RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 HERVK_113P61574 105 aa10.24□□□□□ -0.77
APOE-205ENST00000485628 RNF151Q2KHN1 245 aa10.24□□□□□ -0.77
APOE-205ENST00000485628 C2orf82Q6UX34 121 aa10.24□□□□□ -0.77
APOE-205ENST00000485628 UNQ6190/PRO20217Q6UXQ8 127 aa10.24□□□□□ -0.77
APOE-205ENST00000485628 C9orf163Q8N9P6 203 aa10.24□□□□□ -0.77
APOE-205ENST00000485628 PLEKHB2Q96CS7 222 aa10.24□□□□□ -0.77
APOE-205ENST00000485628 PKHD1P08F94 4074 aa10.23□□□□□ -0.77
APOE-205ENST00000485628 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.23□□□□□ -0.77
APOE-205ENST00000485628 J3QQQ9 107 aa10.23□□□□□ -0.77
APOE-205ENST00000485628 SYCNQ0VAF6 134 aa10.23□□□□□ -0.77
APOE-205ENST00000485628 CDPF1Q6NVV7 123 aa10.23□□□□□ -0.77
APOE-205ENST00000485628 TOMM7Q9P0U1 55 aa10.23□□□□□ -0.77
APOE-205ENST00000485628 NDUFA1O15239 70 aa10.22□□□□□ -0.77
APOE-205ENST00000485628 PRSS2P07478 247 aa10.22□□□□□ -0.77
APOE-205ENST00000485628 CAMK2N2Q96S95 79 aa10.22□□□□□ -0.77
APOE-205ENST00000485628 C6orf48Q9UBA6 75 aa10.22□□□□□ -0.77
APOE-205ENST00000485628 TRBV30A0A0K0K1B3 111 aa10.21□□□□□ -0.77
APOE-205ENST00000485628 FUSP35637 526 aaKnown RBP eCLIP10.2□□□□□ -0.78
APOE-205ENST00000485628 SFTA2Q6UW10 78 aa10.2□□□□□ -0.78
APOE-205ENST00000485628 CARD19Q96LW7 228 aa10.2□□□□□ -0.78
APOE-205ENST00000485628 TLX1NBP0CAT3 122 aa10.19□□□□□ -0.78
APOE-205ENST00000485628 NMUP48645 174 aa10.19□□□□□ -0.78
APOE-205ENST00000485628 CKS1BP61024 79 aa10.19□□□□□ -0.78
APOE-205ENST00000485628 SDIM1Q6ZPB5 146 aa10.19□□□□□ -0.78
APOE-205ENST00000485628 NDUFA12Q9UI09 145 aa10.19□□□□□ -0.78
APOE-205ENST00000485628 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.18□□□□□ -0.78
APOE-205ENST00000485628 IGLV5-52A0A0A0MRZ9 124 aa10.17□□□□□ -0.78
APOE-205ENST00000485628 TTTY13Q9BZ97 58 aa10.17□□□□□ -0.78
APOE-205ENST00000485628 DYNC1H1Q14204 4646 aaKnown RBP10.16□□□□□ -0.78
APOE-205ENST00000485628 MYMXA0A1B0GTQ4 84 aa10.16□□□□□ -0.78
APOE-205ENST00000485628 LGALS3P17931 250 aaKnown RBP10.16□□□□□ -0.78
APOE-205ENST00000485628 HERV-K104P63124 156 aa10.16□□□□□ -0.78
APOE-205ENST00000485628 C9orf116Q5BN46 136 aaPredicted RBP10.16□□□□□ -0.78
APOE-205ENST00000485628 HSBP1L1C9JCN9 74 aa10.15□□□□□ -0.78
APOE-205ENST00000485628 PCP2Q8IVA1 136 aa10.15□□□□□ -0.78
APOE-205ENST00000485628 SMIM6P0DI80 62 aa10.14□□□□□ -0.79
APOE-205ENST00000485628 COX17Q14061 63 aa10.14□□□□□ -0.79
APOE-205ENST00000485628 LINC01620Q4KN68 170 aa10.14□□□□□ -0.79
APOE-205ENST00000485628 LRP1BQ9NZR2 4599 aa10.14□□□□□ -0.79
APOE-205ENST00000485628 DNAH8Q96JB1 4490 aa10.13□□□□□ -0.79
APOE-205ENST00000485628 GCSHP23434 173 aa10.13□□□□□ -0.79
APOE-205ENST00000485628 CIRBPQ14011 172 aaKnown RBP10.13□□□□□ -0.79
APOE-205ENST00000485628 Q6ZSA8 131 aa10.13□□□□□ -0.79
APOE-205ENST00000485628 VAMP8Q9BV40 100 aa10.13□□□□□ -0.79
APOE-205ENST00000485628 A0A0J9YXY3 114 aa10.12□□□□□ -0.79
APOE-205ENST00000485628 LOC107984640A0A0U1RRK4 108 aa10.12□□□□□ -0.79
APOE-205ENST00000485628 NDUFC2-KCTD14E9PQ53 114 aa10.12□□□□□ -0.79
APOE-205ENST00000485628 COX8AP10176 69 aa10.12□□□□□ -0.79
APOE-205ENST00000485628 KRTAP10-1P60331 282 aa10.12□□□□□ -0.79
APOE-205ENST00000485628 SPATA45Q537H7 98 aa10.12□□□□□ -0.79
APOE-205ENST00000485628 Q6ZRP5 223 aa10.12□□□□□ -0.79
APOE-205ENST00000485628 BOD1L2Q8IYS8 172 aa10.12□□□□□ -0.79
APOE-205ENST00000485628 LITAFQ99732 161 aa10.12□□□□□ -0.79
APOE-205ENST00000485628 ERG28Q9UKR5 140 aa10.12□□□□□ -0.79
APOE-205ENST00000485628 PAM16Q9Y3D7 125 aa10.12□□□□□ -0.79
APOE-205ENST00000485628 ZNF815PA8K554 130 aa10.11□□□□□ -0.79
APOE-205ENST00000485628 DLEU1O43261 78 aa10.11□□□□□ -0.79
APOE-205ENST00000485628 C16orf90A8MZG2 172 aa10.1□□□□□ -0.79
APOE-205ENST00000485628 EPM2AB3EWF7 344 aa10.1□□□□□ -0.79
APOE-205ENST00000485628 TIMM17BO60830 172 aa10.1□□□□□ -0.79
APOE-205ENST00000485628 A0A096LNI7 61 aa10.09□□□□□ -0.79
APOE-205ENST00000485628 LINC00587B1AMM8 73 aa10.09□□□□□ -0.79
APOE-205ENST00000485628 PANO1I0J062 215 aa10.09□□□□□ -0.79
APOE-205ENST00000485628 PTTG1IPP53801 180 aa10.09□□□□□ -0.79
APOE-205ENST00000485628 EPPK1P58107 5090 aaKnown RBP10.08□□□□□ -0.8
APOE-205ENST00000485628 LOC107984156A0A0G2JMH3 177 aa10.08□□□□□ -0.8
APOE-205ENST00000485628 ADAMTSL4-AS1Q5T5F5 129 aa10.08□□□□□ -0.8
APOE-205ENST00000485628 ARL17AQ8IVW1 177 aa10.08□□□□□ -0.8
APOE-205ENST00000485628 FAM30AQ9NZY2 134 aa10.08□□□□□ -0.8
APOE-205ENST00000485628 PKIGQ9Y2B9 76 aa10.08□□□□□ -0.8
APOE-205ENST00000485628 SMIM13P0DJ93 91 aa10.07□□□□□ -0.8
APOE-205ENST00000485628 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.07□□□□□ -0.8
APOE-205ENST00000485628 PFN2P35080 140 aa10.06□□□□□ -0.8
APOE-205ENST00000485628 C9orf129Q5T035 196 aaKnown RBP10.06□□□□□ -0.8
APOE-205ENST00000485628 SPACA4Q8TDM5 124 aa10.06□□□□□ -0.8
APOE-205ENST00000485628 C14orf144Q96I85 54 aa10.06□□□□□ -0.8
APOE-205ENST00000485628 TP73-AS1Q9UF72 201 aa10.06□□□□□ -0.8
APOE-205ENST00000485628 KRTAP7-1Q8IUC3 87 aa10.05□□□□□ -0.8
APOE-205ENST00000485628 CHTF8P0CG12 524 aa10.04□□□□□ -0.8
APOE-205ENST00000485628 S100A12P80511 92 aa10.04□□□□□ -0.8
APOE-205ENST00000485628 MEIG1Q5JSS6 88 aa10.04□□□□□ -0.8
APOE-205ENST00000485628 LINC00518Q8N0U6 118 aa10.04□□□□□ -0.8
APOE-205ENST00000485628 SND1-IT1Q9HBX3 110 aa10.04□□□□□ -0.8
APOE-205ENST00000485628 LINC00474Q9P2X8 69 aa10.04□□□□□ -0.8
APOE-205ENST00000485628 LINC00158P58513 81 aa10.03□□□□□ -0.8
APOE-205ENST00000485628 RPL18AQ02543 176 aaKnown RBP10.03□□□□□ -0.8
APOE-205ENST00000485628 GAGE2BQ13066 116 aa10.03□□□□□ -0.8
APOE-205ENST00000485628 MIR7-3HGQ8N6C7 128 aa10.03□□□□□ -0.8
APOE-205ENST00000485628 PPDPFQ9H3Y8 114 aa10.03□□□□□ -0.8
APOE-205ENST00000485628 EIF4EBP3O60516 100 aaPredicted RBP10.02□□□□□ -0.81
APOE-205ENST00000485628 GAGE2EQ4V326 116 aa10.02□□□□□ -0.81
APOE-205ENST00000485628 SLC25A34Q6PIV7 304 aa10.02□□□□□ -0.81
APOE-205ENST00000485628 C2orf91Q6ZV80 131 aa10.02□□□□□ -0.81
APOE-205ENST00000485628 C12orf57Q99622 126 aa10.02□□□□□ -0.81
APOE-205ENST00000485628 SPANXDQ9BXN6 97 aa10.02□□□□□ -0.81
APOE-205ENST00000485628 SPANXB1Q9NS25 103 aaPredicted RBP10.02□□□□□ -0.81
APOE-205ENST00000485628 SPANXCQ9NY87 97 aa10.02□□□□□ -0.81
APOE-205ENST00000485628 HIGD1BQ9P298 99 aa10.02□□□□□ -0.81
APOE-205ENST00000485628 GAGE2DQ9UEU5 116 aa10.02□□□□□ -0.81
APOE-205ENST00000485628 PLA2G2DQ9UNK4 145 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms