RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 TMUB2Q71RG4 321 aa3.59□□□□□ -1.83
SMC4-217ENST00000485867 LINC00469Q8N7U9 141 aa3.59□□□□□ -1.83
SMC4-217ENST00000485867 ST20Q9HBF5 79 aa3.59□□□□□ -1.83
SMC4-217ENST00000485867 XAGE1AQ9HD64 81 aa3.59□□□□□ -1.83
SMC4-217ENST00000485867 RPL37AP8A6NKH3 93 aa3.58□□□□□ -1.84
SMC4-217ENST00000485867 KRTAP4-16G5E9R7 235 aaPredicted RBP3.58□□□□□ -1.84
SMC4-217ENST00000485867 UPK1BO75841 260 aa3.58□□□□□ -1.84
SMC4-217ENST00000485867 SMAGPQ0VAQ4 97 aa3.58□□□□□ -1.84
SMC4-217ENST00000485867 PCOTHQ58A44 107 aa3.58□□□□□ -1.84
SMC4-217ENST00000485867 ENKURQ8TC29 256 aa3.58□□□□□ -1.84
SMC4-217ENST00000485867 LINC00167Q96N53 147 aa3.58□□□□□ -1.84
SMC4-217ENST00000485867 MARVELD1Q9BSK0 173 aa3.58□□□□□ -1.84
SMC4-217ENST00000485867 TIMM21Q9BVV7 248 aa3.58□□□□□ -1.84
SMC4-217ENST00000485867 IGLV5-45A0A087WSX0 123 aa3.57□□□□□ -1.84
SMC4-217ENST00000485867 BORCS7-ASMTA0A0B4J1R7 106 aa3.57□□□□□ -1.84
SMC4-217ENST00000485867 RAB19A4D1S5 217 aa3.57□□□□□ -1.84
SMC4-217ENST00000485867 ZNF727A8MUV8 499 aa3.57□□□□□ -1.84
SMC4-217ENST00000485867 RPL24P83731 157 aaKnown RBP3.57□□□□□ -1.84
SMC4-217ENST00000485867 SMIM15Q7Z3B0 74 aa3.57□□□□□ -1.84
SMC4-217ENST00000485867 FAM104AQ969W3 186 aa3.57□□□□□ -1.84
SMC4-217ENST00000485867 C11orf52Q96A22 123 aa3.57□□□□□ -1.84
SMC4-217ENST00000485867 A0A1B0GV50 99 aa3.56□□□□□ -1.84
SMC4-217ENST00000485867 GAGE10A6NGK3 116 aa3.56□□□□□ -1.84
SMC4-217ENST00000485867 FCER1GP30273 86 aa3.56□□□□□ -1.84
SMC4-217ENST00000485867 PRLHP81277 87 aa3.56□□□□□ -1.84
SMC4-217ENST00000485867 KIR2DL4Q99706 377 aa3.56□□□□□ -1.84
SMC4-217ENST00000485867 NDUFA12Q9UI09 145 aa3.56□□□□□ -1.84
SMC4-217ENST00000485867 TGIF2-C20orf24A0A0A6YYL0 155 aa3.55□□□□□ -1.84
SMC4-217ENST00000485867 PNRC1Q12796 327 aaPredicted RBP3.55□□□□□ -1.84
SMC4-217ENST00000485867 Q8NBF4 154 aa3.55□□□□□ -1.84
SMC4-217ENST00000485867 PLEKHB2Q96CS7 222 aa3.55□□□□□ -1.84
SMC4-217ENST00000485867 SMIM12Q96EX1 92 aa3.55□□□□□ -1.84
SMC4-217ENST00000485867 TRBV20OR9-2A0A075B6H5 130 aa3.54□□□□□ -1.84
SMC4-217ENST00000485867 VCYO14598 125 aa3.54□□□□□ -1.84
SMC4-217ENST00000485867 SPINK1P00995 79 aa3.54□□□□□ -1.84
SMC4-217ENST00000485867 GNG4P50150 75 aa3.54□□□□□ -1.84
SMC4-217ENST00000485867 DSCR10P59022 87 aa3.54□□□□□ -1.84
SMC4-217ENST00000485867 RPL32P62910 135 aaKnown RBP3.54□□□□□ -1.84
SMC4-217ENST00000485867 HBBP68871 147 aa3.54□□□□□ -1.84
SMC4-217ENST00000485867 CCL20P78556 96 aa3.54□□□□□ -1.84
SMC4-217ENST00000485867 COX6B2Q6YFQ2 88 aa3.54□□□□□ -1.84
SMC4-217ENST00000485867 KCNRGQ8N5I3 272 aa3.54□□□□□ -1.84
SMC4-217ENST00000485867 SFT2D1Q8WV19 159 aa3.54□□□□□ -1.84
SMC4-217ENST00000485867 MBD3L1Q8WWY6 194 aa3.54□□□□□ -1.84
SMC4-217ENST00000485867 RPL39P62891 51 aaKnown RBP3.53□□□□□ -1.84
SMC4-217ENST00000485867 MRPS36P82909 103 aaKnown RBP3.53□□□□□ -1.84
SMC4-217ENST00000485867 Q5BKY6 102 aa3.53□□□□□ -1.84
SMC4-217ENST00000485867 Q8N377 158 aa3.53□□□□□ -1.84
SMC4-217ENST00000485867 FAM19A2Q8N3H0 131 aa3.53□□□□□ -1.84
SMC4-217ENST00000485867 BIN3Q9NQY0 253 aa3.53□□□□□ -1.84
SMC4-217ENST00000485867 IGKV2-28A0A075B6P5 120 aa3.52□□□□□ -1.85
SMC4-217ENST00000485867 SMKR1H3BMG3 65 aa3.52□□□□□ -1.85
SMC4-217ENST00000485867 IGKV2D-28P01615 120 aa3.52□□□□□ -1.85
SMC4-217ENST00000485867 FAM19A1Q7Z5A9 133 aa3.52□□□□□ -1.85
SMC4-217ENST00000485867 FAM213BQ8TBF2 198 aa3.52□□□□□ -1.85
SMC4-217ENST00000485867 SPRR4Q96PI1 79 aa3.52□□□□□ -1.85
SMC4-217ENST00000485867 SPANXA1Q9NS26 97 aa3.52□□□□□ -1.85
SMC4-217ENST00000485867 SCO1O75880 301 aa3.51□□□□□ -1.85
SMC4-217ENST00000485867 RAB4AP20338 218 aa3.51□□□□□ -1.85
SMC4-217ENST00000485867 CKS1BP61024 79 aa3.51□□□□□ -1.85
SMC4-217ENST00000485867 RPS29P62273 56 aaKnown RBP3.51□□□□□ -1.85
SMC4-217ENST00000485867 AMN1Q8IY45 258 aa3.51□□□□□ -1.85
SMC4-217ENST00000485867 LINC01561Q8N1V8 128 aa3.51□□□□□ -1.85
SMC4-217ENST00000485867 KRTAP4-3Q9BYR4 195 aa3.51□□□□□ -1.85
SMC4-217ENST00000485867 TOMM7Q9P0U1 55 aa3.51□□□□□ -1.85
SMC4-217ENST00000485867 FXYD6-FXYD2A0A087WZ82 144 aa3.5□□□□□ -1.85
SMC4-217ENST00000485867 TMEM238C9JI98 176 aa3.5□□□□□ -1.85
SMC4-217ENST00000485867 IFITM3Q01628 133 aa3.5□□□□□ -1.85
SMC4-217ENST00000485867 KRTAP6-3Q3LI67 103 aa3.5□□□□□ -1.85
SMC4-217ENST00000485867 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
SMC4-217ENST00000485867 CBLN2Q8IUK8 224 aa3.5□□□□□ -1.85
SMC4-217ENST00000485867 Q8IZM0 81 aa3.5□□□□□ -1.85
SMC4-217ENST00000485867 NKAPP1Q8N9T2 125 aa3.5□□□□□ -1.85
SMC4-217ENST00000485867 GNB1LQ9BYB4 327 aa3.5□□□□□ -1.85
SMC4-217ENST00000485867 TMEM126AQ9H061 195 aa3.5□□□□□ -1.85
SMC4-217ENST00000485867 TMEM191AQ9H0A3 160 aa3.5□□□□□ -1.85
SMC4-217ENST00000485867 MANBALQ9NQG1 85 aa3.5□□□□□ -1.85
SMC4-217ENST00000485867 GNG13Q9P2W3 67 aa3.5□□□□□ -1.85
SMC4-217ENST00000485867 F8VRH5 84 aa3.49□□□□□ -1.85
SMC4-217ENST00000485867 K7EN84 100 aa3.49□□□□□ -1.85
SMC4-217ENST00000485867 PPP1R2P9O14990 202 aa3.49□□□□□ -1.85
SMC4-217ENST00000485867 SLC25A20O43772 301 aa3.49□□□□□ -1.85
SMC4-217ENST00000485867 C6orf226Q5I0X4 101 aa3.49□□□□□ -1.85
SMC4-217ENST00000485867 HIGD2AQ9BW72 106 aa3.49□□□□□ -1.85
SMC4-217ENST00000485867 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
SMC4-217ENST00000485867 UMAD1C9J7I0 102 aa3.48□□□□□ -1.85
SMC4-217ENST00000485867 M0R378 163 aa3.48□□□□□ -1.85
SMC4-217ENST00000485867 PPP1R17O96001 155 aa3.48□□□□□ -1.85
SMC4-217ENST00000485867 Q6ZN92 141 aa3.48□□□□□ -1.85
SMC4-217ENST00000485867 ALKBH7Q9BT30 221 aaPredicted RBP3.48□□□□□ -1.85
SMC4-217ENST00000485867 IGLV4-3A0A075B6K6 122 aa3.47□□□□□ -1.85
SMC4-217ENST00000485867 A0A1B0GUT8 65 aa3.47□□□□□ -1.85
SMC4-217ENST00000485867 A8MWL6 223 aa3.47□□□□□ -1.85
SMC4-217ENST00000485867 TCAPO15273 167 aa3.47□□□□□ -1.85
SMC4-217ENST00000485867 GATCO43716 136 aaKnown RBP3.47□□□□□ -1.85
SMC4-217ENST00000485867 PDE6DO43924 150 aa3.47□□□□□ -1.85
SMC4-217ENST00000485867 GIPP09681 153 aaPredicted RBP3.47□□□□□ -1.85
SMC4-217ENST00000485867 OCC1Q8TAD7 63 aa3.47□□□□□ -1.85
SMC4-217ENST00000485867 BORCS7Q96B45 105 aa3.47□□□□□ -1.85
SMC4-217ENST00000485867 MED9Q9NWA0 146 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 175.9 ms