RNA–Protein interactions for RNA: ENST00000484077.1

RIF1-210, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-210ENST00000484077 GNB1LQ9BYB4 327 aa3.92□□□□□ -1.78
RIF1-210ENST00000484077 NXT2Q9NPJ8 142 aaKnown RBP3.92□□□□□ -1.78
RIF1-210ENST00000484077 CYSLTR1Q9Y271 337 aa3.92□□□□□ -1.78
RIF1-210ENST00000484077 IGLV4-3A0A075B6K6 122 aa3.91□□□□□ -1.78
RIF1-210ENST00000484077 IGHV3-64A0A075B6Q5 118 aa3.91□□□□□ -1.78
RIF1-210ENST00000484077 IGHV1-58A0A0C4DH39 117 aa3.91□□□□□ -1.78
RIF1-210ENST00000484077 C1orf196B1AJZ1 125 aa3.91□□□□□ -1.78
RIF1-210ENST00000484077 K7EMI3 77 aa3.91□□□□□ -1.78
RIF1-210ENST00000484077 MRPS36P82909 103 aaKnown RBP3.91□□□□□ -1.78
RIF1-210ENST00000484077 FAT1Q14517 4588 aa3.91□□□□□ -1.78
RIF1-210ENST00000484077 C2orf66Q6UXQ4 117 aa3.91□□□□□ -1.78
RIF1-210ENST00000484077 TGIF2-C20orf24A0A0A6YYL0 155 aa3.9□□□□□ -1.79
RIF1-210ENST00000484077 COX7A2LO14548 114 aa3.9□□□□□ -1.79
RIF1-210ENST00000484077 Q6ZN92 141 aa3.9□□□□□ -1.79
RIF1-210ENST00000484077 TEX43Q6ZNM6 134 aa3.9□□□□□ -1.79
RIF1-210ENST00000484077 TMEM141Q96I45 108 aa3.9□□□□□ -1.79
RIF1-210ENST00000484077 CARD19Q96LW7 228 aa3.9□□□□□ -1.79
RIF1-210ENST00000484077 C2orf88Q9BSF0 95 aa3.9□□□□□ -1.79
RIF1-210ENST00000484077 CHAC1Q9BUX1 264 aa3.9□□□□□ -1.79
RIF1-210ENST00000484077 APOMO95445 188 aa3.89□□□□□ -1.79
RIF1-210ENST00000484077 SPAG11BQ08648 103 aa3.89□□□□□ -1.79
RIF1-210ENST00000484077 Q6ZRP5 223 aa3.89□□□□□ -1.79
RIF1-210ENST00000484077 CIRBP-AS1Q8TBR5 109 aa3.89□□□□□ -1.79
RIF1-210ENST00000484077 FAM104AQ969W3 186 aa3.89□□□□□ -1.79
RIF1-210ENST00000484077 LINC00526Q96FQ7 95 aa3.89□□□□□ -1.79
RIF1-210ENST00000484077 ALKBH7Q9BT30 221 aaPredicted RBP3.89□□□□□ -1.79
RIF1-210ENST00000484077 SMCO4Q9NRQ5 59 aa3.89□□□□□ -1.79
RIF1-210ENST00000484077 PKIGQ9Y2B9 76 aa3.89□□□□□ -1.79
RIF1-210ENST00000484077 PKHD1L1Q86WI1 4243 aa3.89□□□□□ -1.79
RIF1-210ENST00000484077 PANO1I0J062 215 aa3.88□□□□□ -1.79
RIF1-210ENST00000484077 CHTF8P0CG12 524 aa3.88□□□□□ -1.79
RIF1-210ENST00000484077 G0S2P27469 103 aa3.88□□□□□ -1.79
RIF1-210ENST00000484077 FABP9Q0Z7S8 132 aa3.88□□□□□ -1.79
RIF1-210ENST00000484077 CIRBPQ14011 172 aaKnown RBP3.88□□□□□ -1.79
RIF1-210ENST00000484077 LINC00173Q6ZV60 143 aa3.88□□□□□ -1.79
RIF1-210ENST00000484077 FA2HQ7L5A8 372 aa3.88□□□□□ -1.79
RIF1-210ENST00000484077 C5orf38Q86SI9 138 aa3.88□□□□□ -1.79
RIF1-210ENST00000484077 OR10D4PQ8NGN7 298 aa3.88□□□□□ -1.79
RIF1-210ENST00000484077 SPACA4Q8TDM5 124 aa3.88□□□□□ -1.79
RIF1-210ENST00000484077 ORAOV1Q8WV07 137 aa3.88□□□□□ -1.79
RIF1-210ENST00000484077 TIMM17AQ99595 171 aa3.88□□□□□ -1.79
RIF1-210ENST00000484077 TRAPPC1Q9Y5R8 145 aa3.88□□□□□ -1.79
RIF1-210ENST00000484077 IGLV4-69A0A075B6H9 119 aa3.87□□□□□ -1.79
RIF1-210ENST00000484077 IGHV3OR16-9A0A0B4J2B5 98 aa3.87□□□□□ -1.79
RIF1-210ENST00000484077 IGKV2-24A0A0C4DH68 120 aa3.87□□□□□ -1.79
RIF1-210ENST00000484077 LINC01546A6NGU7 62 aa3.87□□□□□ -1.79
RIF1-210ENST00000484077 UBE2D1P51668 147 aa3.87□□□□□ -1.79
RIF1-210ENST00000484077 COX6A2Q02221 97 aa3.87□□□□□ -1.79
RIF1-210ENST00000484077 SYCNQ0VAF6 134 aa3.87□□□□□ -1.79
RIF1-210ENST00000484077 SDIM1Q6ZPB5 146 aa3.87□□□□□ -1.79
RIF1-210ENST00000484077 Q6ZRU5 148 aa3.87□□□□□ -1.79
RIF1-210ENST00000484077 CBLN2Q8IUK8 224 aa3.87□□□□□ -1.79
RIF1-210ENST00000484077 C18orf32Q8TCD1 76 aa3.87□□□□□ -1.79
RIF1-210ENST00000484077 TOMM6Q96B49 74 aa3.87□□□□□ -1.79
RIF1-210ENST00000484077 CAMK2N2Q96S95 79 aa3.87□□□□□ -1.79
RIF1-210ENST00000484077 AMELXQ99217 191 aa3.87□□□□□ -1.79
RIF1-210ENST00000484077 A0A087WZ39 114 aa3.86□□□□□ -1.79
RIF1-210ENST00000484077 A0A096LNI7 61 aa3.86□□□□□ -1.79
RIF1-210ENST00000484077 LINC01549A6NIU2 74 aa3.86□□□□□ -1.79
RIF1-210ENST00000484077 IGIPA6NJ69 53 aa3.86□□□□□ -1.79
RIF1-210ENST00000484077 INAFM2P0DMQ5 153 aa3.86□□□□□ -1.79
RIF1-210ENST00000484077 LINC00242Q5T6M2 205 aa3.86□□□□□ -1.79
RIF1-210ENST00000484077 ERASQ7Z444 233 aa3.86□□□□□ -1.79
RIF1-210ENST00000484077 Q8N377 158 aa3.86□□□□□ -1.79
RIF1-210ENST00000484077 C2orf48Q96LS8 159 aa3.86□□□□□ -1.79
RIF1-210ENST00000484077 YPEL4Q96NS1 127 aa3.86□□□□□ -1.79
RIF1-210ENST00000484077 VCX2Q9H322 139 aa3.86□□□□□ -1.79
RIF1-210ENST00000484077 A0A096LNJ9 63 aa3.85□□□□□ -1.79
RIF1-210ENST00000484077 LOC107984640A0A0U1RRK4 108 aa3.85□□□□□ -1.79
RIF1-210ENST00000484077 NDUFA1O15239 70 aa3.85□□□□□ -1.79
RIF1-210ENST00000484077 RPL37AP61513 92 aaKnown RBP3.85□□□□□ -1.79
RIF1-210ENST00000484077 HERVK_113P63121 156 aa3.85□□□□□ -1.79
RIF1-210ENST00000484077 RPL18AQ02543 176 aaKnown RBP3.85□□□□□ -1.79
RIF1-210ENST00000484077 MAJINQ3KP22 176 aa3.85□□□□□ -1.79
RIF1-210ENST00000484077 FAM19A3Q7Z5A8 133 aa3.85□□□□□ -1.79
RIF1-210ENST00000484077 SLC7A5P1Q8MH63 180 aa3.85□□□□□ -1.79
RIF1-210ENST00000484077 SCGB3A1Q96QR1 104 aa3.85□□□□□ -1.79
RIF1-210ENST00000484077 LINC00474Q9P2X8 69 aa3.85□□□□□ -1.79
RIF1-210ENST00000484077 MYCBP2O75592 4640 aa3.85□□□□□ -1.79
RIF1-210ENST00000484077 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.84□□□□□ -1.79
RIF1-210ENST00000484077 HBDP02042 147 aa3.84□□□□□ -1.79
RIF1-210ENST00000484077 SEC11AP67812 179 aa3.84□□□□□ -1.79
RIF1-210ENST00000484077 LINC01561Q8N1V8 128 aa3.84□□□□□ -1.79
RIF1-210ENST00000484077 Q8NBF4 154 aa3.84□□□□□ -1.79
RIF1-210ENST00000484077 PACRGQ96M98 296 aaPredicted RBP3.84□□□□□ -1.79
RIF1-210ENST00000484077 GEMIN7Q9H840 131 aaKnown RBP3.84□□□□□ -1.79
RIF1-210ENST00000484077 MRPL35Q9NZE8 188 aaKnown RBP3.84□□□□□ -1.79
RIF1-210ENST00000484077 PLAC8Q9NZF1 115 aa3.84□□□□□ -1.79
RIF1-210ENST00000484077 SRRM2Q9UQ35 2752 aaKnown RBP3.83□□□□□ -1.8
RIF1-210ENST00000484077 A0A0J9YXV3 536 aa3.83□□□□□ -1.8
RIF1-210ENST00000484077 TINCRA0A1B0GVN0 87 aa3.83□□□□□ -1.8
RIF1-210ENST00000484077 F8WDY8 70 aa3.83□□□□□ -1.8
RIF1-210ENST00000484077 LINC00614P0C842 121 aa3.83□□□□□ -1.8
RIF1-210ENST00000484077 KRTAP10-4P60372 401 aaPredicted RBP3.83□□□□□ -1.8
RIF1-210ENST00000484077 RAB5BP61020 215 aa3.83□□□□□ -1.8
RIF1-210ENST00000484077 PMVKQ15126 192 aa3.83□□□□□ -1.8
RIF1-210ENST00000484077 PMCHL1Q16048 86 aa3.83□□□□□ -1.8
RIF1-210ENST00000484077 LINC00469Q8N7U9 141 aa3.83□□□□□ -1.8
RIF1-210ENST00000484077 C7orf33Q8WU49 177 aa3.83□□□□□ -1.8
RIF1-210ENST00000484077 TOMM7Q9P0U1 55 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms