RNA–Protein interactions for RNA: ENST00000481655.2

CTCFL-210, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 1,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-210ENST00000481655 SPATA45Q537H7 98 aa9.79□□□□□ -0.84
CTCFL-210ENST00000481655 NTN5Q8WTR8 489 aaPredicted RBP9.79□□□□□ -0.84
CTCFL-210ENST00000481655 NDUFA12Q9UI09 145 aa9.79□□□□□ -0.84
CTCFL-210ENST00000481655 FRAS1Q86XX4 4008 aa9.78□□□□□ -0.84
CTCFL-210ENST00000481655 SYCNQ0VAF6 134 aa9.78□□□□□ -0.84
CTCFL-210ENST00000481655 LINC00526Q96FQ7 95 aa9.78□□□□□ -0.84
CTCFL-210ENST00000481655 IGKV2D-26A0A0A0MRZ7 120 aa9.77□□□□□ -0.84
CTCFL-210ENST00000481655 HERV-K104P63124 156 aa9.77□□□□□ -0.84
CTCFL-210ENST00000481655 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.77□□□□□ -0.85
CTCFL-210ENST00000481655 TSPEAR-AS2P59090 65 aa9.77□□□□□ -0.85
CTCFL-210ENST00000481655 CNBPP62633 177 aaKnown RBP9.77□□□□□ -0.85
CTCFL-210ENST00000481655 C2orf82Q6UX34 121 aa9.77□□□□□ -0.85
CTCFL-210ENST00000481655 CARD19Q96LW7 228 aa9.77□□□□□ -0.85
CTCFL-210ENST00000481655 FAT2Q9NYQ8 4349 aa9.76□□□□□ -0.85
CTCFL-210ENST00000481655 TRBV30A0A0K0K1B3 111 aa9.76□□□□□ -0.85
CTCFL-210ENST00000481655 ZNF815PA8K554 130 aa9.76□□□□□ -0.85
CTCFL-210ENST00000481655 CDPF1Q6NVV7 123 aa9.76□□□□□ -0.85
CTCFL-210ENST00000481655 LINC00587B1AMM8 73 aa9.75□□□□□ -0.85
CTCFL-210ENST00000481655 ZNF625Q96I27 306 aaPredicted RBP9.75□□□□□ -0.85
CTCFL-210ENST00000481655 RNF151Q2KHN1 245 aa9.74□□□□□ -0.85
CTCFL-210ENST00000481655 UNQ6190/PRO20217Q6UXQ8 127 aa9.74□□□□□ -0.85
CTCFL-210ENST00000481655 C12orf57Q99622 126 aa9.74□□□□□ -0.85
CTCFL-210ENST00000481655 PKIGQ9Y2B9 76 aa9.74□□□□□ -0.85
CTCFL-210ENST00000481655 COX8AP10176 69 aa9.73□□□□□ -0.85
CTCFL-210ENST00000481655 Q6ZRU5 148 aa9.73□□□□□ -0.85
CTCFL-210ENST00000481655 PCP2Q8IVA1 136 aa9.73□□□□□ -0.85
CTCFL-210ENST00000481655 MEIG1Q5JSS6 88 aa9.72□□□□□ -0.85
CTCFL-210ENST00000481655 SCGB1D4Q6XE38 83 aa9.72□□□□□ -0.85
CTCFL-210ENST00000481655 IGLV5-52A0A0A0MRZ9 124 aa9.72□□□□□ -0.85
CTCFL-210ENST00000481655 SLPIP03973 132 aa9.72□□□□□ -0.85
CTCFL-210ENST00000481655 CIRBPQ14011 172 aaKnown RBP9.72□□□□□ -0.85
CTCFL-210ENST00000481655 C10orf25Q5T742 122 aa9.72□□□□□ -0.85
CTCFL-210ENST00000481655 PGPEP1Q9NXJ5 209 aa9.72□□□□□ -0.85
CTCFL-210ENST00000481655 DLEU1O43261 78 aa9.71□□□□□ -0.86
CTCFL-210ENST00000481655 COX17Q14061 63 aa9.71□□□□□ -0.86
CTCFL-210ENST00000481655 SLC25A34Q6PIV7 304 aa9.71□□□□□ -0.86
CTCFL-210ENST00000481655 C14orf144Q96I85 54 aa9.71□□□□□ -0.86
CTCFL-210ENST00000481655 TTTY13Q9BZ97 58 aa9.71□□□□□ -0.86
CTCFL-210ENST00000481655 C6orf48Q9UBA6 75 aa9.71□□□□□ -0.86
CTCFL-210ENST00000481655 ERG28Q9UKR5 140 aa9.71□□□□□ -0.86
CTCFL-210ENST00000481655 DNAH11Q96DT5 4516 aa9.71□□□□□ -0.86
CTCFL-210ENST00000481655 BOD1L2Q8IYS8 172 aa9.7□□□□□ -0.86
CTCFL-210ENST00000481655 A0A0J9YXY3 114 aa9.69□□□□□ -0.86
CTCFL-210ENST00000481655 LINC00518Q8N0U6 118 aa9.69□□□□□ -0.86
CTCFL-210ENST00000481655 C9orf163Q8N9P6 203 aa9.69□□□□□ -0.86
CTCFL-210ENST00000481655 LINC00158P58513 81 aa9.68□□□□□ -0.86
CTCFL-210ENST00000481655 LOC107984640A0A0U1RRK4 108 aa9.67□□□□□ -0.86
CTCFL-210ENST00000481655 TMEM238C9JI98 176 aa9.67□□□□□ -0.86
CTCFL-210ENST00000481655 NDUFC2-KCTD14E9PQ53 114 aa9.67□□□□□ -0.86
CTCFL-210ENST00000481655 PFN2P35080 140 aa9.67□□□□□ -0.86
CTCFL-210ENST00000481655 HECTD4Q9Y4D8 3996 aa9.67□□□□□ -0.86
CTCFL-210ENST00000481655 TIMM17BO60830 172 aa9.66□□□□□ -0.86
CTCFL-210ENST00000481655 C9orf116Q5BN46 136 aaPredicted RBP9.66□□□□□ -0.86
CTCFL-210ENST00000481655 UQCR10Q9UDW1 63 aa9.66□□□□□ -0.86
CTCFL-210ENST00000481655 TLX1NBP0CAT3 122 aa9.66□□□□□ -0.86
CTCFL-210ENST00000481655 SMIM13P0DJ93 91 aa9.66□□□□□ -0.86
CTCFL-210ENST00000481655 GCSHP23434 173 aa9.66□□□□□ -0.86
CTCFL-210ENST00000481655 RPL18AQ02543 176 aaKnown RBP9.66□□□□□ -0.86
CTCFL-210ENST00000481655 TSTD3H0UI37 97 aa9.65□□□□□ -0.86
CTCFL-210ENST00000481655 PKD1P98161 4303 aa9.64□□□□□ -0.87
CTCFL-210ENST00000481655 A0A0U1RRA0 63 aa9.64□□□□□ -0.87
CTCFL-210ENST00000481655 KRTAP10-2P60368 255 aa9.64□□□□□ -0.87
CTCFL-210ENST00000481655 COPS9Q8WXC6 57 aa9.63□□□□□ -0.87
CTCFL-210ENST00000481655 DNAH5Q8TE73 4624 aa9.63□□□□□ -0.87
CTCFL-210ENST00000481655 GAGE2BQ13066 116 aa9.62□□□□□ -0.87
CTCFL-210ENST00000481655 Q6ZVH6 145 aa9.62□□□□□ -0.87
CTCFL-210ENST00000481655 MIR7-3HGQ8N6C7 128 aa9.62□□□□□ -0.87
CTCFL-210ENST00000481655 MIEN1Q9BRT3 115 aa9.62□□□□□ -0.87
CTCFL-210ENST00000481655 PRO1933Q9H354 126 aa9.62□□□□□ -0.87
CTCFL-210ENST00000481655 HIGD1BQ9P298 99 aa9.62□□□□□ -0.87
CTCFL-210ENST00000481655 LINC00474Q9P2X8 69 aa9.62□□□□□ -0.87
CTCFL-210ENST00000481655 FUSP35637 526 aaKnown RBP eCLIP9.61□□□□□ -0.87
CTCFL-210ENST00000481655 GAGE2EQ4V326 116 aa9.61□□□□□ -0.87
CTCFL-210ENST00000481655 GAGE2DQ9UEU5 116 aa9.61□□□□□ -0.87
CTCFL-210ENST00000481655 A0A1B0GVY2 172 aa9.61□□□□□ -0.87
CTCFL-210ENST00000481655 C16orf90A8MZG2 172 aa9.61□□□□□ -0.87
CTCFL-210ENST00000481655 SRSF9Q13242 221 aaKnown RBP eCLIP9.61□□□□□ -0.87
CTCFL-210ENST00000481655 Q6ZRP5 223 aa9.61□□□□□ -0.87
CTCFL-210ENST00000481655 TP73-AS1Q9UF72 201 aa9.61□□□□□ -0.87
CTCFL-210ENST00000481655 LINC01620Q4KN68 170 aa9.6□□□□□ -0.87
CTCFL-210ENST00000481655 SDIM1Q6ZPB5 146 aa9.6□□□□□ -0.87
CTCFL-210ENST00000481655 LITAFQ99732 161 aa9.6□□□□□ -0.87
CTCFL-210ENST00000481655 SPANXDQ9BXN6 97 aa9.6□□□□□ -0.87
CTCFL-210ENST00000481655 SPANXB1Q9NS25 103 aaPredicted RBP9.6□□□□□ -0.87
CTCFL-210ENST00000481655 SPANXCQ9NY87 97 aa9.6□□□□□ -0.87
CTCFL-210ENST00000481655 HNRNPA3P51991 378 aaKnown RBP9.59□□□□□ -0.87
CTCFL-210ENST00000481655 PTTG1IPP53801 180 aa9.59□□□□□ -0.87
CTCFL-210ENST00000481655 ADAMTSL4-AS1Q5T5F5 129 aa9.59□□□□□ -0.87
CTCFL-210ENST00000481655 DAND5Q8N907 189 aa9.59□□□□□ -0.87
CTCFL-210ENST00000481655 SND1-IT1Q9HBX3 110 aa9.59□□□□□ -0.87
CTCFL-210ENST00000481655 IGKV2-24A0A0C4DH68 120 aa9.58□□□□□ -0.88
CTCFL-210ENST00000481655 IFITM1P13164 125 aa9.58□□□□□ -0.88
CTCFL-210ENST00000481655 HIST1H4GQ99525 98 aa9.58□□□□□ -0.88
CTCFL-210ENST00000481655 A0A096LNI7 61 aa9.57□□□□□ -0.88
CTCFL-210ENST00000481655 C2orf91Q6ZV80 131 aa9.57□□□□□ -0.88
CTCFL-210ENST00000481655 XAGE1AQ9HD64 81 aa9.57□□□□□ -0.88
CTCFL-210ENST00000481655 DPH3Q96FX2 82 aa9.56□□□□□ -0.88
CTCFL-210ENST00000481655 LINC00308Q8TCZ7 52 aa9.56□□□□□ -0.88
CTCFL-210ENST00000481655 NPC2P61916 151 aa9.55□□□□□ -0.88
CTCFL-210ENST00000481655 RPL24P83731 157 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms