RNA–Protein interactions for RNA: ENST00000482257.1

HLA-F-225, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-225ENST00000482257 KIAA0087Q14695 138 aa10.13□□□□□ -0.79
HLA-F-225ENST00000482257 STPG4Q8N801 248 aa10.13□□□□□ -0.79
HLA-F-225ENST00000482257 CAMK2N2Q96S95 79 aa10.13□□□□□ -0.79
HLA-F-225ENST00000482257 CNBPP62633 177 aaKnown RBP10.12□□□□□ -0.79
HLA-F-225ENST00000482257 DNAH5Q8TE73 4624 aa10.11□□□□□ -0.79
HLA-F-225ENST00000482257 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.11□□□□□ -0.79
HLA-F-225ENST00000482257 J3QQQ9 107 aa10.11□□□□□ -0.79
HLA-F-225ENST00000482257 LGALS3P17931 250 aaKnown RBP10.11□□□□□ -0.79
HLA-F-225ENST00000482257 SYCNQ0VAF6 134 aa10.11□□□□□ -0.79
HLA-F-225ENST00000482257 LINC00526Q96FQ7 95 aa10.11□□□□□ -0.79
HLA-F-225ENST00000482257 NMUP48645 174 aa10.1□□□□□ -0.79
HLA-F-225ENST00000482257 PYY3Q5JQD4 70 aa10.1□□□□□ -0.79
HLA-F-225ENST00000482257 CARD19Q96LW7 228 aa10.1□□□□□ -0.79
HLA-F-225ENST00000482257 PGPEP1Q9NXJ5 209 aa10.1□□□□□ -0.79
HLA-F-225ENST00000482257 CDPF1Q6NVV7 123 aa10.09□□□□□ -0.79
HLA-F-225ENST00000482257 VAMP8Q9BV40 100 aa10.09□□□□□ -0.79
HLA-F-225ENST00000482257 PKIGQ9Y2B9 76 aa10.09□□□□□ -0.79
HLA-F-225ENST00000482257 HSPG2P98160 4391 aa10.08□□□□□ -0.8
HLA-F-225ENST00000482257 IGLV5-52A0A0A0MRZ9 124 aa10.08□□□□□ -0.8
HLA-F-225ENST00000482257 TRBV30A0A0K0K1B3 111 aa10.08□□□□□ -0.8
HLA-F-225ENST00000482257 MYMXA0A1B0GTQ4 84 aa10.08□□□□□ -0.8
HLA-F-225ENST00000482257 LOC105371267A0A1B0GV96 52 aa10.08□□□□□ -0.8
HLA-F-225ENST00000482257 RNF151Q2KHN1 245 aa10.08□□□□□ -0.8
HLA-F-225ENST00000482257 C2orf82Q6UX34 121 aa10.08□□□□□ -0.8
HLA-F-225ENST00000482257 NDUFA12Q9UI09 145 aa10.08□□□□□ -0.8
HLA-F-225ENST00000482257 PCLOQ9Y6V0 5065 aa10.07□□□□□ -0.8
HLA-F-225ENST00000482257 HERV-K104P63124 156 aa10.07□□□□□ -0.8
HLA-F-225ENST00000482257 ANKRD39Q53RE8 183 aa10.07□□□□□ -0.8
HLA-F-225ENST00000482257 Q6ZRU5 148 aa10.07□□□□□ -0.8
HLA-F-225ENST00000482257 SLPIP03973 132 aa10.06□□□□□ -0.8
HLA-F-225ENST00000482257 S100A12P80511 92 aa10.06□□□□□ -0.8
HLA-F-225ENST00000482257 MAJINQ3KP22 176 aa10.06□□□□□ -0.8
HLA-F-225ENST00000482257 UNQ6190/PRO20217Q6UXQ8 127 aa10.06□□□□□ -0.8
HLA-F-225ENST00000482257 LINC00587B1AMM8 73 aa10.05□□□□□ -0.8
HLA-F-225ENST00000482257 SMIM6P0DI80 62 aa10.05□□□□□ -0.8
HLA-F-225ENST00000482257 TSPEAR-AS2P59090 65 aa10.05□□□□□ -0.8
HLA-F-225ENST00000482257 C9orf163Q8N9P6 203 aa10.05□□□□□ -0.8
HLA-F-225ENST00000482257 ZNF625Q96I27 306 aaPredicted RBP10.05□□□□□ -0.8
HLA-F-225ENST00000482257 APOBP04114 4563 aaKnown RBP10.05□□□□□ -0.8
HLA-F-225ENST00000482257 IGKV2D-26A0A0A0MRZ7 120 aa10.04□□□□□ -0.8
HLA-F-225ENST00000482257 C10orf25Q5T742 122 aa10.04□□□□□ -0.8
HLA-F-225ENST00000482257 C6orf48Q9UBA6 75 aa10.04□□□□□ -0.8
HLA-F-225ENST00000482257 PAM16Q9Y3D7 125 aa10.04□□□□□ -0.8
HLA-F-225ENST00000482257 ZNF815PA8K554 130 aa10.03□□□□□ -0.8
HLA-F-225ENST00000482257 SPATA45Q537H7 98 aa10.03□□□□□ -0.8
HLA-F-225ENST00000482257 KRTAP10-2P60368 255 aa10.02□□□□□ -0.81
HLA-F-225ENST00000482257 LOC107984640A0A0U1RRK4 108 aa10.01□□□□□ -0.81
HLA-F-225ENST00000482257 COX17Q14061 63 aa10.01□□□□□ -0.81
HLA-F-225ENST00000482257 MEIG1Q5JSS6 88 aa10.01□□□□□ -0.81
HLA-F-225ENST00000482257 ERG28Q9UKR5 140 aa10.01□□□□□ -0.81
HLA-F-225ENST00000482257 ABCA13Q86UQ4 5058 aa10.01□□□□□ -0.81
HLA-F-225ENST00000482257 TLX1NBP0CAT3 122 aa10□□□□□ -0.81
HLA-F-225ENST00000482257 GCSHP23434 173 aa10□□□□□ -0.81
HLA-F-225ENST00000482257 CIRBPQ14011 172 aaKnown RBP10□□□□□ -0.81
HLA-F-225ENST00000482257 NDUFC2-KCTD14E9PQ53 114 aa9.99□□□□□ -0.81
HLA-F-225ENST00000482257 PCP2Q8IVA1 136 aa9.99□□□□□ -0.81
HLA-F-225ENST00000482257 COX8AP10176 69 aa9.98□□□□□ -0.81
HLA-F-225ENST00000482257 C9orf116Q5BN46 136 aaPredicted RBP9.98□□□□□ -0.81
HLA-F-225ENST00000482257 SCGB1D4Q6XE38 83 aa9.98□□□□□ -0.81
HLA-F-225ENST00000482257 A0A0J9YXY3 114 aa9.97□□□□□ -0.81
HLA-F-225ENST00000482257 PFN2P35080 140 aa9.97□□□□□ -0.81
HLA-F-225ENST00000482257 FUSP35637 526 aaKnown RBP eCLIP9.97□□□□□ -0.81
HLA-F-225ENST00000482257 LINC00158P58513 81 aa9.97□□□□□ -0.81
HLA-F-225ENST00000482257 RPL18AQ02543 176 aaKnown RBP9.97□□□□□ -0.81
HLA-F-225ENST00000482257 KRTAP17-1Q9BYP8 105 aa9.97□□□□□ -0.81
HLA-F-225ENST00000482257 TTTY13Q9BZ97 58 aa9.97□□□□□ -0.81
HLA-F-225ENST00000482257 C16orf90A8MZG2 172 aa9.96□□□□□ -0.82
HLA-F-225ENST00000482257 DLEU1O43261 78 aa9.96□□□□□ -0.82
HLA-F-225ENST00000482257 SDIM1Q6ZPB5 146 aa9.96□□□□□ -0.82
HLA-F-225ENST00000482257 BOD1L2Q8IYS8 172 aa9.96□□□□□ -0.82
HLA-F-225ENST00000482257 LINC00474Q9P2X8 69 aa9.96□□□□□ -0.82
HLA-F-225ENST00000482257 TIMM17BO60830 172 aa9.95□□□□□ -0.82
HLA-F-225ENST00000482257 SMIM13P0DJ93 91 aa9.95□□□□□ -0.82
HLA-F-225ENST00000482257 LINC01620Q4KN68 170 aa9.95□□□□□ -0.82
HLA-F-225ENST00000482257 SLC25A34Q6PIV7 304 aa9.95□□□□□ -0.82
HLA-F-225ENST00000482257 TMEM238C9JI98 176 aa9.94□□□□□ -0.82
HLA-F-225ENST00000482257 GAGE2BQ13066 116 aa9.94□□□□□ -0.82
HLA-F-225ENST00000482257 C14orf144Q96I85 54 aa9.94□□□□□ -0.82
HLA-F-225ENST00000482257 A0A0U1RRA0 63 aa9.93□□□□□ -0.82
HLA-F-225ENST00000482257 PTTG1IPP53801 180 aa9.93□□□□□ -0.82
HLA-F-225ENST00000482257 GAGE2EQ4V326 116 aa9.93□□□□□ -0.82
HLA-F-225ENST00000482257 Q6ZRP5 223 aa9.93□□□□□ -0.82
HLA-F-225ENST00000482257 GAGE2DQ9UEU5 116 aa9.93□□□□□ -0.82
HLA-F-225ENST00000482257 C12orf57Q99622 126 aa9.92□□□□□ -0.82
HLA-F-225ENST00000482257 A0A096LNI7 61 aa9.91□□□□□ -0.82
HLA-F-225ENST00000482257 IGKV2-24A0A0C4DH68 120 aa9.91□□□□□ -0.82
HLA-F-225ENST00000482257 MIR7-3HGQ8N6C7 128 aa9.91□□□□□ -0.82
HLA-F-225ENST00000482257 COPS9Q8WXC6 57 aa9.91□□□□□ -0.82
HLA-F-225ENST00000482257 DPH3Q96FX2 82 aa9.91□□□□□ -0.82
HLA-F-225ENST00000482257 KRTAP10-1P60331 282 aa9.9□□□□□ -0.82
HLA-F-225ENST00000482257 Q6ZVH6 145 aa9.9□□□□□ -0.82
HLA-F-225ENST00000482257 MIEN1Q9BRT3 115 aa9.89□□□□□ -0.83
HLA-F-225ENST00000482257 SND1-IT1Q9HBX3 110 aa9.89□□□□□ -0.83
HLA-F-225ENST00000482257 UQCR10Q9UDW1 63 aa9.89□□□□□ -0.83
HLA-F-225ENST00000482257 LINC00518Q8N0U6 118 aa9.88□□□□□ -0.83
HLA-F-225ENST00000482257 LITAFQ99732 161 aa9.88□□□□□ -0.83
HLA-F-225ENST00000482257 SPANXDQ9BXN6 97 aa9.88□□□□□ -0.83
HLA-F-225ENST00000482257 KRTAP4-5Q9BYR2 181 aa9.88□□□□□ -0.83
HLA-F-225ENST00000482257 XAGE1AQ9HD64 81 aa9.88□□□□□ -0.83
HLA-F-225ENST00000482257 SPANXCQ9NY87 97 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms