RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 NMUP48645 174 aa5.45□□□□□ -1.54
USP4-210ENST00000483212 PLEKHB2Q96CS7 222 aa5.45□□□□□ -1.54
USP4-210ENST00000483212 RMI2Q96E14 147 aa5.45□□□□□ -1.54
USP4-210ENST00000483212 M0R2N4 97 aa5.44□□□□□ -1.54
USP4-210ENST00000483212 BOD1L2Q8IYS8 172 aa5.44□□□□□ -1.54
USP4-210ENST00000483212 Q8IZM0 81 aa5.44□□□□□ -1.54
USP4-210ENST00000483212 COX7B2Q8TF08 81 aa5.44□□□□□ -1.54
USP4-210ENST00000483212 ZNF625Q96I27 306 aaPredicted RBP5.44□□□□□ -1.54
USP4-210ENST00000483212 C14orf144Q96I85 54 aa5.44□□□□□ -1.54
USP4-210ENST00000483212 COX11Q9Y6N1 276 aa5.44□□□□□ -1.54
USP4-210ENST00000483212 DNAH11Q96DT5 4516 aa5.44□□□□□ -1.54
USP4-210ENST00000483212 FAT2Q9NYQ8 4349 aa5.43□□□□□ -1.54
USP4-210ENST00000483212 LCE6AA0A183 80 aa5.43□□□□□ -1.54
USP4-210ENST00000483212 DLEU1O43261 78 aa5.43□□□□□ -1.54
USP4-210ENST00000483212 MALP21145 153 aa5.43□□□□□ -1.54
USP4-210ENST00000483212 WFDC2Q14508 124 aa5.43□□□□□ -1.54
USP4-210ENST00000483212 ORAOV1Q8WV07 137 aa5.43□□□□□ -1.54
USP4-210ENST00000483212 TM2D2Q9BX73 214 aa5.43□□□□□ -1.54
USP4-210ENST00000483212 PRO1933Q9H354 126 aa5.43□□□□□ -1.54
USP4-210ENST00000483212 FRAS1Q86XX4 4008 aa5.43□□□□□ -1.54
USP4-210ENST00000483212 GVQW2A0A096LPI5 108 aaPredicted RBP5.42□□□□□ -1.54
USP4-210ENST00000483212 MYMXA0A1B0GTQ4 84 aa5.42□□□□□ -1.54
USP4-210ENST00000483212 LRCOL1A6NCL2 159 aa5.42□□□□□ -1.54
USP4-210ENST00000483212 USP17L23D6RBM5 183 aa5.42□□□□□ -1.54
USP4-210ENST00000483212 NDUFA1O15239 70 aa5.42□□□□□ -1.54
USP4-210ENST00000483212 APOMO95445 188 aa5.42□□□□□ -1.54
USP4-210ENST00000483212 LGALS3P17931 250 aaKnown RBP5.42□□□□□ -1.54
USP4-210ENST00000483212 SPAG11BQ08648 103 aa5.42□□□□□ -1.54
USP4-210ENST00000483212 C2orf91Q6ZV80 131 aa5.42□□□□□ -1.54
USP4-210ENST00000483212 C6orf223Q8N319 242 aa5.42□□□□□ -1.54
USP4-210ENST00000483212 NTN5Q8WTR8 489 aaPredicted RBP5.42□□□□□ -1.54
USP4-210ENST00000483212 ZNF815PA8K554 130 aa5.41□□□□□ -1.54
USP4-210ENST00000483212 HIGD2BQ4VC39 106 aa5.41□□□□□ -1.54
USP4-210ENST00000483212 SLC25A34Q6PIV7 304 aa5.41□□□□□ -1.54
USP4-210ENST00000483212 LINC00526Q96FQ7 95 aa5.41□□□□□ -1.54
USP4-210ENST00000483212 TOMM7Q9P0U1 55 aa5.41□□□□□ -1.54
USP4-210ENST00000483212 UQCR10Q9UDW1 63 aa5.41□□□□□ -1.54
USP4-210ENST00000483212 NDUFA12Q9UI09 145 aa5.41□□□□□ -1.54
USP4-210ENST00000483212 A0A0J9YXY3 114 aa5.4□□□□□ -1.54
USP4-210ENST00000483212 CXCL5P42830 114 aa5.4□□□□□ -1.54
USP4-210ENST00000483212 C10orf25Q5T742 122 aa5.4□□□□□ -1.54
USP4-210ENST00000483212 CFAP161Q6P656 301 aa5.4□□□□□ -1.54
USP4-210ENST00000483212 C2orf82Q6UX34 121 aa5.4□□□□□ -1.54
USP4-210ENST00000483212 LITAFQ99732 161 aa5.4□□□□□ -1.54
USP4-210ENST00000483212 MIEN1Q9BRT3 115 aa5.4□□□□□ -1.54
USP4-210ENST00000483212 DNAH5Q8TE73 4624 aa5.39□□□□□ -1.55
USP4-210ENST00000483212 TSTD3H0UI37 97 aa5.39□□□□□ -1.55
USP4-210ENST00000483212 LECT2O14960 151 aa5.39□□□□□ -1.55
USP4-210ENST00000483212 SLPIP03973 132 aa5.39□□□□□ -1.55
USP4-210ENST00000483212 PRSS2P07478 247 aa5.39□□□□□ -1.55
USP4-210ENST00000483212 C6orf226Q5I0X4 101 aa5.39□□□□□ -1.55
USP4-210ENST00000483212 C1orf134Q5TEV5 83 aa5.39□□□□□ -1.55
USP4-210ENST00000483212 UNQ6190/PRO20217Q6UXQ8 127 aa5.39□□□□□ -1.55
USP4-210ENST00000483212 C2orf48Q96LS8 159 aa5.39□□□□□ -1.55
USP4-210ENST00000483212 F8WDY8 70 aa5.38□□□□□ -1.55
USP4-210ENST00000483212 RTL8CO15255 209 aa5.38□□□□□ -1.55
USP4-210ENST00000483212 PSCAO43653 123 aa5.38□□□□□ -1.55
USP4-210ENST00000483212 HERV-K104P63124 156 aa5.38□□□□□ -1.55
USP4-210ENST00000483212 SFTA2Q6UW10 78 aa5.38□□□□□ -1.55
USP4-210ENST00000483212 Q6ZRU5 148 aa5.38□□□□□ -1.55
USP4-210ENST00000483212 HIGD1BQ9P298 99 aa5.38□□□□□ -1.55
USP4-210ENST00000483212 C6orf48Q9UBA6 75 aa5.38□□□□□ -1.55
USP4-210ENST00000483212 A0A087WTM6 91 aa5.37□□□□□ -1.55
USP4-210ENST00000483212 ZNF561-AS1K7EIQ3 104 aa5.37□□□□□ -1.55
USP4-210ENST00000483212 TIMM17BO60830 172 aa5.37□□□□□ -1.55
USP4-210ENST00000483212 DDTP30046 118 aa5.37□□□□□ -1.55
USP4-210ENST00000483212 CKS1BP61024 79 aa5.37□□□□□ -1.55
USP4-210ENST00000483212 ADAMTSL4-AS1Q5T5F5 129 aa5.37□□□□□ -1.55
USP4-210ENST00000483212 HNRNPA3P51991 378 aaKnown RBP5.36□□□□□ -1.55
USP4-210ENST00000483212 CNBPP62633 177 aaKnown RBP5.36□□□□□ -1.55
USP4-210ENST00000483212 TNP2Q05952 138 aa5.36□□□□□ -1.55
USP4-210ENST00000483212 CAMK2N2Q96S95 79 aa5.36□□□□□ -1.55
USP4-210ENST00000483212 SPANXB1Q9NS25 103 aaPredicted RBP5.36□□□□□ -1.55
USP4-210ENST00000483212 ERG28Q9UKR5 140 aa5.36□□□□□ -1.55
USP4-210ENST00000483212 PKD1P98161 4303 aa5.35□□□□□ -1.55
USP4-210ENST00000483212 TRBV30A0A0K0K1B3 111 aa5.35□□□□□ -1.55
USP4-210ENST00000483212 SMIM13P0DJ93 91 aa5.35□□□□□ -1.55
USP4-210ENST00000483212 SYCNQ0VAF6 134 aa5.35□□□□□ -1.55
USP4-210ENST00000483212 C14orf177Q52M58 125 aa5.35□□□□□ -1.55
USP4-210ENST00000483212 C9orf116Q5BN46 136 aaPredicted RBP5.35□□□□□ -1.55
USP4-210ENST00000483212 SCGB1D4Q6XE38 83 aa5.35□□□□□ -1.55
USP4-210ENST00000483212 Q8N814 137 aa5.35□□□□□ -1.55
USP4-210ENST00000483212 SPANXDQ9BXN6 97 aa5.35□□□□□ -1.55
USP4-210ENST00000483212 SPANXCQ9NY87 97 aa5.35□□□□□ -1.55
USP4-210ENST00000483212 EIF4EBP3O60516 100 aaPredicted RBP5.34□□□□□ -1.55
USP4-210ENST00000483212 RNF151Q2KHN1 245 aa5.34□□□□□ -1.55
USP4-210ENST00000483212 CARD19Q96LW7 228 aa5.34□□□□□ -1.55
USP4-210ENST00000483212 HECTD4Q9Y4D8 3996 aa5.34□□□□□ -1.56
USP4-210ENST00000483212 A0A0U1RRA0 63 aa5.33□□□□□ -1.56
USP4-210ENST00000483212 TMEM238C9JI98 176 aa5.33□□□□□ -1.56
USP4-210ENST00000483212 TLX1NBP0CAT3 122 aa5.33□□□□□ -1.56
USP4-210ENST00000483212 PTTG1IPP53801 180 aa5.33□□□□□ -1.56
USP4-210ENST00000483212 CTAG1AP78358 180 aa5.33□□□□□ -1.56
USP4-210ENST00000483212 HSD52Q0P140 79 aa5.33□□□□□ -1.56
USP4-210ENST00000483212 COX17Q14061 63 aa5.33□□□□□ -1.56
USP4-210ENST00000483212 TAL2Q16559 108 aa5.33□□□□□ -1.56
USP4-210ENST00000483212 MEIG1Q5JSS6 88 aa5.33□□□□□ -1.56
USP4-210ENST00000483212 SOSTDC1Q6X4U4 206 aa5.33□□□□□ -1.56
USP4-210ENST00000483212 DAND5Q8N907 189 aa5.33□□□□□ -1.56
USP4-210ENST00000483212 PPDPFQ9H3Y8 114 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms