RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 IGLV5-45A0A087WSX0 123 aa8.45□□□□□ -1.06
SSR1-208ENST00000483409 ATP5LO75964 103 aa8.45□□□□□ -1.06
SSR1-208ENST00000483409 KRTAP10-4P60372 401 aaPredicted RBP8.45□□□□□ -1.06
SSR1-208ENST00000483409 SMIM1B2RUZ4 78 aa8.44□□□□□ -1.06
SSR1-208ENST00000483409 SPINK8P0C7L1 97 aa8.44□□□□□ -1.06
SSR1-208ENST00000483409 C6orf226Q5I0X4 101 aa8.44□□□□□ -1.06
SSR1-208ENST00000483409 Q8IZM0 81 aa8.44□□□□□ -1.06
SSR1-208ENST00000483409 HSBP1O75506 76 aa8.43□□□□□ -1.06
SSR1-208ENST00000483409 IGLC3P0DOY3 106 aa8.43□□□□□ -1.06
SSR1-208ENST00000483409 CKS1BP61024 79 aa8.43□□□□□ -1.06
SSR1-208ENST00000483409 FAM19A2Q8N3H0 131 aa8.43□□□□□ -1.06
SSR1-208ENST00000483409 TRBV30A0A0K0K1B3 111 aa8.42□□□□□ -1.06
SSR1-208ENST00000483409 C9orf116Q5BN46 136 aaPredicted RBP8.42□□□□□ -1.06
SSR1-208ENST00000483409 Q6ZRP5 223 aa8.42□□□□□ -1.06
SSR1-208ENST00000483409 PKHD1L1Q86WI1 4243 aa8.42□□□□□ -1.06
SSR1-208ENST00000483409 A0A1W2PNN7 141 aa8.41□□□□□ -1.06
SSR1-208ENST00000483409 H3BRM9 83 aa8.41□□□□□ -1.06
SSR1-208ENST00000483409 SERF1AO75920 110 aa8.41□□□□□ -1.06
SSR1-208ENST00000483409 TLX1NBP0CAT3 122 aa8.41□□□□□ -1.06
SSR1-208ENST00000483409 LINC00310P59036 64 aa8.41□□□□□ -1.06
SSR1-208ENST00000483409 GAGE2EQ4V326 116 aa8.41□□□□□ -1.06
SSR1-208ENST00000483409 COX7B2Q8TF08 81 aa8.41□□□□□ -1.06
SSR1-208ENST00000483409 C7orf33Q8WU49 177 aa8.41□□□□□ -1.06
SSR1-208ENST00000483409 IFI27L1Q96BM0 104 aa8.41□□□□□ -1.06
SSR1-208ENST00000483409 GAGE2DQ9UEU5 116 aa8.41□□□□□ -1.06
SSR1-208ENST00000483409 ZNF22P17026 224 aaPredicted RBP8.4□□□□□ -1.06
SSR1-208ENST00000483409 C11orf86A6NJI1 115 aa8.39□□□□□ -1.07
SSR1-208ENST00000483409 NDUFC2-KCTD14E9PQ53 114 aa8.39□□□□□ -1.07
SSR1-208ENST00000483409 F8VRH5 84 aa8.39□□□□□ -1.07
SSR1-208ENST00000483409 MYCBP2O75592 4640 aa8.38□□□□□ -1.07
SSR1-208ENST00000483409 FAM168BA1KXE4 195 aa8.38□□□□□ -1.07
SSR1-208ENST00000483409 NUPR1O60356 82 aa8.38□□□□□ -1.07
SSR1-208ENST00000483409 CXCL5P42830 114 aa8.38□□□□□ -1.07
SSR1-208ENST00000483409 HNRNPA3P51991 378 aaKnown RBP8.38□□□□□ -1.07
SSR1-208ENST00000483409 CHTOPQ9Y3Y2 248 aaKnown RBP8.38□□□□□ -1.07
SSR1-208ENST00000483409 TMEM170BQ5T4T1 132 aa8.37□□□□□ -1.07
SSR1-208ENST00000483409 TRAV12-1A0A0B4J245 112 aa8.36□□□□□ -1.07
SSR1-208ENST00000483409 H0Y8G0 127 aa8.36□□□□□ -1.07
SSR1-208ENST00000483409 LEPROTL1O95214 131 aa8.36□□□□□ -1.07
SSR1-208ENST00000483409 FAM19A5Q7Z5A7 132 aaPredicted RBP8.36□□□□□ -1.07
SSR1-208ENST00000483409 IGLV5-39A0A0G2JS06 123 aa8.35□□□□□ -1.07
SSR1-208ENST00000483409 PRR3P79522 188 aaKnown RBP8.35□□□□□ -1.07
SSR1-208ENST00000483409 C9orf129Q5T035 196 aaKnown RBP8.35□□□□□ -1.07
SSR1-208ENST00000483409 PHF5AQ7RTV0 110 aaKnown RBP8.35□□□□□ -1.07
SSR1-208ENST00000483409 HIST1H2BKO60814 126 aa8.34□□□□□ -1.07
SSR1-208ENST00000483409 HIST1H2BJP06899 126 aa8.34□□□□□ -1.07
SSR1-208ENST00000483409 FABP4P15090 132 aa8.34□□□□□ -1.07
SSR1-208ENST00000483409 HIST1H2BOP23527 126 aa8.34□□□□□ -1.07
SSR1-208ENST00000483409 HIST1H2BBP33778 126 aa8.34□□□□□ -1.07
SSR1-208ENST00000483409 HIST1H2BDP58876 126 aa8.34□□□□□ -1.07
SSR1-208ENST00000483409 HIST1H2BCP62807 126 aa8.34□□□□□ -1.07
SSR1-208ENST00000483409 HIST2H2BEQ16778 126 aa8.34□□□□□ -1.07
SSR1-208ENST00000483409 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.34□□□□□ -1.07
SSR1-208ENST00000483409 HIST1H2BHQ93079 126 aa8.34□□□□□ -1.07
SSR1-208ENST00000483409 HIST1H2BNQ99877 126 aa8.34□□□□□ -1.07
SSR1-208ENST00000483409 HIST1H2BMQ99879 126 aa8.34□□□□□ -1.07
SSR1-208ENST00000483409 XAGE1AQ9HD64 81 aa8.34□□□□□ -1.07
SSR1-208ENST00000483409 HSPB8Q9UJY1 196 aa8.33□□□□□ -1.08
SSR1-208ENST00000483409 ODF1Q14990 250 aa8.32□□□□□ -1.08
SSR1-208ENST00000483409 KRTAP7-1Q8IUC3 87 aa8.32□□□□□ -1.08
SSR1-208ENST00000483409 TMEM223A0PJW6 202 aa8.31□□□□□ -1.08
SSR1-208ENST00000483409 M0QXV9 152 aa8.31□□□□□ -1.08
SSR1-208ENST00000483409 SERTAD4-AS1Q5TG53 156 aa8.3□□□□□ -1.08
SSR1-208ENST00000483409 LRP1Q07954 4544 aaKnown RBP8.29□□□□□ -1.08
SSR1-208ENST00000483409 FAT3Q8TDW7 4589 aa8.29□□□□□ -1.08
SSR1-208ENST00000483409 J3QL48 77 aa8.29□□□□□ -1.08
SSR1-208ENST00000483409 ATP6V1G1O75348 118 aa8.29□□□□□ -1.08
SSR1-208ENST00000483409 ZNF625Q96I27 306 aaPredicted RBP8.29□□□□□ -1.08
SSR1-208ENST00000483409 PMCHL2Q9BQD1 86 aa8.29□□□□□ -1.08
SSR1-208ENST00000483409 PSORS1C2Q9UIG4 136 aa8.29□□□□□ -1.08
SSR1-208ENST00000483409 DMBT1Q9UGM3 2413 aaPredicted RBP8.29□□□□□ -1.08
SSR1-208ENST00000483409 KRTAP29-1A8MX34 341 aaPredicted RBP8.28□□□□□ -1.08
SSR1-208ENST00000483409 PFN2P35080 140 aa8.28□□□□□ -1.08
SSR1-208ENST00000483409 KRTAP11-1Q8IUC1 163 aa8.28□□□□□ -1.08
SSR1-208ENST00000483409 S100A1P23297 94 aa8.27□□□□□ -1.09
SSR1-208ENST00000483409 UBE2BP63146 152 aa8.27□□□□□ -1.09
SSR1-208ENST00000483409 MAP1LC3CQ9BXW4 147 aa8.27□□□□□ -1.09
SSR1-208ENST00000483409 ERG28Q9UKR5 140 aa8.27□□□□□ -1.09
SSR1-208ENST00000483409 PLNP26678 52 aa8.26□□□□□ -1.09
SSR1-208ENST00000483409 C1orf137Q5JT78 98 aa8.26□□□□□ -1.09
SSR1-208ENST00000483409 C22orf24Q9Y442 160 aa8.26□□□□□ -1.09
SSR1-208ENST00000483409 DPM2O94777 84 aa8.25□□□□□ -1.09
SSR1-208ENST00000483409 OXTP01178 125 aa8.25□□□□□ -1.09
SSR1-208ENST00000483409 SFTA2Q6UW10 78 aa8.25□□□□□ -1.09
SSR1-208ENST00000483409 IGKCP01834 107 aa8.23□□□□□ -1.09
SSR1-208ENST00000483409 COX17Q14061 63 aa8.23□□□□□ -1.09
SSR1-208ENST00000483409 COA6Q5JTJ3 125 aaKnown RBP8.23□□□□□ -1.09
SSR1-208ENST00000483409 SPINK6Q6UWN8 80 aa8.23□□□□□ -1.09
SSR1-208ENST00000483409 SND1-IT1Q9HBX3 110 aa8.23□□□□□ -1.09
SSR1-208ENST00000483409 A0A0U1RRA0 63 aa8.22□□□□□ -1.09
SSR1-208ENST00000483409 SYS1-DBNDD2H3BUS1 97 aa8.22□□□□□ -1.09
SSR1-208ENST00000483409 TSPEAR-AS2P59090 65 aa8.22□□□□□ -1.09
SSR1-208ENST00000483409 SRSF9Q13242 221 aaKnown RBP eCLIP8.22□□□□□ -1.09
SSR1-208ENST00000483409 MRPL55Q7Z7F7 128 aaKnown RBP8.22□□□□□ -1.09
SSR1-208ENST00000483409 NDUFA12Q9UI09 145 aa8.22□□□□□ -1.09
SSR1-208ENST00000483409 PLA2G2DQ9UNK4 145 aa8.22□□□□□ -1.09
SSR1-208ENST00000483409 LEPROTO15243 131 aa8.21□□□□□ -1.1
SSR1-208ENST00000483409 LINC00158P58513 81 aa8.21□□□□□ -1.1
SSR1-208ENST00000483409 HERVK_113P61574 105 aa8.21□□□□□ -1.1
SSR1-208ENST00000483409 LBHQ53QV2 105 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms