RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 ZC2HC1BQ5TFG8 222 aa12.75□□□□□ -0.37
VPS36-204ENST00000480923 LINC00173Q6ZV60 143 aa12.75□□□□□ -0.37
VPS36-204ENST00000480923 AMELXQ99217 191 aa12.75□□□□□ -0.37
VPS36-204ENST00000480923 HIST1H2BLQ99880 126 aa12.75□□□□□ -0.37
VPS36-204ENST00000480923 PMVKQ15126 192 aa12.74□□□□□ -0.37
VPS36-204ENST00000480923 MAP1LC3CQ9BXW4 147 aa12.74□□□□□ -0.37
VPS36-204ENST00000480923 LOC107984640A0A0U1RRK4 108 aa12.73□□□□□ -0.37
VPS36-204ENST00000480923 UBE2D1P51668 147 aa12.73□□□□□ -0.37
VPS36-204ENST00000480923 GAGE2BQ13066 116 aa12.73□□□□□ -0.37
VPS36-204ENST00000480923 C7orf33Q8WU49 177 aa12.73□□□□□ -0.37
VPS36-204ENST00000480923 CST9LQ9H4G1 147 aa12.72□□□□□ -0.37
VPS36-204ENST00000480923 A0A087WZ39 114 aa12.71□□□□□ -0.37
VPS36-204ENST00000480923 TRAV12-1A0A0B4J245 112 aa12.7□□□□□ -0.38
VPS36-204ENST00000480923 J3QL48 77 aa12.7□□□□□ -0.38
VPS36-204ENST00000480923 PTTG1IPP53801 180 aa12.7□□□□□ -0.38
VPS36-204ENST00000480923 A0A0J9YXV3 536 aa12.69□□□□□ -0.38
VPS36-204ENST00000480923 F8WDY8 70 aa12.69□□□□□ -0.38
VPS36-204ENST00000480923 NDUFA1O15239 70 aa12.69□□□□□ -0.38
VPS36-204ENST00000480923 RPL18AQ02543 176 aaKnown RBP12.69□□□□□ -0.38
VPS36-204ENST00000480923 H0Y8G0 127 aa12.68□□□□□ -0.38
VPS36-204ENST00000480923 KRTDAPP60985 99 aa12.68□□□□□ -0.38
VPS36-204ENST00000480923 RNF151Q2KHN1 245 aa12.68□□□□□ -0.38
VPS36-204ENST00000480923 SYS1-DBNDD2H3BUS1 97 aa12.67□□□□□ -0.38
VPS36-204ENST00000480923 C3orf79P0CE67 100 aa12.67□□□□□ -0.38
VPS36-204ENST00000480923 HNRNPA3P51991 378 aaKnown RBP12.67□□□□□ -0.38
VPS36-204ENST00000480923 MRPL35Q9NZE8 188 aaKnown RBP12.67□□□□□ -0.38
VPS36-204ENST00000480923 HERC1Q15751 4861 aa12.66□□□□□ -0.38
VPS36-204ENST00000480923 KRTAP29-1A8MX34 341 aaPredicted RBP12.66□□□□□ -0.38
VPS36-204ENST00000480923 SEC11AP67812 179 aa12.66□□□□□ -0.38
VPS36-204ENST00000480923 PET117Q6UWS5 81 aa12.66□□□□□ -0.38
VPS36-204ENST00000480923 CHTOPQ9Y3Y2 248 aaKnown RBP12.66□□□□□ -0.38
VPS36-204ENST00000480923 C10orf25Q5T742 122 aa12.65□□□□□ -0.38
VPS36-204ENST00000480923 UNQ6190/PRO20217Q6UXQ8 127 aa12.65□□□□□ -0.38
VPS36-204ENST00000480923 LINC01561Q8N1V8 128 aa12.65□□□□□ -0.38
VPS36-204ENST00000480923 KIAA0087Q14695 138 aa12.64□□□□□ -0.39
VPS36-204ENST00000480923 FAM19A3Q7Z5A8 133 aa12.64□□□□□ -0.39
VPS36-204ENST00000480923 DMBT1Q9UGM3 2413 aaPredicted RBP12.63□□□□□ -0.39
VPS36-204ENST00000480923 TINCRA0A1B0GVN0 87 aa12.63□□□□□ -0.39
VPS36-204ENST00000480923 F8VRH5 84 aa12.63□□□□□ -0.39
VPS36-204ENST00000480923 HERVK_113P63121 156 aa12.63□□□□□ -0.39
VPS36-204ENST00000480923 ODF1Q14990 250 aa12.63□□□□□ -0.39
VPS36-204ENST00000480923 GEMIN7Q9H840 131 aaKnown RBP12.63□□□□□ -0.39
VPS36-204ENST00000480923 C6orf48Q9UBA6 75 aa12.63□□□□□ -0.39
VPS36-204ENST00000480923 C20orf202A1L168 122 aa12.62□□□□□ -0.39
VPS36-204ENST00000480923 PRSS2P07478 247 aa12.61□□□□□ -0.39
VPS36-204ENST00000480923 IGLC3P0DOY3 106 aa12.61□□□□□ -0.39
VPS36-204ENST00000480923 C2orf82Q6UX34 121 aa12.61□□□□□ -0.39
VPS36-204ENST00000480923 TOMM7Q9P0U1 55 aa12.61□□□□□ -0.39
VPS36-204ENST00000480923 CDKN2A-AS1Q9UH64 79 aa12.61□□□□□ -0.39
VPS36-204ENST00000480923 A0A1W2PNN7 141 aa12.6□□□□□ -0.39
VPS36-204ENST00000480923 OXTP01178 125 aa12.6□□□□□ -0.39
VPS36-204ENST00000480923 LINC01545Q5VT33 79 aa12.6□□□□□ -0.39
VPS36-204ENST00000480923 PLNP26678 52 aa12.59□□□□□ -0.39
VPS36-204ENST00000480923 AKR1D1P51857 326 aa12.59□□□□□ -0.39
VPS36-204ENST00000480923 PRR3P79522 188 aaKnown RBP12.59□□□□□ -0.39
VPS36-204ENST00000480923 C9orf116Q5BN46 136 aaPredicted RBP12.59□□□□□ -0.39
VPS36-204ENST00000480923 TRBV30A0A0K0K1B3 111 aa12.58□□□□□ -0.4
VPS36-204ENST00000480923 DPM2O94777 84 aa12.58□□□□□ -0.4
VPS36-204ENST00000480923 TLX1NBP0CAT3 122 aa12.58□□□□□ -0.4
VPS36-204ENST00000480923 C6orf226Q5I0X4 101 aa12.58□□□□□ -0.4
VPS36-204ENST00000480923 Q6ZRP5 223 aa12.58□□□□□ -0.4
VPS36-204ENST00000480923 LINC00469Q8N7U9 141 aa12.58□□□□□ -0.4
VPS36-204ENST00000480923 PMCHL2Q9BQD1 86 aa12.58□□□□□ -0.4
VPS36-204ENST00000480923 IGKCP01834 107 aa12.57□□□□□ -0.4
VPS36-204ENST00000480923 CKS1BP61024 79 aa12.57□□□□□ -0.4
VPS36-204ENST00000480923 GAGE2EQ4V326 116 aa12.57□□□□□ -0.4
VPS36-204ENST00000480923 GAGE2DQ9UEU5 116 aa12.57□□□□□ -0.4
VPS36-204ENST00000480923 LRP1Q07954 4544 aaKnown RBP12.57□□□□□ -0.4
VPS36-204ENST00000480923 C11orf86A6NJI1 115 aa12.56□□□□□ -0.4
VPS36-204ENST00000480923 Q8IZM0 81 aa12.56□□□□□ -0.4
VPS36-204ENST00000480923 PKHD1L1Q86WI1 4243 aa12.56□□□□□ -0.4
VPS36-204ENST00000480923 IGLV5-45A0A087WSX0 123 aa12.55□□□□□ -0.4
VPS36-204ENST00000480923 H3BRM9 83 aa12.55□□□□□ -0.4
VPS36-204ENST00000480923 SCGB1D1O95968 90 aa12.55□□□□□ -0.4
VPS36-204ENST00000480923 TMEM170BQ5T4T1 132 aa12.55□□□□□ -0.4
VPS36-204ENST00000480923 FAT3Q8TDW7 4589 aa12.55□□□□□ -0.4
VPS36-204ENST00000480923 ZNF22P17026 224 aaPredicted RBP12.54□□□□□ -0.4
VPS36-204ENST00000480923 NDUFC2-KCTD14E9PQ53 114 aa12.53□□□□□ -0.4
VPS36-204ENST00000480923 PHF5AQ7RTV0 110 aaKnown RBP12.52□□□□□ -0.41
VPS36-204ENST00000480923 FAM168BA1KXE4 195 aa12.51□□□□□ -0.41
VPS36-204ENST00000480923 SMIM1B2RUZ4 78 aa12.51□□□□□ -0.41
VPS36-204ENST00000480923 JOSD1Q15040 202 aaPredicted RBP12.51□□□□□ -0.41
VPS36-204ENST00000480923 FAM19A5Q7Z5A7 132 aaPredicted RBP12.5□□□□□ -0.41
VPS36-204ENST00000480923 CXCL5P42830 114 aa12.49□□□□□ -0.41
VPS36-204ENST00000480923 TMEM223A0PJW6 202 aa12.48□□□□□ -0.41
VPS36-204ENST00000480923 SPINK8P0C7L1 97 aa12.48□□□□□ -0.41
VPS36-204ENST00000480923 HERVK_113P61574 105 aa12.48□□□□□ -0.41
VPS36-204ENST00000480923 COX7B2Q8TF08 81 aa12.48□□□□□ -0.41
VPS36-204ENST00000480923 LOC105371267A0A1B0GV96 52 aa12.47□□□□□ -0.41
VPS36-204ENST00000480923 ATOH7Q8N100 152 aa12.47□□□□□ -0.41
VPS36-204ENST00000480923 C9orf129Q5T035 196 aaKnown RBP12.46□□□□□ -0.41
VPS36-204ENST00000480923 PSORS1C2Q9UIG4 136 aa12.46□□□□□ -0.41
VPS36-204ENST00000480923 SPINK6Q6UWN8 80 aa12.45□□□□□ -0.42
VPS36-204ENST00000480923 HSBP1L1C9JCN9 74 aa12.44□□□□□ -0.42
VPS36-204ENST00000480923 M0QXV9 152 aa12.44□□□□□ -0.42
VPS36-204ENST00000480923 PYY3Q5JQD4 70 aa12.44□□□□□ -0.42
VPS36-204ENST00000480923 IGLV5-39A0A0G2JS06 123 aa12.43□□□□□ -0.42
VPS36-204ENST00000480923 C1orf137Q5JT78 98 aa12.43□□□□□ -0.42
VPS36-204ENST00000480923 KRTAP7-1Q8IUC3 87 aa12.43□□□□□ -0.42
VPS36-204ENST00000480923 XAGE1AQ9HD64 81 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms