA-204ENST00000485901 A0A1W2PNN7 141 aa7.51□□□□□ -1.21
HLA-DOA-204ENST00000485901 NDUFC2-KCTD14E9PQ53 114 aa7.51□□□□□ -1.21
HLA-DOA-204ENST00000485901 LEPROTL1O95214 131 aa7.51□□□□□ -1.21
HLA-DOA-204ENST00000485901 MT1HL1P0DM35 61 aa7.51□□□□□ -1.21
HLA-DOA-204ENST00000485901 ZNF22P17026 224 aaPredicted RBP7.51□□□□□ -1.21
HLA-DOA-204ENST00000485901 GAGE2EQ4V326 116 aa7.51□□□□□ -1.21
HLA-DOA-204ENST00000485901 GAGE2DQ9UEU5 116 aa7.51□□□□□ -1.21
HLA-DOA-204ENST00000485901 C11orf86A6NJI1 115 aa7.5□□□□□ -1.21
HLA-DOA-204ENST00000485901 TMEM170BQ5T4T1 132 aa7.5□□□□□ -1.21
HLA-DOA-204ENST00000485901 TNXBP22105 4242 aa7.49□□□□□ -1.21
HLA-DOA-204ENST00000485901 NUPR1O60356 82 aa7.49□□□□□ -1.21
HLA-DOA-204ENST00000485901 HNRNPA3P51991 378 aaKnown RBP7.49□□□□□ -1.21
HLA-DOA-204ENST00000485901 LINC00310P59036 64 aa7.49□□□□□ -1.21
HLA-DOA-204ENST00000485901 HSPB8Q9UJY1 196 aa7.49□□□□□ -1.21
HLA-DOA-204ENST00000485901 LRP2P98164 4655 aa7.48□□□□□ -1.21
HLA-DOA-204ENST00000485901 IGLV5-39A0A0G2JS06 123 aa7.48□□□□□ -1.21
HLA-DOA-204ENST00000485901 S100A1P23297 94 aa7.48□□□□□ -1.21
HLA-DOA-204ENST00000485901 HIST1H2BKO60814 126 aa7.47□□□□□ -1.21
HLA-DOA-204ENST00000485901 HIST1H2BJP06899 126 aa7.47□□□□□ -1.21
HLA-DOA-204ENST00000485901 FABP4P15090 132 aa7.47□□□□□ -1.21
HLA-DOA-204ENST00000485901 HIST1H2BOP23527 126 aa7.47□□□□□ -1.21
HLA-DOA-204ENST00000485901 HIST1H2BBP33778 126 aa7.47□□□□□ -1.21
HLA-DOA-204ENST00000485901 HIST1H2BDP58876 126 aa7.47□□□□□ -1.21
HLA-DOA-204ENST00000485901 HIST1H2BCP62807 126 aa7.47□□□□□ -1.21
HLA-DOA-204ENST00000485901 HIST2H2BEQ16778 126 aa7.47□□□□□ -1.21
HLA-DOA-204ENST00000485901 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.47□□□□□ -1.21
HLA-DOA-204ENST00000485901 HIST1H2BHQ93079 126 aa7.47□□□□□ -1.21
HLA-DOA-204ENST00000485901 HIST1H2BNQ99877 126 aa7.47□□□□□ -1.21
HLA-DOA-204ENST00000485901 HIST1H2BMQ99879 126 aa7.47□□□□□ -1.21
HLA-DOA-204ENST00000485901 H0Y8G0 127 aa7.46□□□□□ -1.22
HLA-DOA-204ENST00000485901 TMEM223A0PJW6 202 aa7.45□□□□□ -1.22
HLA-DOA-204ENST00000485901 FAM168BA1KXE4 195 aa7.45□□□□□ -1.22
HLA-DOA-204ENST00000485901 C9orf129Q5T035 196 aaKnown RBP7.45□□□□□ -1.22
HLA-DOA-204ENST00000485901 SFTA2Q6UW10 78 aa7.45□□□□□ -1.22
HLA-DOA-204ENST00000485901 PRR3P79522 188 aaKnown RBP7.44□□□□□ -1.22
HLA-DOA-204ENST00000485901 ODF1Q14990 250 aa7.44□□□□□ -1.22
HLA-DOA-204ENST00000485901 PHF5AQ7RTV0 110 aaKnown RBP7.44□□□□□ -1.22
HLA-DOA-204ENST00000485901 FAM19A5Q7Z5A7 132 aaPredicted RBP7.44□□□□□ -1.22
HLA-DOA-204ENST00000485901 MAP1LC3CQ9BXW4 147 aa7.44□□□□□ -1.22
HLA-DOA-204ENST00000485901 XAGE1AQ9HD64 81 aa7.43□□□□□ -1.22
HLA-DOA-204ENST00000485901 PLNP26678 52 aa7.42□□□□□ -1.22
HLA-DOA-204ENST00000485901 COX17Q14061 63 aa7.42□□□□□ -1.22
HLA-DOA-204ENST00000485901 LINC01600Q96MT4 127 aa7.42□□□□□ -1.22
HLA-DOA-204ENST00000485901 M0QXV9 152 aa7.41□□□□□ -1.22
HLA-DOA-204ENST00000485901 ATP6V1G1O75348 118 aa7.41□□□□□ -1.22
HLA-DOA-204ENST00000485901 DPM2O94777 84 aa7.41□□□□□ -1.22
HLA-DOA-204ENST00000485901 PFN2P35080 140 aa7.41□□□□□ -1.22
HLA-DOA-204ENST00000485901 KRTAP7-1Q8IUC3 87 aa7.41□□□□□ -1.22
HLA-DOA-204ENST00000485901 ERG28Q9UKR5 140 aa7.41□□□□□ -1.22
HLA-DOA-204ENST00000485901 LBHQ53QV2 105 aaPredicted RBP7.4□□□□□ -1.22
HLA-DOA-204ENST00000485901 COA6Q5JTJ3 125 aaKnown RBP7.4□□□□□ -1.22
HLA-DOA-204ENST00000485901 ZNF625Q96I27 306 aaPredicted RBP7.4□□□□□ -1.22
HLA-DOA-204ENST00000485901 PSORS1C2Q9UIG4 136 aa7.4□□□□□ -1.22
HLA-DOA-204ENST00000485901 C22orf24Q9Y442 160 aa7.4□□□□□ -1.22
HLA-DOA-204ENST00000485901 IGKCP01834 107 aa7.39□□□□□ -1.23
HLA-DOA-204ENST00000485901 UBE2BP63146 152 aa7.39□□□□□ -1.23
HLA-DOA-204ENST00000485901 SPINK6Q6UWN8 80 aa7.39□□□□□ -1.23
HLA-DOA-204ENST00000485901 SYS1-DBNDD2H3BUS1 97 aa7.38□□□□□ -1.23
HLA-DOA-204ENST00000485901 HERVK_113P61574 105 aa7.38□□□□□ -1.23
HLA-DOA-204ENST00000485901 SRSF9Q13242 221 aaKnown RBP eCLIP7.38□□□□□ -1.23
HLA-DOA-204ENST00000485901 C1orf137Q5JT78 98 aa7.38□□□□□ -1.23
HLA-DOA-204ENST00000485901 PMCHL2Q9BQD1 86 aa7.38□□□□□ -1.23
HLA-DOA-204ENST00000485901 TP73-AS1Q9UF72 201 aa7.38□□□□□ -1.23
HLA-DOA-204ENST00000485901 LINC00587B1AMM8 73 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms