RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 C9orf163Q8N9P6 203 aa6.15□□□□□ -1.42
HMG20B-210ENST00000483417 CHAC1Q9BUX1 264 aa6.15□□□□□ -1.42
HMG20B-210ENST00000483417 SRRM2Q9UQ35 2752 aaKnown RBP6.14□□□□□ -1.43
HMG20B-210ENST00000483417 C5orf52A6NGY3 159 aa6.14□□□□□ -1.43
HMG20B-210ENST00000483417 F8VRH5 84 aa6.14□□□□□ -1.43
HMG20B-210ENST00000483417 SYS1-DBNDD2H3BUS1 97 aa6.14□□□□□ -1.43
HMG20B-210ENST00000483417 SYCNQ0VAF6 134 aa6.14□□□□□ -1.43
HMG20B-210ENST00000483417 LINC01561Q8N1V8 128 aa6.14□□□□□ -1.43
HMG20B-210ENST00000483417 TOMM7Q9P0U1 55 aa6.14□□□□□ -1.43
HMG20B-210ENST00000483417 APOMO95445 188 aa6.13□□□□□ -1.43
HMG20B-210ENST00000483417 C9orf116Q5BN46 136 aaPredicted RBP6.13□□□□□ -1.43
HMG20B-210ENST00000483417 TMEM170BQ5T4T1 132 aa6.13□□□□□ -1.43
HMG20B-210ENST00000483417 LINC00528Q8N1L1 170 aa6.13□□□□□ -1.43
HMG20B-210ENST00000483417 CIRBP-AS1Q8TBR5 109 aa6.13□□□□□ -1.43
HMG20B-210ENST00000483417 HIST1H2BLQ99880 126 aa6.13□□□□□ -1.43
HMG20B-210ENST00000483417 MAP1LC3CQ9BXW4 147 aa6.13□□□□□ -1.43
HMG20B-210ENST00000483417 PKHD1L1Q86WI1 4243 aa6.13□□□□□ -1.43
HMG20B-210ENST00000483417 IGLV5-39A0A0G2JS06 123 aa6.12□□□□□ -1.43
HMG20B-210ENST00000483417 TMEM223A0PJW6 202 aa6.12□□□□□ -1.43
HMG20B-210ENST00000483417 S100A6P06703 90 aa6.12□□□□□ -1.43
HMG20B-210ENST00000483417 CHTF8P0CG12 524 aa6.12□□□□□ -1.43
HMG20B-210ENST00000483417 KRTDAPP60985 99 aa6.12□□□□□ -1.43
HMG20B-210ENST00000483417 C6orf226Q5I0X4 101 aa6.12□□□□□ -1.43
HMG20B-210ENST00000483417 OR10D4PQ8NGN7 298 aa6.12□□□□□ -1.43
HMG20B-210ENST00000483417 C2orf48Q96LS8 159 aa6.12□□□□□ -1.43
HMG20B-210ENST00000483417 CAMK2N2Q96S95 79 aa6.12□□□□□ -1.43
HMG20B-210ENST00000483417 C6orf48Q9UBA6 75 aa6.12□□□□□ -1.43
HMG20B-210ENST00000483417 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.12□□□□□ -1.43
HMG20B-210ENST00000483417 FAT3Q8TDW7 4589 aa6.12□□□□□ -1.43
HMG20B-210ENST00000483417 PLA2G1BP04054 148 aaKnown RBP6.11□□□□□ -1.43
HMG20B-210ENST00000483417 COX7B2Q8TF08 81 aa6.11□□□□□ -1.43
HMG20B-210ENST00000483417 PACRGQ96M98 296 aaPredicted RBP6.11□□□□□ -1.43
HMG20B-210ENST00000483417 TMA7Q9Y2S6 64 aaKnown RBP6.11□□□□□ -1.43
HMG20B-210ENST00000483417 DPM2O94777 84 aa6.1□□□□□ -1.43
HMG20B-210ENST00000483417 LINC01545Q5VT33 79 aa6.1□□□□□ -1.43
HMG20B-210ENST00000483417 PET117Q6UWS5 81 aa6.1□□□□□ -1.43
HMG20B-210ENST00000483417 Q8IZM0 81 aa6.1□□□□□ -1.43
HMG20B-210ENST00000483417 STPG4Q8N801 248 aa6.1□□□□□ -1.43
HMG20B-210ENST00000483417 CARD19Q96LW7 228 aa6.1□□□□□ -1.43
HMG20B-210ENST00000483417 LRP1Q07954 4544 aaKnown RBP6.1□□□□□ -1.43
HMG20B-210ENST00000483417 A0A096LNI7 61 aa6.09□□□□□ -1.43
HMG20B-210ENST00000483417 KRTAP29-1A8MX34 341 aaPredicted RBP6.09□□□□□ -1.43
HMG20B-210ENST00000483417 H3BRM9 83 aa6.09□□□□□ -1.43
HMG20B-210ENST00000483417 NDUFA1O15239 70 aa6.09□□□□□ -1.43
HMG20B-210ENST00000483417 IGKCP01834 107 aa6.09□□□□□ -1.43
HMG20B-210ENST00000483417 PRSS2P07478 247 aa6.09□□□□□ -1.43
HMG20B-210ENST00000483417 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.08□□□□□ -1.44
HMG20B-210ENST00000483417 S100A2P29034 98 aa6.08□□□□□ -1.44
HMG20B-210ENST00000483417 TSPEAR-AS2P59090 65 aa6.08□□□□□ -1.44
HMG20B-210ENST00000483417 ATOH7Q8N100 152 aa6.08□□□□□ -1.44
HMG20B-210ENST00000483417 ZNF625Q96I27 306 aaPredicted RBP6.08□□□□□ -1.44
HMG20B-210ENST00000483417 FLG2Q5D862 2391 aaPredicted RBP6.07□□□□□ -1.44
HMG20B-210ENST00000483417 IGKV2-24A0A0C4DH68 120 aa6.07□□□□□ -1.44
HMG20B-210ENST00000483417 CKS1BP61024 79 aa6.07□□□□□ -1.44
HMG20B-210ENST00000483417 GAGE2BQ13066 116 aa6.07□□□□□ -1.44
HMG20B-210ENST00000483417 CIRBPQ14011 172 aaKnown RBP6.07□□□□□ -1.44
HMG20B-210ENST00000483417 RNF151Q2KHN1 245 aa6.07□□□□□ -1.44
HMG20B-210ENST00000483417 MAJINQ3KP22 176 aa6.07□□□□□ -1.44
HMG20B-210ENST00000483417 Q6ZRP5 223 aa6.07□□□□□ -1.44
HMG20B-210ENST00000483417 IGKV2D-26A0A0A0MRZ7 120 aa6.06□□□□□ -1.44
HMG20B-210ENST00000483417 A0A1W2PNN7 141 aa6.06□□□□□ -1.44
HMG20B-210ENST00000483417 F8WDY8 70 aa6.06□□□□□ -1.44
HMG20B-210ENST00000483417 PLNP26678 52 aa6.06□□□□□ -1.44
HMG20B-210ENST00000483417 GAGE2EQ4V326 116 aa6.06□□□□□ -1.44
HMG20B-210ENST00000483417 KRTAP7-1Q8IUC3 87 aa6.06□□□□□ -1.44
HMG20B-210ENST00000483417 DPH3Q96FX2 82 aa6.06□□□□□ -1.44
HMG20B-210ENST00000483417 GAGE2DQ9UEU5 116 aa6.06□□□□□ -1.44
HMG20B-210ENST00000483417 A0A087WYN8 130 aa6.05□□□□□ -1.44
HMG20B-210ENST00000483417 LOC107984640A0A0U1RRK4 108 aa6.05□□□□□ -1.44
HMG20B-210ENST00000483417 FAM168BA1KXE4 195 aa6.05□□□□□ -1.44
HMG20B-210ENST00000483417 LEPROTO15243 131 aa6.05□□□□□ -1.44
HMG20B-210ENST00000483417 PTTG1IPP53801 180 aa6.05□□□□□ -1.44
HMG20B-210ENST00000483417 TTTY13Q9BZ97 58 aa6.05□□□□□ -1.44
HMG20B-210ENST00000483417 TRBV30A0A0K0K1B3 111 aa6.04□□□□□ -1.44
HMG20B-210ENST00000483417 TLX1NBP0CAT3 122 aa6.04□□□□□ -1.44
HMG20B-210ENST00000483417 ANKRD39Q53RE8 183 aa6.04□□□□□ -1.44
HMG20B-210ENST00000483417 C9orf129Q5T035 196 aaKnown RBP6.04□□□□□ -1.44
HMG20B-210ENST00000483417 SPACA4Q8TDM5 124 aa6.04□□□□□ -1.44
HMG20B-210ENST00000483417 A0A0U1RRA0 63 aa6.03□□□□□ -1.44
HMG20B-210ENST00000483417 J3QL48 77 aa6.03□□□□□ -1.44
HMG20B-210ENST00000483417 J3QQQ9 107 aa6.03□□□□□ -1.44
HMG20B-210ENST00000483417 PFN2P35080 140 aa6.03□□□□□ -1.44
HMG20B-210ENST00000483417 HNRNPA3P51991 378 aaKnown RBP6.03□□□□□ -1.44
HMG20B-210ENST00000483417 RPL18AQ02543 176 aaKnown RBP6.03□□□□□ -1.44
HMG20B-210ENST00000483417 XAGE1AQ9HD64 81 aa6.03□□□□□ -1.44
HMG20B-210ENST00000483417 E9PLD3 99 aa6.02□□□□□ -1.45
HMG20B-210ENST00000483417 NDUFC2-KCTD14E9PQ53 114 aa6.02□□□□□ -1.45
HMG20B-210ENST00000483417 SCGB1D1O95968 90 aa6.02□□□□□ -1.45
HMG20B-210ENST00000483417 OXTP01178 125 aa6.02□□□□□ -1.45
HMG20B-210ENST00000483417 NDUFA12Q9UI09 145 aa6.02□□□□□ -1.45
HMG20B-210ENST00000483417 DMBT1Q9UGM3 2413 aaPredicted RBP6.01□□□□□ -1.45
HMG20B-210ENST00000483417 SMIM13P0DJ93 91 aa6.01□□□□□ -1.45
HMG20B-210ENST00000483417 CXCL5P42830 114 aa6.01□□□□□ -1.45
HMG20B-210ENST00000483417 RPL37AP61513 92 aaKnown RBP6.01□□□□□ -1.45
HMG20B-210ENST00000483417 PLEKHB2Q96CS7 222 aa6.01□□□□□ -1.45
HMG20B-210ENST00000483417 PLAC8Q9NZF1 115 aa6.01□□□□□ -1.45
HMG20B-210ENST00000483417 ERG28Q9UKR5 140 aa6.01□□□□□ -1.45
HMG20B-210ENST00000483417 HERVK_113P61574 105 aa6□□□□□ -1.45
HMG20B-210ENST00000483417 ADAMTSL4-AS1Q5T5F5 129 aa6□□□□□ -1.45
HMG20B-210ENST00000483417 SERTAD4-AS1Q5TG53 156 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms