RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 PMCHL2Q9BQD1 86 aa7.86□□□□□ -1.15
TRA2B-212ENST00000480461 F8VRH5 84 aa7.85□□□□□ -1.15
TRA2B-212ENST00000480461 C2orf82Q6UX34 121 aa7.85□□□□□ -1.15
TRA2B-212ENST00000480461 C2orf48Q96LS8 159 aa7.85□□□□□ -1.15
TRA2B-212ENST00000480461 SYS1-DBNDD2H3BUS1 97 aa7.84□□□□□ -1.15
TRA2B-212ENST00000480461 PANO1I0J062 215 aa7.84□□□□□ -1.15
TRA2B-212ENST00000480461 C3orf79P0CE67 100 aa7.84□□□□□ -1.15
TRA2B-212ENST00000480461 XGP55808 180 aa7.84□□□□□ -1.15
TRA2B-212ENST00000480461 SNRPEP62304 92 aaKnown RBP7.84□□□□□ -1.15
TRA2B-212ENST00000480461 SYCNQ0VAF6 134 aa7.84□□□□□ -1.15
TRA2B-212ENST00000480461 PACRGQ96M98 296 aaPredicted RBP7.84□□□□□ -1.15
TRA2B-212ENST00000480461 MAP1LC3CQ9BXW4 147 aa7.84□□□□□ -1.15
TRA2B-212ENST00000480461 IGLV5-39A0A0G2JS06 123 aa7.83□□□□□ -1.16
TRA2B-212ENST00000480461 C5orf52A6NGY3 159 aa7.83□□□□□ -1.16
TRA2B-212ENST00000480461 TMEM170BQ5T4T1 132 aa7.83□□□□□ -1.16
TRA2B-212ENST00000480461 CAMK2N2Q96S95 79 aa7.83□□□□□ -1.16
TRA2B-212ENST00000480461 HIST1H2BLQ99880 126 aa7.83□□□□□ -1.16
TRA2B-212ENST00000480461 TOMM7Q9P0U1 55 aa7.83□□□□□ -1.16
TRA2B-212ENST00000480461 TMEM223A0PJW6 202 aa7.82□□□□□ -1.16
TRA2B-212ENST00000480461 Q6ZSA8 131 aa7.82□□□□□ -1.16
TRA2B-212ENST00000480461 Q8IZM0 81 aa7.82□□□□□ -1.16
TRA2B-212ENST00000480461 CARD19Q96LW7 228 aa7.82□□□□□ -1.16
TRA2B-212ENST00000480461 C6orf48Q9UBA6 75 aa7.82□□□□□ -1.16
TRA2B-212ENST00000480461 DNAH8Q96JB1 4490 aa7.81□□□□□ -1.16
TRA2B-212ENST00000480461 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.81□□□□□ -1.16
TRA2B-212ENST00000480461 HAMPP81172 84 aa7.81□□□□□ -1.16
TRA2B-212ENST00000480461 C9orf116Q5BN46 136 aaPredicted RBP7.81□□□□□ -1.16
TRA2B-212ENST00000480461 C6orf226Q5I0X4 101 aa7.81□□□□□ -1.16
TRA2B-212ENST00000480461 LINC01545Q5VT33 79 aa7.81□□□□□ -1.16
TRA2B-212ENST00000480461 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.81□□□□□ -1.16
TRA2B-212ENST00000480461 HMCN2Q8NDA2 5059 aa7.81□□□□□ -1.16
TRA2B-212ENST00000480461 H3BRM9 83 aa7.8□□□□□ -1.16
TRA2B-212ENST00000480461 S100A6P06703 90 aa7.8□□□□□ -1.16
TRA2B-212ENST00000480461 CHTF8P0CG12 524 aa7.8□□□□□ -1.16
TRA2B-212ENST00000480461 KRTDAPP60985 99 aa7.8□□□□□ -1.16
TRA2B-212ENST00000480461 PET117Q6UWS5 81 aa7.8□□□□□ -1.16
TRA2B-212ENST00000480461 COX7B2Q8TF08 81 aa7.8□□□□□ -1.16
TRA2B-212ENST00000480461 F8WDY8 70 aa7.79□□□□□ -1.16
TRA2B-212ENST00000480461 J3QL48 77 aa7.79□□□□□ -1.16
TRA2B-212ENST00000480461 NDUFA1O15239 70 aa7.79□□□□□ -1.16
TRA2B-212ENST00000480461 DPM2O94777 84 aa7.79□□□□□ -1.16
TRA2B-212ENST00000480461 RNF151Q2KHN1 245 aa7.79□□□□□ -1.16
TRA2B-212ENST00000480461 A0A096LNI7 61 aa7.78□□□□□ -1.16
TRA2B-212ENST00000480461 IGKCP01834 107 aa7.78□□□□□ -1.16
TRA2B-212ENST00000480461 PRSS2P07478 247 aa7.78□□□□□ -1.16
TRA2B-212ENST00000480461 PLNP26678 52 aa7.78□□□□□ -1.16
TRA2B-212ENST00000480461 CKS1BP61024 79 aa7.77□□□□□ -1.17
TRA2B-212ENST00000480461 CIRBPQ14011 172 aaKnown RBP7.77□□□□□ -1.17
TRA2B-212ENST00000480461 SMR3BP02814 79 aaPredicted RBP7.76□□□□□ -1.17
TRA2B-212ENST00000480461 S100A2P29034 98 aa7.76□□□□□ -1.17
TRA2B-212ENST00000480461 TSPEAR-AS2P59090 65 aa7.76□□□□□ -1.17
TRA2B-212ENST00000480461 Q6ZRP5 223 aa7.76□□□□□ -1.17
TRA2B-212ENST00000480461 STPG4Q8N801 248 aa7.76□□□□□ -1.17
TRA2B-212ENST00000480461 CIRBP-AS1Q8TBR5 109 aa7.76□□□□□ -1.17
TRA2B-212ENST00000480461 ZNF625Q96I27 306 aaPredicted RBP7.76□□□□□ -1.17
TRA2B-212ENST00000480461 TRBV30A0A0K0K1B3 111 aa7.75□□□□□ -1.17
TRA2B-212ENST00000480461 TLX1NBP0CAT3 122 aa7.75□□□□□ -1.17
TRA2B-212ENST00000480461 SCXQ7RTU7 201 aa7.75□□□□□ -1.17
TRA2B-212ENST00000480461 IGKV2-24A0A0C4DH68 120 aa7.74□□□□□ -1.17
TRA2B-212ENST00000480461 LOC107984640A0A0U1RRK4 108 aa7.74□□□□□ -1.17
TRA2B-212ENST00000480461 PTTG1IPP53801 180 aa7.74□□□□□ -1.17
TRA2B-212ENST00000480461 GAGE2BQ13066 116 aa7.74□□□□□ -1.17
TRA2B-212ENST00000480461 SPACA4Q8TDM5 124 aa7.74□□□□□ -1.17
TRA2B-212ENST00000480461 TMA7Q9Y2S6 64 aaKnown RBP7.74□□□□□ -1.17
TRA2B-212ENST00000480461 A0A087WYN8 130 aa7.73□□□□□ -1.17
TRA2B-212ENST00000480461 LEPROTO15243 131 aa7.73□□□□□ -1.17
TRA2B-212ENST00000480461 ATOH7Q8N100 152 aa7.73□□□□□ -1.17
TRA2B-212ENST00000480461 A0A1W2PNN7 141 aa7.72□□□□□ -1.17
TRA2B-212ENST00000480461 FAM229AH3BQW9 127 aa7.72□□□□□ -1.17
TRA2B-212ENST00000480461 CXCL5P42830 114 aa7.72□□□□□ -1.17
TRA2B-212ENST00000480461 MAJINQ3KP22 176 aa7.72□□□□□ -1.17
TRA2B-212ENST00000480461 LCE2AQ5TA79 106 aaPredicted RBP7.72□□□□□ -1.17
TRA2B-212ENST00000480461 KRTAP7-1Q8IUC3 87 aa7.72□□□□□ -1.17
TRA2B-212ENST00000480461 IGKV2D-26A0A0A0MRZ7 120 aa7.71□□□□□ -1.18
TRA2B-212ENST00000480461 E9PLD3 99 aa7.71□□□□□ -1.18
TRA2B-212ENST00000480461 NDUFC2-KCTD14E9PQ53 114 aa7.71□□□□□ -1.18
TRA2B-212ENST00000480461 RPL18AQ02543 176 aaKnown RBP7.71□□□□□ -1.18
TRA2B-212ENST00000480461 GAGE2EQ4V326 116 aa7.71□□□□□ -1.18
TRA2B-212ENST00000480461 C9orf129Q5T035 196 aaKnown RBP7.71□□□□□ -1.18
TRA2B-212ENST00000480461 DPH3Q96FX2 82 aa7.71□□□□□ -1.18
TRA2B-212ENST00000480461 GAGE2DQ9UEU5 116 aa7.71□□□□□ -1.18
TRA2B-212ENST00000480461 FAM168BA1KXE4 195 aa7.7□□□□□ -1.18
TRA2B-212ENST00000480461 KRTAP29-1A8MX34 341 aaPredicted RBP7.7□□□□□ -1.18
TRA2B-212ENST00000480461 J3QQQ9 107 aa7.7□□□□□ -1.18
TRA2B-212ENST00000480461 ANKRD39Q53RE8 183 aa7.7□□□□□ -1.18
TRA2B-212ENST00000480461 SERTAD4-AS1Q5TG53 156 aa7.7□□□□□ -1.18
TRA2B-212ENST00000480461 PLAC8Q9NZF1 115 aa7.7□□□□□ -1.18
TRA2B-212ENST00000480461 PFN2P35080 140 aa7.69□□□□□ -1.18
TRA2B-212ENST00000480461 PLEKHB2Q96CS7 222 aa7.69□□□□□ -1.18
TRA2B-212ENST00000480461 TTTY13Q9BZ97 58 aa7.69□□□□□ -1.18
TRA2B-212ENST00000480461 XAGE1AQ9HD64 81 aa7.69□□□□□ -1.18
TRA2B-212ENST00000480461 NDUFA12Q9UI09 145 aa7.69□□□□□ -1.18
TRA2B-212ENST00000480461 C20orf202A1L168 122 aa7.68□□□□□ -1.18
TRA2B-212ENST00000480461 ERG28Q9UKR5 140 aa7.68□□□□□ -1.18
TRA2B-212ENST00000480461 HERVK_113P61574 105 aa7.67□□□□□ -1.18
TRA2B-212ENST00000480461 LINC00474Q9P2X8 69 aa7.67□□□□□ -1.18
TRA2B-212ENST00000480461 A0A0U1RRA0 63 aa7.66□□□□□ -1.18
TRA2B-212ENST00000480461 SMIM13P0DJ93 91 aa7.66□□□□□ -1.18
TRA2B-212ENST00000480461 LRP1Q07954 4544 aaKnown RBP7.66□□□□□ -1.18
TRA2B-212ENST00000480461 MYMXA0A1B0GTQ4 84 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms